RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 RBCK1Q9BYM8 510 aa8.22□□□□□ -1.09
SCFD1-209ENST00000553280 SAP130Q9H0E3 1048 aa8.22□□□□□ -1.09
SCFD1-209ENST00000553280 ENAMQ9NRM1 1142 aa8.22□□□□□ -1.09
SCFD1-209ENST00000553280 RNF225M0QZC1 329 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-209ENST00000553280 C2CD2LO14523 706 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 BMP4P12644 408 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 VAMP1P23763 118 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 IRS1P35568 1242 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 SH3PXD2AQ5TCZ1 1133 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 BICDL1Q6ZP65 573 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 OXCT2Q9BYC2 517 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-209ENST00000553280 NDFIP2Q9NV92 336 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 ZNF232Q9UNY5 417 aa8.21□□□□□ -1.1
SCFD1-209ENST00000553280 ATXN7O15265 892 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-209ENST00000553280 MPSTP25325 297 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 NOS2P35228 1153 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 PSMA6P60900 246 aaKnown RBP8.2□□□□□ -1.1
SCFD1-209ENST00000553280 RASSF7Q02833 373 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 COX20Q5RI15 118 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 FIGNL1Q6PIW4 674 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 POTEAQ6S8J7 498 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 NLRP8Q86W28 1048 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 CITED4Q96RK1 184 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 ZIC5Q96T25 663 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 ZDHHC3Q9NYG2 299 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 STIM2Q9P246 746 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 PCDHGC4Q9Y5F7 938 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 GJA3Q9Y6H8 435 aa8.2□□□□□ -1.1
SCFD1-209ENST00000553280 KHNYNO15037 678 aaKnown RBP8.19□□□□□ -1.1
SCFD1-209ENST00000553280 IGSF3O75054 1194 aa8.19□□□□□ -1.1
SCFD1-209ENST00000553280 TAGLNQ01995 201 aaKnown RBP8.19□□□□□ -1.1
SCFD1-209ENST00000553280 TEAD4Q15561 434 aa8.19□□□□□ -1.1
SCFD1-209ENST00000553280 EAPPQ56P03 285 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-209ENST00000553280 SCARF2Q96GP6 870 aaPredicted RBP8.19□□□□□ -1.1
SCFD1-209ENST00000553280 TNFRSF10BO14763 440 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 OIP5O43482 229 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 NDUFB5O43674 189 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 GDF11O95390 407 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 ALKBH2Q6NS38 261 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 C1orf229Q6ZS94 237 aaPredicted RBP8.18□□□□□ -1.1
SCFD1-209ENST00000553280 TMC7Q7Z402 723 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 TMEM151AQ8N4L1 468 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 MYO19Q96H55 970 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 BRPF3Q9ULD4 1205 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 CNTNAP5Q8WYK1 1306 aa8.18□□□□□ -1.1
SCFD1-209ENST00000553280 SERTM1A2A2V5 107 aa8.17□□□□□ -1.1
SCFD1-209ENST00000553280 MAPTP10636 758 aaKnown RBP8.17□□□□□ -1.1
SCFD1-209ENST00000553280 CD33P20138 364 aa8.17□□□□□ -1.1
SCFD1-209ENST00000553280 EIF1AXP47813 144 aaKnown RBP8.17□□□□□ -1.1
SCFD1-209ENST00000553280 GALNT6Q8NCL4 622 aa8.17□□□□□ -1.1
SCFD1-209ENST00000553280 QTRT2Q9H974 415 aaKnown RBP8.17□□□□□ -1.1
SCFD1-209ENST00000553280 HCN2Q9UL51 889 aa8.17□□□□□ -1.1
SCFD1-209ENST00000553280 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
SCFD1-209ENST00000553280 SHISA8B8ZZ34 492 aa8.16□□□□□ -1.1
SCFD1-209ENST00000553280 TNP2Q05952 138 aa8.16□□□□□ -1.1
SCFD1-209ENST00000553280 LRFN2Q9ULH4 789 aa8.16□□□□□ -1.1
SCFD1-209ENST00000553280 HCN4Q9Y3Q4 1203 aa8.16□□□□□ -1.1
SCFD1-209ENST00000553280 TREHO43280 583 aa8.15□□□□□ -1.1
SCFD1-209ENST00000553280 FZD6O60353 706 aa8.15□□□□□ -1.1
SCFD1-209ENST00000553280 TCF3P15923 654 aa8.15□□□□□ -1.1
SCFD1-209ENST00000553280 HIRAP54198 1017 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-209ENST00000553280 LRRC69Q6ZNQ3 347 aa8.15□□□□□ -1.1
SCFD1-209ENST00000553280 EDARADDQ8WWZ3 215 aa8.15□□□□□ -1.1
SCFD1-209ENST00000553280 BCL11AQ9H165 835 aa8.15□□□□□ -1.1
SCFD1-209ENST00000553280 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.1
SCFD1-209ENST00000553280 GGA1Q9UJY5 639 aa8.15□□□□□ -1.1
SCFD1-209ENST00000553280 GDF2Q9UK05 429 aaPredicted RBP8.15□□□□□ -1.1
SCFD1-209ENST00000553280 EML1O00423 815 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 P4HBP07237 508 aaKnown RBP8.14□□□□□ -1.11
SCFD1-209ENST00000553280 BRD2P25440 801 aaKnown RBP8.14□□□□□ -1.11
SCFD1-209ENST00000553280 PLCB3Q01970 1234 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 AAMPQ13685 434 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 DSC3Q14574 896 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 PODNQ7Z5L7 613 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 GOLGA6L1Q8N7Z2 621 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 ABTB2Q8N961 1025 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 RHPN1Q8TCX5 695 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 NEUROD4Q9HD90 331 aa8.14□□□□□ -1.11
SCFD1-209ENST00000553280 NEURL1BA8MQ27 555 aa8.13□□□□□ -1.11
SCFD1-209ENST00000553280 ZBTB39O15060 712 aa8.13□□□□□ -1.11
SCFD1-209ENST00000553280 FMR1Q06787 632 aaKnown RBP eCLIP8.13□□□□□ -1.11
SCFD1-209ENST00000553280 TMC1Q8TDI8 760 aa8.13□□□□□ -1.11
SCFD1-209ENST00000553280 DMRTB1Q96MA1 342 aa8.13□□□□□ -1.11
SCFD1-209ENST00000553280 PHACTR1Q9C0D0 580 aa8.13□□□□□ -1.11
SCFD1-209ENST00000553280 RRAGCQ9HB90 399 aa8.13□□□□□ -1.11
SCFD1-209ENST00000553280 STRN4Q9NRL3 753 aa8.13□□□□□ -1.11
SCFD1-209ENST00000553280 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
SCFD1-209ENST00000553280 IGHA2P01877 340 aa8.12□□□□□ -1.11
SCFD1-209ENST00000553280 FAM157BP0CG42 384 aa8.12□□□□□ -1.11
SCFD1-209ENST00000553280 AMPD1P23109 780 aa8.12□□□□□ -1.11
SCFD1-209ENST00000553280 SNRPNP63162 240 aaKnown RBP8.12□□□□□ -1.11
SCFD1-209ENST00000553280 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
SCFD1-209ENST00000553280 KANK3Q6NY19 840 aa8.12□□□□□ -1.11
SCFD1-209ENST00000553280 ALDH16A1Q8IZ83 802 aa8.12□□□□□ -1.11
SCFD1-209ENST00000553280 BEND7Q8N7W2 519 aaPredicted RBP8.12□□□□□ -1.11
SCFD1-209ENST00000553280 FAM129BQ96TA1 746 aa8.12□□□□□ -1.11
SCFD1-209ENST00000553280 PHF20L1A8MW92 1017 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 FGD1P98174 961 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 RTN1Q16799 776 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms