RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ZIC5Q96T25 663 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 RUBCNLQ9H714 662 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 SENP2Q9HC62 589 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 BCS1LQ9Y276 419 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 DYRK1BQ9Y463 629 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 GJA3Q9Y6H8 435 aa8.08□□□□□ -1.12
MTHFD1-206ENST00000554353 A0A1W2PNR3 127 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 F11P03951 625 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 ZAP70P43403 619 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 RIPOR1Q6ZS17 1223 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 TREML1Q86YW5 311 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 CCDC87Q9NVE4 849 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 ANKIB1Q9P2G1 1089 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 DCTN4Q9UJW0 460 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 BRPF3Q9ULD4 1205 aa8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 GPC6Q9Y625 555 aaPredicted RBP8.07□□□□□ -1.12
MTHFD1-206ENST00000554353 NDUFB5O43674 189 aa8.06□□□□□ -1.12
MTHFD1-206ENST00000554353 MICAL2O94851 1124 aa8.06□□□□□ -1.12
MTHFD1-206ENST00000554353 TMC1Q8TDI8 760 aa8.06□□□□□ -1.12
MTHFD1-206ENST00000554353 KIFC2Q96AC6 838 aa8.06□□□□□ -1.12
MTHFD1-206ENST00000554353 ARHGEF11O15085 1522 aa8.06□□□□□ -1.12
MTHFD1-206ENST00000554353 POLA1P09884 1462 aaPredicted RBP8.06□□□□□ -1.12
MTHFD1-206ENST00000554353 SENP3-EIF4A1A0A087X0R7 540 aa8.05□□□□□ -1.12
MTHFD1-206ENST00000554353 TGFBR3LH3BV60 316 aa8.05□□□□□ -1.12
MTHFD1-206ENST00000554353 PTSQ03393 145 aa8.05□□□□□ -1.12
MTHFD1-206ENST00000554353 DNM1Q05193 864 aaKnown RBP8.05□□□□□ -1.12
MTHFD1-206ENST00000554353 RAD54L2Q9Y4B4 1467 aa8.05□□□□□ -1.12
MTHFD1-206ENST00000554353 ANKRD33BA6NCL7 494 aa8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 FZD6O60353 706 aa8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 IDH3AP50213 366 aa8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 CYB5RLQ6IPT4 315 aa8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 DNAJC14Q6Y2X3 702 aaPredicted RBP8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 ZSCAN29Q8IWY8 852 aaPredicted RBP8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 GPR152Q8TDT2 470 aa8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 EDEM1Q92611 657 aa8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
MTHFD1-206ENST00000554353 SOGA1O94964 1423 aa8.03□□□□□ -1.12
MTHFD1-206ENST00000554353 EFHC2Q5JST6 749 aa8.03□□□□□ -1.12
MTHFD1-206ENST00000554353 CEP63Q96MT8 703 aa8.03□□□□□ -1.12
MTHFD1-206ENST00000554353 CRISPLD1Q9H336 500 aa8.03□□□□□ -1.12
MTHFD1-206ENST00000554353 TDRD9Q8NDG6 1382 aaKnown RBP8.02□□□□□ -1.13
MTHFD1-206ENST00000554353 SLC35F4A4IF30 521 aa8.02□□□□□ -1.13
MTHFD1-206ENST00000554353 IER5Q5VY09 327 aa8.02□□□□□ -1.13
MTHFD1-206ENST00000554353 BTLAQ7Z6A9 289 aa8.02□□□□□ -1.13
MTHFD1-206ENST00000554353 CCDC155Q8N6L0 562 aa8.02□□□□□ -1.13
MTHFD1-206ENST00000554353 DMGDHQ9UI17 866 aaKnown RBP8.02□□□□□ -1.13
MTHFD1-206ENST00000554353 FAM181BA6NEQ2 426 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 OPLAHO14841 1288 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 PDGFAP04085 211 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 PCSK2P16519 638 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 MZF1P28698 734 aaPredicted RBP8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 ARSDP51689 593 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 TMC7Q7Z402 723 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 RGL4Q8IZJ4 473 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 TTC16Q8NEE8 873 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 NUDT16Q96DE0 195 aaKnown RBP8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 ASB16Q96NS5 453 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 RBCK1Q9BYM8 510 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 FAM13BQ9NYF5 915 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 USP20Q9Y2K6 914 aa8.01□□□□□ -1.13
MTHFD1-206ENST00000554353 FGD5Q6ZNL6 1462 aa8□□□□□ -1.13
MTHFD1-206ENST00000554353 CUX1P39880 1505 aa8□□□□□ -1.13
MTHFD1-206ENST00000554353 ERCC3P19447 782 aa8□□□□□ -1.13
MTHFD1-206ENST00000554353 NLRP8Q86W28 1048 aa8□□□□□ -1.13
MTHFD1-206ENST00000554353 CMTR1Q8N1G2 835 aaKnown RBP8□□□□□ -1.13
MTHFD1-206ENST00000554353 PIK3R5Q8WYR1 880 aa8□□□□□ -1.13
MTHFD1-206ENST00000554353 NUCKS1Q9H1E3 243 aaKnown RBP8□□□□□ -1.13
MTHFD1-206ENST00000554353 INPP5BP32019 993 aa7.99□□□□□ -1.13
MTHFD1-206ENST00000554353 C8orf34Q49A92 452 aa7.99□□□□□ -1.13
MTHFD1-206ENST00000554353 CITED4Q96RK1 184 aa7.99□□□□□ -1.13
MTHFD1-206ENST00000554353 ZCCHC2Q9C0B9 1178 aaKnown RBP7.99□□□□□ -1.13
MTHFD1-206ENST00000554353 H7C1W4 665 aa7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 USP5P45974 858 aa7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 TYRO3Q06418 890 aa7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 PDE3BQ13370 1112 aa7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 LCE2CQ5TA81 110 aa7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 BRD7Q9NPI1 651 aa7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 CUEDC1Q9NWM3 386 aaPredicted RBP7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 RTCBQ9Y3I0 505 aaKnown RBP7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 WDR97A6NE52 1622 aa7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 SNAPC4Q5SXM2 1469 aa7.98□□□□□ -1.13
MTHFD1-206ENST00000554353 A6NHS1 94 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 KHNYNO15037 678 aaKnown RBP7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 ATXN7O15265 892 aaPredicted RBP7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 EPB42P16452 691 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 LBRQ14739 615 aaKnown RBP7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 DBN1Q16643 649 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 FIGNL1Q6PIW4 674 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 NPAS4Q8IUM7 802 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 GJD3Q8N144 294 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 ZNF428Q96B54 188 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 GGNBP2Q9H3C7 697 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 ARAP1Q96P48 1450 aa7.97□□□□□ -1.13
MTHFD1-206ENST00000554353 PBRM1Q86U86 1689 aa7.96□□□□□ -1.13
MTHFD1-206ENST00000554353 DCDC2BA2VCK2 349 aa7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 THBS1P07996 1170 aa7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 ITGA6P23229 1130 aa7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 RBM25P49756 843 aaKnown RBP7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 SAMD5Q5TGI4 173 aa7.96□□□□□ -1.14
MTHFD1-206ENST00000554353 TRIM22Q8IYM9 498 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms