RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 TCERG1O14776 1098 aaKnown RBP34.99■■■■□ 3.19
KTN1-215ENST00000554567 ITGBL1O95965 494 aaPredicted RBP34.99■■■■□ 3.19
KTN1-215ENST00000554567 CC2D2BQ6DHV5 1058 aa34.97■■■■□ 3.19
KTN1-215ENST00000554567 TSPYL4Q9UJ04 414 aa34.97■■■■□ 3.19
KTN1-215ENST00000554567 GJA3Q9Y6H8 435 aa34.97■■■■□ 3.19
KTN1-215ENST00000554567 CNTNAP1P78357 1384 aa34.97■■■■□ 3.19
KTN1-215ENST00000554567 TMEM88BA6NKF7 163 aa34.96■■■■□ 3.19
KTN1-215ENST00000554567 HOXA10P31260 410 aaPredicted RBP34.96■■■■□ 3.19
KTN1-215ENST00000554567 PNMA8AQ86V59 439 aaPredicted RBP34.96■■■■□ 3.19
KTN1-215ENST00000554567 ZNF34Q8IZ26 560 aa34.96■■■■□ 3.19
KTN1-215ENST00000554567 GPC2Q8N158 579 aa34.96■■■■□ 3.19
KTN1-215ENST00000554567 EIF2S2P20042 333 aaKnown RBP34.95■■■■□ 3.19
KTN1-215ENST00000554567 MAP1SQ66K74 1059 aaPredicted RBP34.95■■■■□ 3.19
KTN1-215ENST00000554567 GIGYF2Q6Y7W6 1299 aaKnown RBP34.95■■■■□ 3.19
KTN1-215ENST00000554567 RBM17Q96I25 401 aaKnown RBP34.95■■■■□ 3.19
KTN1-215ENST00000554567 EIF6P56537 245 aaKnown RBP34.94■■■■□ 3.18
KTN1-215ENST00000554567 SNED1Q8TER0 1413 aa34.93■■■■□ 3.18
KTN1-215ENST00000554567 SLC51AQ86UW1 340 aa34.93■■■■□ 3.18
KTN1-215ENST00000554567 CNTROBQ8N137 903 aa34.93■■■■□ 3.18
KTN1-215ENST00000554567 IBTKQ9P2D0 1353 aaPredicted RBP34.92■■■■□ 3.18
KTN1-215ENST00000554567 NTSR2O95665 410 aa34.92■■■■□ 3.18
KTN1-215ENST00000554567 C3orf67Q6ZVT6 689 aa34.92■■■■□ 3.18
KTN1-215ENST00000554567 PPP1R42Q7Z4L9 355 aa34.92■■■■□ 3.18
KTN1-215ENST00000554567 LARGE2Q8N3Y3 721 aa34.92■■■■□ 3.18
KTN1-215ENST00000554567 CRAMP1Q96RY5 1269 aa34.92■■■■□ 3.18
KTN1-215ENST00000554567 ERBB4Q15303 1308 aa34.91■■■■□ 3.18
KTN1-215ENST00000554567 PPEF1O14829 653 aaPredicted RBP34.91■■■■□ 3.18
KTN1-215ENST00000554567 VEGFBP49765 207 aa34.91■■■■□ 3.18
KTN1-215ENST00000554567 RIPK4P57078 832 aa34.91■■■■□ 3.18
KTN1-215ENST00000554567 FOXN1O15353 648 aa34.89■■■■□ 3.18
KTN1-215ENST00000554567 RIC1Q4ADV7 1423 aa34.89■■■■□ 3.18
KTN1-215ENST00000554567 COL4A5P29400 1685 aa34.89■■■■□ 3.18
KTN1-215ENST00000554567 ANXA1P04083 346 aa34.88■■■■□ 3.17
KTN1-215ENST00000554567 LMOD1P29536 600 aaPredicted RBP34.88■■■■□ 3.17
KTN1-215ENST00000554567 GRIPAP1Q4V328 841 aa34.88■■■■□ 3.17
KTN1-215ENST00000554567 NLRP3Q96P20 1036 aa34.88■■■■□ 3.17
KTN1-215ENST00000554567 PDIA6Q15084 440 aa34.87■■■■□ 3.17
KTN1-215ENST00000554567 PARP10Q53GL7 1025 aa34.87■■■■□ 3.17
KTN1-215ENST00000554567 ADAMTSL1Q8N6G6 1762 aa34.87■■■■□ 3.17
KTN1-215ENST00000554567 PROSER3Q2NL68 480 aa34.86■■■■□ 3.17
KTN1-215ENST00000554567 NECTIN2Q92692 538 aa34.86■■■■□ 3.17
KTN1-215ENST00000554567 UTP14AQ9BVJ6 771 aaKnown RBP34.86■■■■□ 3.17
KTN1-215ENST00000554567 LRP10Q7Z4F1 713 aa34.85■■■■□ 3.17
KTN1-215ENST00000554567 TMX4Q9H1E5 349 aaPredicted RBP34.85■■■■□ 3.17
KTN1-215ENST00000554567 NIM1KQ8IY84 436 aa34.84■■■■□ 3.17
KTN1-215ENST00000554567 AIDAQ96BJ3 306 aa34.84■■■■□ 3.17
KTN1-215ENST00000554567 EPS15P42566 896 aa34.83■■■■□ 3.17
KTN1-215ENST00000554567 PPIP5K2O43314 1243 aa34.82■■■■□ 3.16
KTN1-215ENST00000554567 AIMP1Q12904 312 aaKnown RBP34.82■■■■□ 3.16
KTN1-215ENST00000554567 DEFB115Q30KQ5 88 aa34.82■■■■□ 3.16
KTN1-215ENST00000554567 ABT1Q9ULW3 272 aaKnown RBP34.81■■■■□ 3.16
KTN1-215ENST00000554567 TMPOP42166 694 aaKnown RBP34.8■■■■□ 3.16
KTN1-215ENST00000554567 SCNN1DP51172 638 aa34.8■■■■□ 3.16
KTN1-215ENST00000554567 AOC3Q16853 763 aa34.8■■■■□ 3.16
KTN1-215ENST00000554567 SLC10A5Q5PT55 438 aa34.8■■■■□ 3.16
KTN1-215ENST00000554567 COPS6Q7L5N1 327 aa34.8■■■■□ 3.16
KTN1-215ENST00000554567 ATP6V0A2Q9Y487 856 aa34.8■■■■□ 3.16
KTN1-215ENST00000554567 NEUROD2Q15784 382 aa34.79■■■■□ 3.16
KTN1-215ENST00000554567 LTBP1Q14766 1721 aa34.78■■■■□ 3.16
KTN1-215ENST00000554567 LMOD3Q0VAK6 560 aa34.78■■■■□ 3.16
KTN1-215ENST00000554567 DDX21Q9NR30 783 aaKnown RBP eCLIP34.78■■■■□ 3.16
KTN1-215ENST00000554567 BABAM1Q9NWV8 329 aa34.78■■■■□ 3.16
KTN1-215ENST00000554567 RASSF10A6NK89 507 aa34.77■■■■□ 3.16
KTN1-215ENST00000554567 CTCFP49711 727 aaPredicted RBP34.77■■■■□ 3.16
KTN1-215ENST00000554567 FMR1Q06787 632 aaKnown RBP eCLIP34.77■■■■□ 3.164e-6■■□□□ 12.4
KTN1-215ENST00000554567 RALBP1Q15311 655 aa34.77■■■■□ 3.16
KTN1-215ENST00000554567 XAGE3Q8WTP9 111 aa34.77■■■■□ 3.16
KTN1-215ENST00000554567 ABCC4O15439 1325 aa34.77■■■■□ 3.16
KTN1-215ENST00000554567 HCLS1P14317 486 aaPredicted RBP34.76■■■■□ 3.16
KTN1-215ENST00000554567 CCDC146Q8IYE0 955 aa34.75■■■■□ 3.15
KTN1-215ENST00000554567 PRDM10Q9NQV6 1147 aa34.75■■■■□ 3.15
KTN1-215ENST00000554567 WBP1LQ9NX94 342 aa34.75■■■■□ 3.15
KTN1-215ENST00000554567 HSP90AB3PQ58FF7 597 aa34.74■■■■□ 3.15
KTN1-215ENST00000554567 NLRP10Q86W26 655 aa34.74■■■■□ 3.15
KTN1-215ENST00000554567 ZNF428Q96B54 188 aa34.74■■■■□ 3.15
KTN1-215ENST00000554567 LAS1LQ9Y4W2 734 aaKnown RBP34.74■■■■□ 3.15
KTN1-215ENST00000554567 WDR33Q9C0J8 1336 aaKnown RBP34.74■■■■□ 3.15
KTN1-215ENST00000554567 USP50Q70EL3 339 aaPredicted RBP34.73■■■■□ 3.15
KTN1-215ENST00000554567 BBOX1O75936 387 aa34.72■■■■□ 3.15
KTN1-215ENST00000554567 KRT24Q2M2I5 525 aa34.72■■■■□ 3.15
KTN1-215ENST00000554567 DPP8Q6V1X1 898 aaPredicted RBP34.72■■■■□ 3.15
KTN1-215ENST00000554567 SUPT20HQ8NEM7 779 aa34.72■■■■□ 3.15
KTN1-215ENST00000554567 TRMT112Q9UI30 125 aaKnown RBP34.72■■■■□ 3.15
KTN1-215ENST00000554567 LBX1P52954 281 aa34.71■■■■□ 3.15
KTN1-215ENST00000554567 PAXIP1Q6ZW49 1069 aaPredicted RBP34.71■■■■□ 3.15
KTN1-215ENST00000554567 VPS33BQ9H267 617 aa34.71■■■■□ 3.15
KTN1-215ENST00000554567 ZNRF3Q9ULT6 936 aa34.71■■■■□ 3.15
KTN1-215ENST00000554567 CXCL9Q07325 125 aa34.7■■■■□ 3.15
KTN1-215ENST00000554567 TCIRG1Q13488 830 aa34.7■■■■□ 3.15
KTN1-215ENST00000554567 SP8Q8IXZ3 490 aa34.7■■■■□ 3.15
KTN1-215ENST00000554567 MPNDQ8N594 471 aa34.7■■■■□ 3.15
KTN1-215ENST00000554567 TRAF5O00463 557 aa34.69■■■■□ 3.14
KTN1-215ENST00000554567 DDX46Q7L014 1031 aaKnown RBP34.69■■■■□ 3.14
KTN1-215ENST00000554567 GPRC5DQ9NZD1 345 aa34.69■■■■□ 3.14
KTN1-215ENST00000554567 GRM1Q13255 1194 aa34.68■■■■□ 3.14
KTN1-215ENST00000554567 RTFDC1Q9BY42 306 aaPredicted RBP34.68■■■■□ 3.14
KTN1-215ENST00000554567 SH3TC1Q8TE82 1336 aa34.67■■■■□ 3.14
KTN1-215ENST00000554567 ADARB2Q9NS39 739 aaKnown RBP34.67■■■■□ 3.14
KTN1-215ENST00000554567 ANKRD36CQ5JPF3 1778 aa34.67■■■■□ 3.14
KTN1-215ENST00000554567 CHL1O00533 1208 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms