RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 ABCC12Q96J65 1359 aa16.33■□□□□ 0.21
SIX1-202ENST00000553535 GPTP24298 496 aa16.33■□□□□ 0.2
SIX1-202ENST00000553535 SUSD4Q5VX71 490 aa16.33■□□□□ 0.2
SIX1-202ENST00000553535 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.2
SIX1-202ENST00000553535 KCNA4P22459 653 aa16.32■□□□□ 0.2
SIX1-202ENST00000553535 ZNF277Q9NRM2 450 aaPredicted RBP16.32■□□□□ 0.2
SIX1-202ENST00000553535 MYBBP1AQ9BQG0 1328 aaKnown RBP16.32■□□□□ 0.2
SIX1-202ENST00000553535 IBTKQ9P2D0 1353 aaPredicted RBP16.32■□□□□ 0.2
SIX1-202ENST00000553535 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
SIX1-202ENST00000553535 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
SIX1-202ENST00000553535 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
SIX1-202ENST00000553535 RIC1Q4ADV7 1423 aa16.31■□□□□ 0.2
SIX1-202ENST00000553535 SYNE4Q8N205 404 aa16.3■□□□□ 0.2
SIX1-202ENST00000553535 L3MBTL3Q96JM7 780 aaPredicted RBP16.3■□□□□ 0.2
SIX1-202ENST00000553535 SNED1Q8TER0 1413 aa16.3■□□□□ 0.2
SIX1-202ENST00000553535 NTSR2O95665 410 aa16.3■□□□□ 0.2
SIX1-202ENST00000553535 PROSER3Q2NL68 480 aa16.3■□□□□ 0.2
SIX1-202ENST00000553535 CCDC146Q8IYE0 955 aa16.3■□□□□ 0.2
SIX1-202ENST00000553535 SCN4AP35499 1836 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 CHL1O00533 1208 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 ANXA1P04083 346 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 POTEIP0CG38 1075 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 POTEJP0CG39 1038 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 PARP10Q53GL7 1025 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 CHADLQ6NUI6 762 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 PSMD1Q99460 953 aa16.29■□□□□ 0.2
SIX1-202ENST00000553535 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
SIX1-202ENST00000553535 NEUROD2Q15784 382 aa16.28■□□□□ 0.2
SIX1-202ENST00000553535 PPP1R42Q7Z4L9 355 aa16.28■□□□□ 0.2
SIX1-202ENST00000553535 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
SIX1-202ENST00000553535 RUNDC1Q96C34 613 aa16.28■□□□□ 0.2
SIX1-202ENST00000553535 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
SIX1-202ENST00000553535 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
SIX1-202ENST00000553535 ZNF541Q9H0D2 1346 aa16.27■□□□□ 0.2
SIX1-202ENST00000553535 IQCA1LA6NCM1 817 aa16.27■□□□□ 0.2
SIX1-202ENST00000553535 FZD9O00144 591 aa16.27■□□□□ 0.2
SIX1-202ENST00000553535 SLC10A5Q5PT55 438 aa16.27■□□□□ 0.2
SIX1-202ENST00000553535 C3orf67Q6ZVT6 689 aa16.27■□□□□ 0.2
SIX1-202ENST00000553535 TAF1DQ9H5J8 278 aaPredicted RBP16.27■□□□□ 0.2
SIX1-202ENST00000553535 ADAMTS8Q9UP79 889 aa16.27■□□□□ 0.2
SIX1-202ENST00000553535 COPS6Q7L5N1 327 aa16.26■□□□□ 0.19
SIX1-202ENST00000553535 RBM17Q96I25 401 aaKnown RBP16.26■□□□□ 0.19
SIX1-202ENST00000553535 POLA2Q14181 598 aa16.26■□□□□ 0.19
SIX1-202ENST00000553535 KRT24Q2M2I5 525 aa16.26■□□□□ 0.19
SIX1-202ENST00000553535 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
SIX1-202ENST00000553535 NECTIN2Q92692 538 aa16.26■□□□□ 0.19
SIX1-202ENST00000553535 UTP14AQ9BVJ6 771 aaKnown RBP16.26■□□□□ 0.19
SIX1-202ENST00000553535 WDR43Q15061 677 aaKnown RBP eCLIP16.25■□□□□ 0.19
SIX1-202ENST00000553535 LDHDQ86WU2 507 aa16.25■□□□□ 0.19
SIX1-202ENST00000553535 XAGE3Q8WTP9 111 aa16.25■□□□□ 0.19
SIX1-202ENST00000553535 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
SIX1-202ENST00000553535 DDX21Q9NR30 783 aaKnown RBP eCLIP16.25■□□□□ 0.19
SIX1-202ENST00000553535 AIMP1Q12904 312 aaKnown RBP16.24■□□□□ 0.19
SIX1-202ENST00000553535 PPEF1O14829 653 aaPredicted RBP16.23■□□□□ 0.19
SIX1-202ENST00000553535 TCIRG1Q13488 830 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 SLC51AQ86UW1 340 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 NLRP10Q86W26 655 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 GPC2Q8N158 579 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 JDP2Q8WYK2 163 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 HACL1Q9UJ83 578 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
SIX1-202ENST00000553535 ANKRD36CQ5JPF3 1778 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 RNF123Q5XPI4 1314 aa16.23■□□□□ 0.19
SIX1-202ENST00000553535 COL4A5P29400 1685 aa16.22■□□□□ 0.19
SIX1-202ENST00000553535 PRKRIP1Q9H875 184 aaPredicted RBP16.22■□□□□ 0.19
SIX1-202ENST00000553535 CREBZFQ9NS37 354 aa16.22■□□□□ 0.19
SIX1-202ENST00000553535 PASKQ96RG2 1323 aa16.22■□□□□ 0.19
SIX1-202ENST00000553535 TCERG1O14776 1098 aaKnown RBP16.21■□□□□ 0.19
SIX1-202ENST00000553535 ITGBL1O95965 494 aaPredicted RBP16.21■□□□□ 0.19
SIX1-202ENST00000553535 EPHX2P34913 555 aa16.21■□□□□ 0.19
SIX1-202ENST00000553535 HOXB7P09629 217 aa16.21■□□□□ 0.18
SIX1-202ENST00000553535 CFAP44Q96MT7 982 aa16.21■□□□□ 0.18
SIX1-202ENST00000553535 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.18
SIX1-202ENST00000553535 ATP6V0A2Q9Y487 856 aa16.21■□□□□ 0.18
SIX1-202ENST00000553535 LAMB2P55268 1798 aa16.2■□□□□ 0.18
SIX1-202ENST00000553535 ADAMTSL1Q8N6G6 1762 aa16.2■□□□□ 0.18
SIX1-202ENST00000553535 EIF6P56537 245 aaKnown RBP16.2■□□□□ 0.18
SIX1-202ENST00000553535 EAPPQ56P03 285 aaPredicted RBP16.2■□□□□ 0.18
SIX1-202ENST00000553535 LARGE2Q8N3Y3 721 aa16.2■□□□□ 0.18
SIX1-202ENST00000553535 ABCC4O15439 1325 aa16.19■□□□□ 0.18
SIX1-202ENST00000553535 BBOX1O75936 387 aa16.19■□□□□ 0.18
SIX1-202ENST00000553535 HCLS1P14317 486 aaPredicted RBP16.19■□□□□ 0.18
SIX1-202ENST00000553535 COL13A1Q5TAT6 717 aaPredicted RBP16.19■□□□□ 0.18
SIX1-202ENST00000553535 HDGFL1Q5TGJ6 251 aa16.19■□□□□ 0.18
SIX1-202ENST00000553535 PNMA8AQ86V59 439 aaPredicted RBP16.19■□□□□ 0.18
SIX1-202ENST00000553535 TRMT112Q9UI30 125 aaKnown RBP16.19■□□□□ 0.18
SIX1-202ENST00000553535 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
SIX1-202ENST00000553535 ANKRD13DQ6ZTN6 518 aa16.18■□□□□ 0.18
SIX1-202ENST00000553535 PLBD2Q8NHP8 589 aa16.18■□□□□ 0.18
SIX1-202ENST00000553535 VPS33BQ9H267 617 aa16.18■□□□□ 0.18
SIX1-202ENST00000553535 DBF4Q9UBU7 674 aaPredicted RBP16.18■□□□□ 0.18
SIX1-202ENST00000553535 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
SIX1-202ENST00000553535 GJA3Q9Y6H8 435 aa16.18■□□□□ 0.18
SIX1-202ENST00000553535 ZNF853P0CG23 659 aa16.17■□□□□ 0.18
SIX1-202ENST00000553535 DUSP27Q5VZP5 1158 aa16.17■□□□□ 0.18
SIX1-202ENST00000553535 SP8Q8IXZ3 490 aa16.17■□□□□ 0.18
SIX1-202ENST00000553535 RTFDC1Q9BY42 306 aaPredicted RBP16.17■□□□□ 0.18
SIX1-202ENST00000553535 TMX4Q9H1E5 349 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms