RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 FNBP4Q8N3X1 1017 aaPredicted RBP10.31□□□□□ -0.76
DEPDC4-210ENST00000551642 CDCA7Q9BWT1 371 aaPredicted RBP10.31□□□□□ -0.76
DEPDC4-210ENST00000551642 ITGA6P23229 1130 aa10.3□□□□□ -0.76
DEPDC4-210ENST00000551642 LORP23490 312 aaPredicted RBP10.3□□□□□ -0.76
DEPDC4-210ENST00000551642 DDX17Q92841 729 aaKnown RBP10.3□□□□□ -0.76
DEPDC4-210ENST00000551642 NCOA3Q9Y6Q9 1424 aa10.3□□□□□ -0.76
DEPDC4-210ENST00000551642 MYO5BQ9ULV0 1848 aa10.3□□□□□ -0.76
DEPDC4-210ENST00000551642 CHD4Q14839 1912 aa10.29□□□□□ -0.76
DEPDC4-210ENST00000551642 EFCAB6Q5THR3 1501 aa10.29□□□□□ -0.76
DEPDC4-210ENST00000551642 MEN1O00255 615 aa10.29□□□□□ -0.76
DEPDC4-210ENST00000551642 USP4Q13107 963 aa10.29□□□□□ -0.76
DEPDC4-210ENST00000551642 RNF135Q8IUD6 432 aa10.29□□□□□ -0.76
DEPDC4-210ENST00000551642 NLRP3Q96P20 1036 aa10.29□□□□□ -0.76
DEPDC4-210ENST00000551642 GRIP2Q9C0E4 1043 aa10.29□□□□□ -0.76
DEPDC4-210ENST00000551642 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.28□□□□□ -0.76
DEPDC4-210ENST00000551642 MAP7D1Q3KQU3 841 aa10.28□□□□□ -0.76
DEPDC4-210ENST00000551642 WDR44Q5JSH3 913 aa10.28□□□□□ -0.76
DEPDC4-210ENST00000551642 ZSCAN1Q8NBB4 408 aa10.28□□□□□ -0.76
DEPDC4-210ENST00000551642 LRRC59Q96AG4 307 aaKnown RBP10.28□□□□□ -0.76
DEPDC4-210ENST00000551642 SIRT1Q96EB6 747 aa10.28□□□□□ -0.76
DEPDC4-210ENST00000551642 CFDP1Q9UEE9 299 aaPredicted RBP10.28□□□□□ -0.76
DEPDC4-210ENST00000551642 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
DEPDC4-210ENST00000551642 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 SEMA3FQ13275 785 aa10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 R3HDM1Q15032 1099 aaKnown RBP10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 PRICKLE2Q7Z3G6 844 aa10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 WWC1Q8IX03 1113 aa10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 ESYT1Q9BSJ8 1104 aa10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 ARHGEF10LQ9HCE6 1279 aa10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 CCDC18Q5T9S5 1454 aa10.27□□□□□ -0.77
DEPDC4-210ENST00000551642 GPR161Q8N6U8 529 aaKnown RBP10.26□□□□□ -0.77
DEPDC4-210ENST00000551642 C19orf44Q9H6X5 657 aa10.26□□□□□ -0.77
DEPDC4-210ENST00000551642 HRH3Q9Y5N1 445 aa10.26□□□□□ -0.77
DEPDC4-210ENST00000551642 LAMC1P11047 1609 aa10.25□□□□□ -0.77
DEPDC4-210ENST00000551642 XAGE2Q96GT9 111 aa10.25□□□□□ -0.77
DEPDC4-210ENST00000551642 GMCL1Q96IK5 515 aa10.25□□□□□ -0.77
DEPDC4-210ENST00000551642 COL22A1Q8NFW1 1626 aaPredicted RBP10.25□□□□□ -0.77
DEPDC4-210ENST00000551642 MST1RQ04912 1400 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 FAM181BA6NEQ2 426 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 RAD21O60216 631 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 ATF3P18847 181 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 SLC27A3Q5K4L6 730 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 SV2AQ7L0J3 742 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 CNKSR1Q969H4 720 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 ALG2Q9H553 416 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 PTCH1Q13635 1447 aa10.24□□□□□ -0.77
DEPDC4-210ENST00000551642 EIF2AK4Q9P2K8 1649 aaKnown RBP10.23□□□□□ -0.77
DEPDC4-210ENST00000551642 IL2RAP01589 272 aa10.23□□□□□ -0.77
DEPDC4-210ENST00000551642 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
DEPDC4-210ENST00000551642 C14orf37Q86TY3 774 aa10.23□□□□□ -0.77
DEPDC4-210ENST00000551642 PLPP7Q8NBV4 271 aa10.23□□□□□ -0.77
DEPDC4-210ENST00000551642 POM121Q96HA1 1249 aa10.23□□□□□ -0.77
DEPDC4-210ENST00000551642 DYRK1BQ9Y463 629 aa10.23□□□□□ -0.77
DEPDC4-210ENST00000551642 TNS1Q9HBL0 1735 aaKnown RBP10.23□□□□□ -0.77
DEPDC4-210ENST00000551642 RGPD1P0DJD0 1748 aa10.22□□□□□ -0.77
DEPDC4-210ENST00000551642 RHOQP17081 205 aa10.22□□□□□ -0.77
DEPDC4-210ENST00000551642 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
DEPDC4-210ENST00000551642 CENPCQ03188 943 aa10.22□□□□□ -0.77
DEPDC4-210ENST00000551642 SF3B2Q13435 895 aaKnown RBP10.22□□□□□ -0.77
DEPDC4-210ENST00000551642 VWA5B2Q8N398 1253 aa10.22□□□□□ -0.77
DEPDC4-210ENST00000551642 CASKIN1Q8WXD9 1431 aa10.22□□□□□ -0.77
DEPDC4-210ENST00000551642 RALGAPBQ86X10 1494 aa10.22□□□□□ -0.77
DEPDC4-210ENST00000551642 KRT76Q01546 638 aa10.21□□□□□ -0.77
DEPDC4-210ENST00000551642 POU4F2Q12837 409 aa10.21□□□□□ -0.77
DEPDC4-210ENST00000551642 NBPF10Q6P3W6 841 aaKnown RBP10.21□□□□□ -0.77
DEPDC4-210ENST00000551642 NBPF15Q8N660 670 aa10.21□□□□□ -0.77
DEPDC4-210ENST00000551642 RAB6BQ9NRW1 208 aa10.21□□□□□ -0.77
DEPDC4-210ENST00000551642 CCNB3Q8WWL7 1395 aa10.21□□□□□ -0.78
DEPDC4-210ENST00000551642 ARHGAP31Q2M1Z3 1444 aa10.21□□□□□ -0.78
DEPDC4-210ENST00000551642 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.78
DEPDC4-210ENST00000551642 ADGRB3O60242 1522 aa10.2□□□□□ -0.78
DEPDC4-210ENST00000551642 LZTS3O60299 673 aaPredicted RBP10.2□□□□□ -0.78
DEPDC4-210ENST00000551642 IDI1Q13907 227 aa10.2□□□□□ -0.78
DEPDC4-210ENST00000551642 OXLD1Q5BKU9 147 aa10.2□□□□□ -0.78
DEPDC4-210ENST00000551642 NFATC2IPQ8NCF5 419 aa10.2□□□□□ -0.78
DEPDC4-210ENST00000551642 COL25A1Q9BXS0 654 aaPredicted RBP10.2□□□□□ -0.78
DEPDC4-210ENST00000551642 FHDC1Q9C0D6 1143 aaPredicted RBP10.2□□□□□ -0.78
DEPDC4-210ENST00000551642 ZFYVE9O95405 1425 aa10.19□□□□□ -0.78
DEPDC4-210ENST00000551642 CDC14CA4D256 554 aa10.19□□□□□ -0.78
DEPDC4-210ENST00000551642 WASLO00401 505 aaPredicted RBP10.19□□□□□ -0.78
DEPDC4-210ENST00000551642 TAS1R3Q7RTX0 852 aa10.19□□□□□ -0.78
DEPDC4-210ENST00000551642 TRIM22Q8IYM9 498 aa10.19□□□□□ -0.78
DEPDC4-210ENST00000551642 DCCP43146 1447 aa10.18□□□□□ -0.78
DEPDC4-210ENST00000551642 LOC105371045A0A1W2PR82 267 aa10.18□□□□□ -0.78
DEPDC4-210ENST00000551642 ZSCAN10Q96SZ4 725 aaPredicted RBP10.18□□□□□ -0.78
DEPDC4-210ENST00000551642 ETNK1Q9HBU6 452 aa10.18□□□□□ -0.78
DEPDC4-210ENST00000551642 CUEDC1Q9NWM3 386 aaPredicted RBP10.18□□□□□ -0.78
DEPDC4-210ENST00000551642 MYOM2P54296 1465 aa10.17□□□□□ -0.78
DEPDC4-210ENST00000551642 ADAMTS13Q76LX8 1427 aa10.17□□□□□ -0.78
DEPDC4-210ENST00000551642 PLEKHG1Q9ULL1 1385 aa10.17□□□□□ -0.78
DEPDC4-210ENST00000551642 H7C1W4 665 aa10.17□□□□□ -0.78
DEPDC4-210ENST00000551642 BAG6P46379 1132 aa10.17□□□□□ -0.78
DEPDC4-210ENST00000551642 CNTNAP3BQ96NU0 1288 aa10.17□□□□□ -0.78
DEPDC4-210ENST00000551642 CNTNAP3Q9BZ76 1288 aa10.17□□□□□ -0.78
DEPDC4-210ENST00000551642 TRPM2O94759 1503 aa10.17□□□□□ -0.78
DEPDC4-210ENST00000551642 PTPRUQ92729 1446 aa10.16□□□□□ -0.78
DEPDC4-210ENST00000551642 NALCNQ8IZF0 1738 aa10.16□□□□□ -0.78
DEPDC4-210ENST00000551642 NUP188Q5SRE5 1749 aa10.16□□□□□ -0.78
DEPDC4-210ENST00000551642 GCC2Q8IWJ2 1684 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms