RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 RIPOR1Q6ZS17 1223 aa8.83□□□□□ -1
CHD8-207ENST00000554384 BTLAQ7Z6A9 289 aa8.83□□□□□ -1
CHD8-207ENST00000554384 RGL4Q8IZJ4 473 aa8.83□□□□□ -1
CHD8-207ENST00000554384 RBCK1Q9BYM8 510 aa8.83□□□□□ -1
CHD8-207ENST00000554384 CUEDC1Q9NWM3 386 aaPredicted RBP8.83□□□□□ -1
CHD8-207ENST00000554384 IGHA2P01877 340 aa8.82□□□□□ -1
CHD8-207ENST00000554384 MZF1P28698 734 aaPredicted RBP8.82□□□□□ -1
CHD8-207ENST00000554384 INPP5BP32019 993 aa8.82□□□□□ -1
CHD8-207ENST00000554384 NUDT16Q96DE0 195 aaKnown RBP8.82□□□□□ -1
CHD8-207ENST00000554384 CNTNAP3BQ96NU0 1288 aa8.82□□□□□ -1
CHD8-207ENST00000554384 CNTNAP3Q9BZ76 1288 aa8.82□□□□□ -1
CHD8-207ENST00000554384 SLC35F4A4IF30 521 aa8.81□□□□□ -1
CHD8-207ENST00000554384 UNCXA6NJT0 531 aa8.81□□□□□ -1
CHD8-207ENST00000554384 GPR182O15218 404 aa8.81□□□□□ -1
CHD8-207ENST00000554384 ZSCAN29Q8IWY8 852 aaPredicted RBP8.81□□□□□ -1
CHD8-207ENST00000554384 BCL2L13Q9BXK5 485 aa8.81□□□□□ -1
CHD8-207ENST00000554384 ZCCHC2Q9C0B9 1178 aaKnown RBP8.81□□□□□ -1
CHD8-207ENST00000554384 CRISPLD1Q9H336 500 aa8.81□□□□□ -1
CHD8-207ENST00000554384 GJA3Q9Y6H8 435 aa8.81□□□□□ -1
CHD8-207ENST00000554384 P4HBP07237 508 aaKnown RBP8.8□□□□□ -1
CHD8-207ENST00000554384 C8orf34Q49A92 452 aa8.8□□□□□ -1
CHD8-207ENST00000554384 CMTR1Q8N1G2 835 aaKnown RBP8.8□□□□□ -1
CHD8-207ENST00000554384 PGBD3Q8N328 593 aa8.8□□□□□ -1
CHD8-207ENST00000554384 CCDC155Q8N6L0 562 aa8.8□□□□□ -1
CHD8-207ENST00000554384 GIPC2Q8TF65 315 aa8.8□□□□□ -1
CHD8-207ENST00000554384 CEP63Q96MT8 703 aa8.8□□□□□ -1
CHD8-207ENST00000554384 NIF3L1Q9GZT8 377 aa8.8□□□□□ -1
CHD8-207ENST00000554384 ANKIB1Q9P2G1 1089 aa8.8□□□□□ -1
CHD8-207ENST00000554384 RTCBQ9Y3I0 505 aaKnown RBP8.8□□□□□ -1
CHD8-207ENST00000554384 TYRO3Q06418 890 aa8.79□□□□□ -1
CHD8-207ENST00000554384 KCNMA1Q12791 1236 aa8.79□□□□□ -1
CHD8-207ENST00000554384 GRIN2CQ14957 1233 aa8.79□□□□□ -1
CHD8-207ENST00000554384 DBN1Q16643 649 aa8.79□□□□□ -1
CHD8-207ENST00000554384 IER5Q5VY09 327 aa8.79□□□□□ -1
CHD8-207ENST00000554384 FBXO33Q7Z6M2 555 aa8.79□□□□□ -1
CHD8-207ENST00000554384 GJD3Q8N144 294 aa8.79□□□□□ -1
CHD8-207ENST00000554384 NANOS1Q8WY41 292 aaKnown RBP8.79□□□□□ -1
CHD8-207ENST00000554384 SETDB2Q96T68 719 aa8.79□□□□□ -1
CHD8-207ENST00000554384 FAM129BQ96TA1 746 aa8.79□□□□□ -1
CHD8-207ENST00000554384 COL25A1Q9BXS0 654 aaPredicted RBP8.79□□□□□ -1
CHD8-207ENST00000554384 HCN2Q9UL51 889 aa8.79□□□□□ -1
CHD8-207ENST00000554384 GPC6Q9Y625 555 aaPredicted RBP8.79□□□□□ -1
CHD8-207ENST00000554384 TREHO43280 583 aa8.78□□□□□ -1
CHD8-207ENST00000554384 ZNF16P17020 682 aaPredicted RBP8.78□□□□□ -1
CHD8-207ENST00000554384 DSC3Q14574 896 aa8.78□□□□□ -1
CHD8-207ENST00000554384 TRIP4Q15650 581 aaPredicted RBP8.78□□□□□ -1
CHD8-207ENST00000554384 RNFT1Q5M7Z0 435 aa8.78□□□□□ -1
CHD8-207ENST00000554384 RNF19AQ9NV58 838 aa8.78□□□□□ -1
CHD8-207ENST00000554384 AMOTL2Q9Y2J4 779 aa8.78□□□□□ -1
CHD8-207ENST00000554384 RBM47A0AV96 593 aaKnown RBP8.77□□□□□ -1.01
CHD8-207ENST00000554384 ERCC3P19447 782 aa8.77□□□□□ -1.01
CHD8-207ENST00000554384 ARSDP51689 593 aa8.77□□□□□ -1.01
CHD8-207ENST00000554384 PLCB3Q01970 1234 aa8.77□□□□□ -1.01
CHD8-207ENST00000554384 SFSWAPQ12872 951 aaKnown RBP8.77□□□□□ -1.01
CHD8-207ENST00000554384 HIF1AQ16665 826 aa8.77□□□□□ -1.01
CHD8-207ENST00000554384 PIK3R5Q8WYR1 880 aa8.77□□□□□ -1.01
CHD8-207ENST00000554384 WWC3Q9ULE0 1092 aa8.77□□□□□ -1.01
CHD8-207ENST00000554384 KCNMB2Q9Y691 235 aa8.77□□□□□ -1.01
CHD8-207ENST00000554384 DCDC2BA2VCK2 349 aa8.76□□□□□ -1.01
CHD8-207ENST00000554384 EHHADHQ08426 723 aa8.76□□□□□ -1.01
CHD8-207ENST00000554384 ORC1Q13415 861 aa8.76□□□□□ -1.01
CHD8-207ENST00000554384 UBAP2LQ14157 1087 aaKnown RBP8.76□□□□□ -1.01
CHD8-207ENST00000554384 CITED4Q96RK1 184 aa8.76□□□□□ -1.01
CHD8-207ENST00000554384 STRN4Q9NRL3 753 aa8.76□□□□□ -1.01
CHD8-207ENST00000554384 ADAMTS8Q9UP79 889 aa8.76□□□□□ -1.01
CHD8-207ENST00000554384 MAPK8P45983 427 aa8.75□□□□□ -1.01
CHD8-207ENST00000554384 EFHC2Q5JST6 749 aa8.75□□□□□ -1.01
CHD8-207ENST00000554384 NLRP8Q86W28 1048 aa8.75□□□□□ -1.01
CHD8-207ENST00000554384 VWA5B2Q8N398 1253 aa8.75□□□□□ -1.01
CHD8-207ENST00000554384 NUCKS1Q9H1E3 243 aaKnown RBP8.75□□□□□ -1.01
CHD8-207ENST00000554384 BRD7Q9NPI1 651 aa8.75□□□□□ -1.01
CHD8-207ENST00000554384 KHNYNO15037 678 aaKnown RBP8.74□□□□□ -1.01
CHD8-207ENST00000554384 ATXN7O15265 892 aaPredicted RBP8.74□□□□□ -1.01
CHD8-207ENST00000554384 ITGA6P23229 1130 aa8.74□□□□□ -1.01
CHD8-207ENST00000554384 FMR1Q06787 632 aaKnown RBP eCLIP8.74□□□□□ -1.01
CHD8-207ENST00000554384 PDE3BQ13370 1112 aa8.74□□□□□ -1.01
CHD8-207ENST00000554384 EAPPQ56P03 285 aaPredicted RBP8.74□□□□□ -1.01
CHD8-207ENST00000554384 WHAMMQ8TF30 809 aa8.74□□□□□ -1.01
CHD8-207ENST00000554384 DMRTB1Q96MA1 342 aa8.74□□□□□ -1.01
CHD8-207ENST00000554384 FOXD3Q9UJU5 478 aaPredicted RBP8.74□□□□□ -1.01
CHD8-207ENST00000554384 UBAP1LF5GYI3 381 aa8.73□□□□□ -1.01
CHD8-207ENST00000554384 BNIP3LO60238 219 aa8.73□□□□□ -1.01
CHD8-207ENST00000554384 ZNF385CQ66K41 422 aaPredicted RBP8.73□□□□□ -1.01
CHD8-207ENST00000554384 GTPBP3Q969Y2 492 aaKnown RBP8.73□□□□□ -1.01
CHD8-207ENST00000554384 KIAA1522Q9P206 1035 aaPredicted RBP8.73□□□□□ -1.01
CHD8-207ENST00000554384 XYLBO75191 536 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 PCSK2P16519 638 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 USP5P45974 858 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 TNP2Q05952 138 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 SAMD5Q5TGI4 173 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 USPL1Q5W0Q7 1092 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 KRT25Q7Z3Z0 450 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 TRIM22Q8IYM9 498 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 ZNF837Q96EG3 531 aaPredicted RBP8.72□□□□□ -1.01
CHD8-207ENST00000554384 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 FAM13BQ9NYF5 915 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 PCDHGC4Q9Y5F7 938 aa8.72□□□□□ -1.01
CHD8-207ENST00000554384 CDC14CA4D256 554 aa8.71□□□□□ -1.02
CHD8-207ENST00000554384 GPR25O00155 361 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms