RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 MKRN1Q9UHC7 482 aaKnown RBP20.75■□□□□ 0.91
ACTN1-209ENST00000553659 FZD9O00144 591 aa20.74■□□□□ 0.91
ACTN1-209ENST00000553659 KIF6Q6ZMV9 814 aa20.74■□□□□ 0.91
ACTN1-209ENST00000553659 TTLL7Q6ZT98 887 aa20.74■□□□□ 0.91
ACTN1-209ENST00000553659 PSMD1Q99460 953 aa20.74■□□□□ 0.91
ACTN1-209ENST00000553659 PNNQ9H307 717 aaKnown RBP20.74■□□□□ 0.91
ACTN1-209ENST00000553659 HACL1Q9UJ83 578 aa20.74■□□□□ 0.91
ACTN1-209ENST00000553659 ABCC12Q96J65 1359 aa20.73■□□□□ 0.91
ACTN1-209ENST00000553659 ITGBL1O95965 494 aaPredicted RBP20.73■□□□□ 0.91
ACTN1-209ENST00000553659 CC2D2BQ6DHV5 1058 aa20.73■□□□□ 0.91
ACTN1-209ENST00000553659 THUMPD2Q9BTF0 503 aaKnown RBP20.73■□□□□ 0.91
ACTN1-209ENST00000553659 ADAMTSL1Q8N6G6 1762 aa20.72■□□□□ 0.91
ACTN1-209ENST00000553659 SNED1Q8TER0 1413 aa20.72■□□□□ 0.91
ACTN1-209ENST00000553659 MYL6BP14649 208 aa20.72■□□□□ 0.91
ACTN1-209ENST00000553659 HOXA10P31260 410 aaPredicted RBP20.72■□□□□ 0.91
ACTN1-209ENST00000553659 EPHX2P34913 555 aa20.72■□□□□ 0.91
ACTN1-209ENST00000553659 EAPPQ56P03 285 aaPredicted RBP20.72■□□□□ 0.91
ACTN1-209ENST00000553659 IBTKQ9P2D0 1353 aaPredicted RBP20.72■□□□□ 0.91
ACTN1-209ENST00000553659 SUSD4Q5VX71 490 aa20.71■□□□□ 0.91
ACTN1-209ENST00000553659 PNMA8AQ86V59 439 aaPredicted RBP20.71■□□□□ 0.91
ACTN1-209ENST00000553659 GPC2Q8N158 579 aa20.71■□□□□ 0.91
ACTN1-209ENST00000553659 JDP2Q8WYK2 163 aa20.71■□□□□ 0.91
ACTN1-209ENST00000553659 RPGRQ92834 1020 aaKnown RBP20.71■□□□□ 0.91
ACTN1-209ENST00000553659 ZBTB3Q9H5J0 574 aa20.71■□□□□ 0.91
ACTN1-209ENST00000553659 CLEC11AQ9Y240 323 aa20.71■□□□□ 0.91
ACTN1-209ENST00000553659 CNTNAP1P78357 1384 aa20.71■□□□□ 0.91
ACTN1-209ENST00000553659 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 TMEM88BA6NKF7 163 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 CAPN15O75808 1086 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 GPTP24298 496 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 GRIPAP1Q4V328 841 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 ZNF34Q8IZ26 560 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 ADAMTS8Q9UP79 889 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 ERBB4Q15303 1308 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 UBN2Q6ZU65 1347 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 MAPK8IP3Q9UPT6 1336 aa20.7■□□□□ 0.9
ACTN1-209ENST00000553659 GIGYF2Q6Y7W6 1299 aaKnown RBP20.69■□□□□ 0.9
ACTN1-209ENST00000553659 RNF123Q5XPI4 1314 aa20.69■□□□□ 0.9
ACTN1-209ENST00000553659 RBM17Q96I25 401 aaKnown RBP20.68■□□□□ 0.9
ACTN1-209ENST00000553659 CRAMP1Q96RY5 1269 aa20.68■□□□□ 0.9
ACTN1-209ENST00000553659 EIF6P56537 245 aaKnown RBP20.67■□□□□ 0.9
ACTN1-209ENST00000553659 PPP1R42Q7Z4L9 355 aa20.67■□□□□ 0.9
ACTN1-209ENST00000553659 NTSR2O95665 410 aa20.66■□□□□ 0.9
ACTN1-209ENST00000553659 CNTROBQ8N137 903 aa20.66■□□□□ 0.9
ACTN1-209ENST00000553659 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
ACTN1-209ENST00000553659 COL4A5P29400 1685 aa20.66■□□□□ 0.9
ACTN1-209ENST00000553659 PARP10Q53GL7 1025 aa20.65■□□□□ 0.9
ACTN1-209ENST00000553659 PPEF1O14829 653 aaPredicted RBP20.64■□□□□ 0.89
ACTN1-209ENST00000553659 VEGFBP49765 207 aa20.64■□□□□ 0.89
ACTN1-209ENST00000553659 RIPK4P57078 832 aa20.64■□□□□ 0.89
ACTN1-209ENST00000553659 PDIA6Q15084 440 aa20.64■□□□□ 0.89
ACTN1-209ENST00000553659 MAP1SQ66K74 1059 aaPredicted RBP20.64■□□□□ 0.89
ACTN1-209ENST00000553659 LRP10Q7Z4F1 713 aa20.64■□□□□ 0.89
ACTN1-209ENST00000553659 LARGE2Q8N3Y3 721 aa20.64■□□□□ 0.89
ACTN1-209ENST00000553659 NLRP3Q96P20 1036 aa20.64■□□□□ 0.89
ACTN1-209ENST00000553659 BABAM1Q9NWV8 329 aa20.64■□□□□ 0.89
ACTN1-209ENST00000553659 GJA3Q9Y6H8 435 aa20.64■□□□□ 0.89
ACTN1-209ENST00000553659 FOXN1O15353 648 aa20.63■□□□□ 0.89
ACTN1-209ENST00000553659 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
ACTN1-209ENST00000553659 NCBP3Q53F19 620 aaKnown RBP20.63■□□□□ 0.89
ACTN1-209ENST00000553659 SLC10A5Q5PT55 438 aa20.63■□□□□ 0.89
ACTN1-209ENST00000553659 C3orf67Q6ZVT6 689 aa20.63■□□□□ 0.89
ACTN1-209ENST00000553659 ANKRD36CQ5JPF3 1778 aa20.62■□□□□ 0.89
ACTN1-209ENST00000553659 LTBP1Q14766 1721 aa20.62■□□□□ 0.89
ACTN1-209ENST00000553659 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
ACTN1-209ENST00000553659 LMOD1P29536 600 aaPredicted RBP20.62■□□□□ 0.89
ACTN1-209ENST00000553659 UTP14AQ9BVJ6 771 aaKnown RBP20.62■□□□□ 0.89
ACTN1-209ENST00000553659 DEFB115Q30KQ5 88 aa20.61■□□□□ 0.89
ACTN1-209ENST00000553659 TMX4Q9H1E5 349 aaPredicted RBP20.61■□□□□ 0.89
ACTN1-209ENST00000553659 LAMB2P55268 1798 aa20.61■□□□□ 0.89
ACTN1-209ENST00000553659 TRPM7Q96QT4 1865 aa20.6■□□□□ 0.89
ACTN1-209ENST00000553659 RASSF10A6NK89 507 aa20.6■□□□□ 0.89
ACTN1-209ENST00000553659 SCNN1DP51172 638 aa20.6■□□□□ 0.89
ACTN1-209ENST00000553659 NIM1KQ8IY84 436 aa20.6■□□□□ 0.89
ACTN1-209ENST00000553659 VPS33BQ9H267 617 aa20.6■□□□□ 0.89
ACTN1-209ENST00000553659 PRDM10Q9NQV6 1147 aa20.6■□□□□ 0.89
ACTN1-209ENST00000553659 ATP6V0A2Q9Y487 856 aa20.6■□□□□ 0.89
ACTN1-209ENST00000553659 TMPOP42166 694 aaKnown RBP20.59■□□□□ 0.89
ACTN1-209ENST00000553659 EPS15P42566 896 aa20.59■□□□□ 0.89
ACTN1-209ENST00000553659 PROSER3Q2NL68 480 aa20.59■□□□□ 0.89
ACTN1-209ENST00000553659 SLC51AQ86UW1 340 aa20.59■□□□□ 0.89
ACTN1-209ENST00000553659 AIDAQ96BJ3 306 aa20.59■□□□□ 0.89
ACTN1-209ENST00000553659 WBP1LQ9NX94 342 aa20.59■□□□□ 0.89
ACTN1-209ENST00000553659 PPIP5K2O43314 1243 aa20.58■□□□□ 0.89
ACTN1-209ENST00000553659 ANXA1P04083 346 aa20.58■□□□□ 0.89
ACTN1-209ENST00000553659 CTCFP49711 727 aaPredicted RBP20.58■□□□□ 0.89
ACTN1-209ENST00000553659 LMOD3Q0VAK6 560 aa20.58■□□□□ 0.89
ACTN1-209ENST00000553659 DDX21Q9NR30 783 aaKnown RBP eCLIP20.58■□□□□ 0.89
ACTN1-209ENST00000553659 HSP90AB3PQ58FF7 597 aa20.57■□□□□ 0.88
ACTN1-209ENST00000553659 USP50Q70EL3 339 aaPredicted RBP20.57■□□□□ 0.88
ACTN1-209ENST00000553659 COPS6Q7L5N1 327 aa20.57■□□□□ 0.88
ACTN1-209ENST00000553659 ABCC4O15439 1325 aa20.56■□□□□ 0.88
ACTN1-209ENST00000553659 BBOX1O75936 387 aa20.56■□□□□ 0.88
ACTN1-209ENST00000553659 AOC3Q16853 763 aa20.56■□□□□ 0.88
ACTN1-209ENST00000553659 SUPT20HQ8NEM7 779 aa20.56■□□□□ 0.88
ACTN1-209ENST00000553659 RTFDC1Q9BY42 306 aaPredicted RBP20.56■□□□□ 0.88
ACTN1-209ENST00000553659 ABT1Q9ULW3 272 aaKnown RBP20.56■□□□□ 0.88
ACTN1-209ENST00000553659 TAF1P21675 1872 aa20.56■□□□□ 0.88
ACTN1-209ENST00000553659 ZNF521Q96K83 1311 aa20.55■□□□□ 0.88
ACTN1-209ENST00000553659 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms