RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ARHGAP27Q6ZUM4 889 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 ZNF34Q8IZ26 560 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 TTLL6Q8N841 843 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 NYXQ9GZU5 481 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 ZBTB3Q9H5J0 574 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 UBN2Q6ZU65 1347 aa9.78□□□□□ -0.84
LINC00640-201ENST00000554409 SLX4Q8IY92 1834 aa9.77□□□□□ -0.84
LINC00640-201ENST00000554409 GOLGB1Q14789 3259 aaKnown RBP9.77□□□□□ -0.85
LINC00640-201ENST00000554409 TIAM2Q8IVF5 1701 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 ANXA1P04083 346 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 SRGNP10124 158 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 WWC1Q8IX03 1113 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 CCDC24Q8N4L8 307 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 MASTLQ96GX5 879 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 CHPF2Q9P2E5 772 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 DBF4Q9UBU7 674 aaPredicted RBP9.77□□□□□ -0.85
LINC00640-201ENST00000554409 DICER1Q9UPY3 1922 aaKnown RBP9.77□□□□□ -0.85
LINC00640-201ENST00000554409 LAMB2P55268 1798 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 IL16Q14005 1332 aa9.77□□□□□ -0.85
LINC00640-201ENST00000554409 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
LINC00640-201ENST00000554409 PARP10Q53GL7 1025 aa9.76□□□□□ -0.85
LINC00640-201ENST00000554409 COPS6Q7L5N1 327 aa9.76□□□□□ -0.85
LINC00640-201ENST00000554409 XAGE3Q8WTP9 111 aa9.76□□□□□ -0.85
LINC00640-201ENST00000554409 NECTIN2Q92692 538 aa9.76□□□□□ -0.85
LINC00640-201ENST00000554409 CNKSR1Q969H4 720 aa9.76□□□□□ -0.85
LINC00640-201ENST00000554409 RNF123Q5XPI4 1314 aa9.76□□□□□ -0.85
LINC00640-201ENST00000554409 ABCC12Q96J65 1359 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 NTSR2O95665 410 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 NPR1P16066 1061 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 GPTP24298 496 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 CRY2Q49AN0 593 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 HSP90AB3PQ58FF7 597 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 SUSD4Q5VX71 490 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 PPP1R42Q7Z4L9 355 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 ZNF622Q969S3 477 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC00640-201ENST00000554409 CHMP4AQ9BY43 222 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 HYPKQ9NX55 129 aa9.75□□□□□ -0.85
LINC00640-201ENST00000554409 ZC3H4Q9UPT8 1303 aaKnown RBP9.75□□□□□ -0.85
LINC00640-201ENST00000554409 CACNA1FO60840 1977 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 FAM177BA6PVY3 158 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 GTF2E1P29083 439 aaPredicted RBP9.74□□□□□ -0.85
LINC00640-201ENST00000554409 EVX2Q03828 476 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 AIMP1Q12904 312 aaKnown RBP9.74□□□□□ -0.85
LINC00640-201ENST00000554409 TCIRG1Q13488 830 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 ERFEQ4G0M1 354 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 SOGA3Q5TF21 947 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 C9orf131Q5VYM1 1079 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 PRPF40BQ6NWY9 871 aaKnown RBP9.74□□□□□ -0.85
LINC00640-201ENST00000554409 WDR63Q8IWG1 891 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 C8orf58Q8NAV2 365 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 PLBD2Q8NHP8 589 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 LTBP3Q9NS15 1303 aa9.74□□□□□ -0.85
LINC00640-201ENST00000554409 DDX60Q8IY21 1712 aaKnown RBP9.73□□□□□ -0.85
LINC00640-201ENST00000554409 NFKBIEO00221 500 aa9.73□□□□□ -0.85
LINC00640-201ENST00000554409 RASSF7Q02833 373 aa9.73□□□□□ -0.85
LINC00640-201ENST00000554409 ANKRD13DQ6ZTN6 518 aa9.73□□□□□ -0.85
LINC00640-201ENST00000554409 NUTM1Q86Y26 1132 aa9.73□□□□□ -0.85
LINC00640-201ENST00000554409 C7orf43Q8WVR3 580 aa9.73□□□□□ -0.85
LINC00640-201ENST00000554409 GPBP1L1Q9HC44 474 aaPredicted RBP9.73□□□□□ -0.85
LINC00640-201ENST00000554409 ELL2O00472 640 aaPredicted RBP9.72□□□□□ -0.85
LINC00640-201ENST00000554409 C21orf2O43822 256 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 LMNB1P20700 586 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 ALDH1B1P30837 517 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 SLC10A5Q5PT55 438 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 CCDC30Q5VVM6 783 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 NLRP10Q86W26 655 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 FAM9BQ8IZU0 186 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 TSPYL6Q8N831 410 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 TSR2Q969E8 191 aaKnown RBP9.72□□□□□ -0.85
LINC00640-201ENST00000554409 UTP14AQ9BVJ6 771 aaKnown RBP9.72□□□□□ -0.85
LINC00640-201ENST00000554409 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
LINC00640-201ENST00000554409 RNF181Q9P0P0 153 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 SNED1Q8TER0 1413 aa9.72□□□□□ -0.85
LINC00640-201ENST00000554409 SENP3-EIF4A1A0A087X0R7 540 aa9.71□□□□□ -0.86
LINC00640-201ENST00000554409 HOXA10P31260 410 aaPredicted RBP9.71□□□□□ -0.86
LINC00640-201ENST00000554409 CLCN6P51797 869 aa9.71□□□□□ -0.86
LINC00640-201ENST00000554409 PRELPP51888 382 aa9.71□□□□□ -0.86
LINC00640-201ENST00000554409 ISCA1Q9BUE6 129 aa9.71□□□□□ -0.86
LINC00640-201ENST00000554409 PHAXQ9H814 394 aaKnown RBP9.71□□□□□ -0.86
LINC00640-201ENST00000554409 FANCIQ9NVI1 1328 aa9.71□□□□□ -0.86
LINC00640-201ENST00000554409 C1QTNF8P60827 252 aa9.7□□□□□ -0.86
LINC00640-201ENST00000554409 GOLGA2Q08379 1002 aa9.7□□□□□ -0.86
LINC00640-201ENST00000554409 TRIM28Q13263 835 aaKnown RBP9.7□□□□□ -0.86
LINC00640-201ENST00000554409 TWISTNBQ3B726 338 aaPredicted RBP9.7□□□□□ -0.86
LINC00640-201ENST00000554409 CCDC93Q567U6 631 aa9.7□□□□□ -0.86
LINC00640-201ENST00000554409 IFNLR1Q8IU57 520 aaPredicted RBP9.7□□□□□ -0.86
LINC00640-201ENST00000554409 ZNF526Q8TF50 670 aaPredicted RBP9.7□□□□□ -0.86
LINC00640-201ENST00000554409 RPGRQ92834 1020 aaKnown RBP9.7□□□□□ -0.86
LINC00640-201ENST00000554409 CRAMP1Q96RY5 1269 aa9.7□□□□□ -0.86
LINC00640-201ENST00000554409 TAOK3Q9H2K8 898 aa9.7□□□□□ -0.86
LINC00640-201ENST00000554409 TRMT112Q9UI30 125 aaKnown RBP9.7□□□□□ -0.86
LINC00640-201ENST00000554409 SH3TC1Q8TE82 1336 aa9.7□□□□□ -0.86
LINC00640-201ENST00000554409 LRRC37AA6NMS7 1700 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 CCER2I3L3R5 266 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 KIF3CO14782 793 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 DDX58O95786 925 aaKnown RBP9.69□□□□□ -0.86
LINC00640-201ENST00000554409 NUBP1P53384 320 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 CC2D2BQ6DHV5 1058 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
LINC00640-201ENST00000554409 RIC3Q7Z5B4 369 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms