RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 HOXB7P09629 217 aa19.73■□□□□ 0.75
SDR39U1-205ENST00000553546 HSP90AB3PQ58FF7 597 aa19.73■□□□□ 0.75
SDR39U1-205ENST00000553546 SUSD4Q5VX71 490 aa19.73■□□□□ 0.75
SDR39U1-205ENST00000553546 LAS1LQ9Y4W2 734 aaKnown RBP19.73■□□□□ 0.75
SDR39U1-205ENST00000553546 RNF123Q5XPI4 1314 aa19.73■□□□□ 0.75
SDR39U1-205ENST00000553546 ANKRD36CQ5JPF3 1778 aa19.72■□□□□ 0.75
SDR39U1-205ENST00000553546 PROSER3Q2NL68 480 aa19.72■□□□□ 0.75
SDR39U1-205ENST00000553546 CC2D2BQ6DHV5 1058 aa19.72■□□□□ 0.75
SDR39U1-205ENST00000553546 DDX21Q9NR30 783 aaKnown RBP eCLIP19.72■□□□□ 0.75
SDR39U1-205ENST00000553546 SLC34A2O95436 690 aa19.71■□□□□ 0.75
SDR39U1-205ENST00000553546 ANXA1P04083 346 aa19.71■□□□□ 0.75
SDR39U1-205ENST00000553546 HOXA10P31260 410 aaPredicted RBP19.71■□□□□ 0.75
SDR39U1-205ENST00000553546 CFAP44Q96MT7 982 aa19.71■□□□□ 0.75
SDR39U1-205ENST00000553546 ZEB1P37275 1124 aaPredicted RBP19.7■□□□□ 0.74
SDR39U1-205ENST00000553546 CALD1Q05682 793 aaKnown RBP19.7■□□□□ 0.74
SDR39U1-205ENST00000553546 GRIPAP1Q4V328 841 aa19.7■□□□□ 0.74
SDR39U1-205ENST00000553546 COPS6Q7L5N1 327 aa19.7■□□□□ 0.74
SDR39U1-205ENST00000553546 XAGE3Q8WTP9 111 aa19.7■□□□□ 0.74
SDR39U1-205ENST00000553546 NECTIN2Q92692 538 aa19.7■□□□□ 0.74
SDR39U1-205ENST00000553546 RBM17Q96I25 401 aaKnown RBP19.7■□□□□ 0.74
SDR39U1-205ENST00000553546 UTP14AQ9BVJ6 771 aaKnown RBP19.7■□□□□ 0.74
SDR39U1-205ENST00000553546 AIMP1Q12904 312 aaKnown RBP19.69■□□□□ 0.74
SDR39U1-205ENST00000553546 HDGFL1Q5TGJ6 251 aa19.69■□□□□ 0.74
SDR39U1-205ENST00000553546 NLRP3Q96P20 1036 aa19.69■□□□□ 0.74
SDR39U1-205ENST00000553546 CRAMP1Q96RY5 1269 aa19.69■□□□□ 0.74
SDR39U1-205ENST00000553546 PSMD1Q99460 953 aa19.69■□□□□ 0.74
SDR39U1-205ENST00000553546 POTECB2RU33 542 aa19.68■□□□□ 0.74
SDR39U1-205ENST00000553546 KRT24Q2M2I5 525 aa19.68■□□□□ 0.74
SDR39U1-205ENST00000553546 ZNF277Q9NRM2 450 aaPredicted RBP19.68■□□□□ 0.74
SDR39U1-205ENST00000553546 IQCA1LA6NCM1 817 aa19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 DDNO94850 711 aaPredicted RBP19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 IARSP41252 1262 aaKnown RBP19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 SLC10A5Q5PT55 438 aa19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 OLFM4Q6UX06 510 aa19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 CHPF2Q9P2E5 772 aa19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 DBF4Q9UBU7 674 aaPredicted RBP19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 SCN4AP35499 1836 aa19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 SNED1Q8TER0 1413 aa19.67■□□□□ 0.74
SDR39U1-205ENST00000553546 APAF1O14727 1248 aa19.66■□□□□ 0.74
SDR39U1-205ENST00000553546 TCIRG1Q13488 830 aa19.66■□□□□ 0.74
SDR39U1-205ENST00000553546 SYNE4Q8N205 404 aa19.66■□□□□ 0.74
SDR39U1-205ENST00000553546 L3MBTL3Q96JM7 780 aaPredicted RBP19.66■□□□□ 0.74
SDR39U1-205ENST00000553546 TMX4Q9H1E5 349 aaPredicted RBP19.66■□□□□ 0.74
SDR39U1-205ENST00000553546 PPEF1O14829 653 aaPredicted RBP19.65■□□□□ 0.74
SDR39U1-205ENST00000553546 GNAI1P63096 354 aa19.65■□□□□ 0.74
SDR39U1-205ENST00000553546 NLRP10Q86W26 655 aa19.65■□□□□ 0.74
SDR39U1-205ENST00000553546 MBIPQ9NS73 344 aa19.65■□□□□ 0.74
SDR39U1-205ENST00000553546 IFT57Q9NWB7 429 aa19.65■□□□□ 0.74
SDR39U1-205ENST00000553546 FOXN1O15353 648 aa19.64■□□□□ 0.73
SDR39U1-205ENST00000553546 DUSP27Q5VZP5 1158 aa19.64■□□□□ 0.73
SDR39U1-205ENST00000553546 PLBD2Q8NHP8 589 aa19.64■□□□□ 0.73
SDR39U1-205ENST00000553546 JDP2Q8WYK2 163 aa19.64■□□□□ 0.73
SDR39U1-205ENST00000553546 HYPKQ9NX55 129 aa19.64■□□□□ 0.73
SDR39U1-205ENST00000553546 MKRN1Q9UHC7 482 aaKnown RBP19.64■□□□□ 0.73
SDR39U1-205ENST00000553546 SH3TC1Q8TE82 1336 aa19.63■□□□□ 0.73
SDR39U1-205ENST00000553546 ZNF853P0CG23 659 aa19.63■□□□□ 0.73
SDR39U1-205ENST00000553546 TRMT112Q9UI30 125 aaKnown RBP19.63■□□□□ 0.73
SDR39U1-205ENST00000553546 ZNF541Q9H0D2 1346 aa19.62■□□□□ 0.73
SDR39U1-205ENST00000553546 FZD9O00144 591 aa19.62■□□□□ 0.73
SDR39U1-205ENST00000553546 CHADLQ6NUI6 762 aa19.62■□□□□ 0.73
SDR39U1-205ENST00000553546 ANKRD13DQ6ZTN6 518 aa19.62■□□□□ 0.73
SDR39U1-205ENST00000553546 C3orf67Q6ZVT6 689 aa19.62■□□□□ 0.73
SDR39U1-205ENST00000553546 CHMP4AQ9BY43 222 aa19.62■□□□□ 0.73
SDR39U1-205ENST00000553546 LAMB2P55268 1798 aa19.62■□□□□ 0.73
SDR39U1-205ENST00000553546 CREBZFQ9NS37 354 aa19.61■□□□□ 0.73
SDR39U1-205ENST00000553546 ABCC4O15439 1325 aa19.6■□□□□ 0.73
SDR39U1-205ENST00000553546 GPC2Q8N158 579 aa19.6■□□□□ 0.73
SDR39U1-205ENST00000553546 ATP6V0A2Q9Y487 856 aa19.6■□□□□ 0.73
SDR39U1-205ENST00000553546 CNTNAP1P78357 1384 aa19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 BBOX1O75936 387 aa19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 POTEIP0CG38 1075 aa19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 POTEJP0CG39 1038 aa19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 EIF6P56537 245 aaKnown RBP19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 LDHDQ86WU2 507 aa19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 LARGE2Q8N3Y3 721 aa19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 VPS33BQ9H267 617 aa19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 TAF1DQ9H5J8 278 aaPredicted RBP19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 HACL1Q9UJ83 578 aa19.59■□□□□ 0.73
SDR39U1-205ENST00000553546 TCERG1O14776 1098 aaKnown RBP19.58■□□□□ 0.72
SDR39U1-205ENST00000553546 HCLS1P14317 486 aaPredicted RBP19.58■□□□□ 0.72
SDR39U1-205ENST00000553546 DDX46Q7L014 1031 aaKnown RBP19.58■□□□□ 0.72
SDR39U1-205ENST00000553546 SUPT20HQ8NEM7 779 aa19.58■□□□□ 0.72
SDR39U1-205ENST00000553546 ISCA1Q9BUE6 129 aa19.58■□□□□ 0.72
SDR39U1-205ENST00000553546 PRDM10Q9NQV6 1147 aa19.58■□□□□ 0.72
SDR39U1-205ENST00000553546 GOLGA2Q08379 1002 aa19.57■□□□□ 0.72
SDR39U1-205ENST00000553546 TMC4Q7Z404 712 aa19.57■□□□□ 0.72
SDR39U1-205ENST00000553546 PNMA8AQ86V59 439 aaPredicted RBP19.57■□□□□ 0.72
SDR39U1-205ENST00000553546 TRIM28Q13263 835 aaKnown RBP19.56■□□□□ 0.72
SDR39U1-205ENST00000553546 GRAPQ13588 217 aa19.56■□□□□ 0.72
SDR39U1-205ENST00000553546 SP8Q8IXZ3 490 aa19.56■□□□□ 0.72
SDR39U1-205ENST00000553546 NIM1KQ8IY84 436 aa19.56■□□□□ 0.72
SDR39U1-205ENST00000553546 GRAPLQ8TC17 118 aaPredicted RBP19.56■□□□□ 0.72
SDR39U1-205ENST00000553546 DDX60Q8IY21 1712 aaKnown RBP19.56■□□□□ 0.72
SDR39U1-205ENST00000553546 PPIP5K2O43314 1243 aa19.55■□□□□ 0.72
SDR39U1-205ENST00000553546 EPHX2P34913 555 aa19.55■□□□□ 0.72
SDR39U1-205ENST00000553546 CCDC27Q2M243 656 aa19.55■□□□□ 0.72
SDR39U1-205ENST00000553546 RIC3Q7Z5B4 369 aa19.55■□□□□ 0.72
SDR39U1-205ENST00000553546 COL4A5P29400 1685 aa19.55■□□□□ 0.72
SDR39U1-205ENST00000553546 ATP5J2-PTCD1G3V325 749 aa19.54■□□□□ 0.72
SDR39U1-205ENST00000553546 HSP90B1P14625 803 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms