RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 PPP1R42Q7Z4L9 355 aa13□□□□□ -0.33
ACTN1-210ENST00000553779 AIDAQ96BJ3 306 aa13□□□□□ -0.33
ACTN1-210ENST00000553779 RBM17Q96I25 401 aaKnown RBP13□□□□□ -0.33
ACTN1-210ENST00000553779 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
ACTN1-210ENST00000553779 TAF1DQ9H5J8 278 aaPredicted RBP13□□□□□ -0.33
ACTN1-210ENST00000553779 ERBB4Q15303 1308 aa12.99□□□□□ -0.33
ACTN1-210ENST00000553779 PPEF1O14829 653 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-210ENST00000553779 EPHX2P34913 555 aa12.99□□□□□ -0.33
ACTN1-210ENST00000553779 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
ACTN1-210ENST00000553779 LARGE2Q8N3Y3 721 aa12.99□□□□□ -0.33
ACTN1-210ENST00000553779 C7orf43Q8WVR3 580 aa12.99□□□□□ -0.33
ACTN1-210ENST00000553779 TAF1P21675 1872 aa12.99□□□□□ -0.33
ACTN1-210ENST00000553779 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-210ENST00000553779 RIPK4P57078 832 aa12.98□□□□□ -0.33
ACTN1-210ENST00000553779 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
ACTN1-210ENST00000553779 PNMA8AQ86V59 439 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-210ENST00000553779 GPC2Q8N158 579 aa12.98□□□□□ -0.33
ACTN1-210ENST00000553779 PSMD1Q99460 953 aa12.98□□□□□ -0.33
ACTN1-210ENST00000553779 RIC1Q4ADV7 1423 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 ADAMTSL1Q8N6G6 1762 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 UBN2Q6ZU65 1347 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 TMEM88BA6NKF7 163 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 CRY2Q49AN0 593 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 PAXIP1Q6ZW49 1069 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-210ENST00000553779 NIM1KQ8IY84 436 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 NECTIN2Q92692 538 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 NLRP3Q96P20 1036 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
ACTN1-210ENST00000553779 CNTNAP1P78357 1384 aa12.96□□□□□ -0.33
ACTN1-210ENST00000553779 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.33
ACTN1-210ENST00000553779 RALBP1Q15311 655 aa12.96□□□□□ -0.33
ACTN1-210ENST00000553779 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
ACTN1-210ENST00000553779 SUSD4Q5VX71 490 aa12.96□□□□□ -0.33
ACTN1-210ENST00000553779 GIGYF2Q6Y7W6 1299 aaKnown RBP12.96□□□□□ -0.33
ACTN1-210ENST00000553779 UTP14AQ9BVJ6 771 aaKnown RBP12.96□□□□□ -0.33
ACTN1-210ENST00000553779 ABT1Q9ULW3 272 aaKnown RBP12.96□□□□□ -0.33
ACTN1-210ENST00000553779 LAS1LQ9Y4W2 734 aaKnown RBP12.96□□□□□ -0.33
ACTN1-210ENST00000553779 PPIP5K2O43314 1243 aa12.95□□□□□ -0.34
ACTN1-210ENST00000553779 NTSR2O95665 410 aa12.95□□□□□ -0.34
ACTN1-210ENST00000553779 AIMP1Q12904 312 aaKnown RBP12.95□□□□□ -0.34
ACTN1-210ENST00000553779 HSP90AB3PQ58FF7 597 aa12.95□□□□□ -0.34
ACTN1-210ENST00000553779 FZD9O00144 591 aa12.94□□□□□ -0.34
ACTN1-210ENST00000553779 ANXA1P04083 346 aa12.94□□□□□ -0.34
ACTN1-210ENST00000553779 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-210ENST00000553779 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
ACTN1-210ENST00000553779 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
ACTN1-210ENST00000553779 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
ACTN1-210ENST00000553779 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-210ENST00000553779 GRM1Q13255 1194 aa12.93□□□□□ -0.34
ACTN1-210ENST00000553779 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
ACTN1-210ENST00000553779 CNTROBQ8N137 903 aa12.93□□□□□ -0.34
ACTN1-210ENST00000553779 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
ACTN1-210ENST00000553779 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
ACTN1-210ENST00000553779 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
ACTN1-210ENST00000553779 POLR2AP24928 1970 aaKnown RBP12.92□□□□□ -0.34
ACTN1-210ENST00000553779 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
ACTN1-210ENST00000553779 AOC3Q16853 763 aa12.92□□□□□ -0.34
ACTN1-210ENST00000553779 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-210ENST00000553779 DDX46Q7L014 1031 aaKnown RBP12.92□□□□□ -0.34
ACTN1-210ENST00000553779 BABAM1Q9NWV8 329 aa12.92□□□□□ -0.34
ACTN1-210ENST00000553779 COL4A5P29400 1685 aa12.92□□□□□ -0.34
ACTN1-210ENST00000553779 ABCC4O15439 1325 aa12.91□□□□□ -0.34
ACTN1-210ENST00000553779 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
ACTN1-210ENST00000553779 VEGFBP49765 207 aa12.91□□□□□ -0.34
ACTN1-210ENST00000553779 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
ACTN1-210ENST00000553779 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
ACTN1-210ENST00000553779 XAGE3Q8WTP9 111 aa12.91□□□□□ -0.34
ACTN1-210ENST00000553779 TRMT112Q9UI30 125 aaKnown RBP12.91□□□□□ -0.34
ACTN1-210ENST00000553779 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 FOXN1O15353 648 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-210ENST00000553779 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-210ENST00000553779 DEFB115Q30KQ5 88 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 HDGFL1Q5TGJ6 251 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 COPS6Q7L5N1 327 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 BEGAINQ9BUH8 593 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.34
ACTN1-210ENST00000553779 MYH3P11055 1940 aa12.9□□□□□ -0.35
ACTN1-210ENST00000553779 LRRC37AA6NMS7 1700 aa12.89□□□□□ -0.35
ACTN1-210ENST00000553779 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-210ENST00000553779 EPS15P42566 896 aa12.89□□□□□ -0.35
ACTN1-210ENST00000553779 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
ACTN1-210ENST00000553779 USP50Q70EL3 339 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-210ENST00000553779 MPNDQ8N594 471 aa12.89□□□□□ -0.35
ACTN1-210ENST00000553779 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
ACTN1-210ENST00000553779 SPEF2Q9C093 1822 aa12.89□□□□□ -0.35
ACTN1-210ENST00000553779 SCNN1DP51172 638 aa12.88□□□□□ -0.35
ACTN1-210ENST00000553779 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
ACTN1-210ENST00000553779 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
ACTN1-210ENST00000553779 DDX21Q9NR30 783 aaKnown RBP eCLIP12.88□□□□□ -0.35
ACTN1-210ENST00000553779 CHPF2Q9P2E5 772 aa12.88□□□□□ -0.35
ACTN1-210ENST00000553779 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
ACTN1-210ENST00000553779 BBOX1O75936 387 aa12.87□□□□□ -0.35
ACTN1-210ENST00000553779 ECE1P42892 770 aa12.87□□□□□ -0.35
ACTN1-210ENST00000553779 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-210ENST00000553779 TCIRG1Q13488 830 aa12.87□□□□□ -0.35
ACTN1-210ENST00000553779 GRAPQ13588 217 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms