RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
ATXN3-222ENST00000553570 TATP17735 454 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-222ENST00000553570 CTBSQ01459 385 aa7.41□□□□□ -1.22
ATXN3-222ENST00000553570 TNP2Q05952 138 aa7.41□□□□□ -1.22
ATXN3-222ENST00000553570 STAG2Q8N3U4 1231 aa7.41□□□□□ -1.22
ATXN3-222ENST00000553570 ADAMTS8Q9UP79 889 aa7.41□□□□□ -1.22
ATXN3-222ENST00000553570 ATAD2Q6PL18 1390 aa7.41□□□□□ -1.22
ATXN3-222ENST00000553570 PLB1Q6P1J6 1458 aa7.41□□□□□ -1.22
ATXN3-222ENST00000553570 ATXN7O15265 892 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-222ENST00000553570 GSK3AP49840 483 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-222ENST00000553570 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 C1orf53Q5VUE5 145 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 FIGNL1Q6PIW4 674 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 GAS2L2Q8NHY3 880 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-222ENST00000553570 TRAIPQ9BWF2 469 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 PHF24Q9UPV7 400 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 FHOD3Q2V2M9 1422 aa7.4□□□□□ -1.22
ATXN3-222ENST00000553570 RAPGEF6Q8TEU7 1601 aa7.39□□□□□ -1.23
ATXN3-222ENST00000553570 SAMD9Q5K651 1589 aa7.39□□□□□ -1.23
ATXN3-222ENST00000553570 EFSO43281 561 aa7.39□□□□□ -1.23
ATXN3-222ENST00000553570 LGR5O75473 907 aa7.39□□□□□ -1.23
ATXN3-222ENST00000553570 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
ATXN3-222ENST00000553570 FGFR3P22607 806 aa7.39□□□□□ -1.23
ATXN3-222ENST00000553570 TRIM26Q12899 539 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-222ENST00000553570 SCG3Q8WXD2 468 aaKnown RBP7.39□□□□□ -1.23
ATXN3-222ENST00000553570 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
ATXN3-222ENST00000553570 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
ATXN3-222ENST00000553570 GPC6Q9Y625 555 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-222ENST00000553570 ABCC2Q92887 1545 aa7.38□□□□□ -1.23
ATXN3-222ENST00000553570 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-222ENST00000553570 FAM157BP0CG42 384 aa7.38□□□□□ -1.23
ATXN3-222ENST00000553570 MAP2K3P46734 347 aa7.38□□□□□ -1.23
ATXN3-222ENST00000553570 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-222ENST00000553570 LRRC4BQ9NT99 713 aa7.38□□□□□ -1.23
ATXN3-222ENST00000553570 ZMIZ1Q9ULJ6 1067 aa7.38□□□□□ -1.23
ATXN3-222ENST00000553570 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
ATXN3-222ENST00000553570 ASXL2Q76L83 1435 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 ATG7O95352 703 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 BCRP11274 1271 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 IGFBP4P22692 258 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 WEE1P30291 646 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 ELOAQ14241 798 aaKnown RBP7.37□□□□□ -1.23
ATXN3-222ENST00000553570 FAM182BQ5T319 152 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 BICDL1Q6ZP65 573 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 HINFPQ9BQA5 517 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 OXCT2Q9BYC2 517 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-222ENST00000553570 PHACTR1Q9C0D0 580 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 STRN4Q9NRL3 753 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 NSFL1CQ9UNZ2 370 aaKnown RBP7.37□□□□□ -1.23
ATXN3-222ENST00000553570 ABCA8O94911 1581 aa7.37□□□□□ -1.23
ATXN3-222ENST00000553570 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
ATXN3-222ENST00000553570 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
ATXN3-222ENST00000553570 LRRC69Q6ZNQ3 347 aa7.36□□□□□ -1.23
ATXN3-222ENST00000553570 ALDH16A1Q8IZ83 802 aa7.36□□□□□ -1.23
ATXN3-222ENST00000553570 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
ATXN3-222ENST00000553570 EFCAB5A4FU69 1503 aa7.36□□□□□ -1.23
ATXN3-222ENST00000553570 UHRF1BP1LA0JNW5 1464 aa7.36□□□□□ -1.23
ATXN3-222ENST00000553570 CARNS1A5YM72 827 aa7.35□□□□□ -1.23
ATXN3-222ENST00000553570 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
ATXN3-222ENST00000553570 OIP5O43482 229 aa7.35□□□□□ -1.23
ATXN3-222ENST00000553570 ZNF280CQ8ND82 737 aa7.35□□□□□ -1.23
ATXN3-222ENST00000553570 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
ATXN3-222ENST00000553570 RHPN1Q8TCX5 695 aa7.35□□□□□ -1.23
ATXN3-222ENST00000553570 KLF15Q9UIH9 416 aa7.35□□□□□ -1.23
ATXN3-222ENST00000553570 DIP2BQ9P265 1576 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 MAPKBP1O60336 1514 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 BMP4P12644 408 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 CD33P20138 364 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 KCNMA1Q12791 1236 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 LAMC2Q13753 1193 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 CHMP3Q9Y3E7 222 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 LRRIQ1Q96JM4 1722 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 ABCC10Q5T3U5 1492 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 ARHGAP35Q9NRY4 1499 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 CLIP1P30622 1438 aa7.34□□□□□ -1.23
ATXN3-222ENST00000553570 KDM5BQ9UGL1 1544 aa7.33□□□□□ -1.24
ATXN3-222ENST00000553570 ATP10BO94823 1461 aa7.33□□□□□ -1.24
ATXN3-222ENST00000553570 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
ATXN3-222ENST00000553570 GRIN2CQ14957 1233 aa7.33□□□□□ -1.24
ATXN3-222ENST00000553570 HSH2DQ96JZ2 352 aa7.33□□□□□ -1.24
ATXN3-222ENST00000553570 SUSD3Q96L08 255 aa7.33□□□□□ -1.24
ATXN3-222ENST00000553570 USTQ9Y2C2 406 aa7.33□□□□□ -1.24
ATXN3-222ENST00000553570 GJA3Q9Y6H8 435 aa7.33□□□□□ -1.24
ATXN3-222ENST00000553570 TMEM88BA6NKF7 163 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 ARAFP10398 606 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 HOXB4P17483 251 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-222ENST00000553570 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 PDE4CQ08493 712 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 STK32AQ8WU08 396 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 MARK1Q9P0L2 795 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 GGA1Q9UJY5 639 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 GDF2Q9UK05 429 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-222ENST00000553570 CDK11AQ9UQ88 783 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-222ENST00000553570 BCS1LQ9Y276 419 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
ATXN3-222ENST00000553570 FOXO3O43524 673 aa7.31□□□□□ -1.24
ATXN3-222ENST00000553570 KCNQ4P56696 695 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms