RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 SYT10Q6XYQ8 523 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 MRFAP1L1Q96HT8 127 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 TSGA10Q9BZW7 698 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 ANAPC4Q9UJX5 808 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 SMIM24O75264 130 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 CCT4P50991 539 aaKnown RBP10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 NBPF9Q3BBW0 867 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 ANO6Q4KMQ2 910 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 SPECC1Q5M775 1068 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 BLOC1S2Q6QNY1 142 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 N4BP2L2Q92802 583 aaPredicted RBP10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 GNL3LQ9NVN8 582 aaKnown RBP10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 ZFXP17010 805 aaPredicted RBP10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 TYRO3Q06418 890 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 SPAG1Q07617 926 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 CAMK4Q16566 473 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 RUFY4Q6ZNE9 571 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 HOOK3Q86VS8 718 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 RRP7AQ9Y3A4 280 aaKnown RBP10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 CYLC1P35663 651 aaPredicted RBP10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 G3BP1Q13283 466 aaKnown RBP eCLIP10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 FKBP15Q5T1M5 1219 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 TADA2BQ86TJ2 420 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 STMN2Q93045 179 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 BCAR3O75815 825 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 FAN1Q9Y2M0 1017 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 DAAM1Q9Y4D1 1078 aa10.04□□□□□ -0.8
PPFIA2-220ENST00000550584 SMARCA4P51532 1647 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 ALDH3A1P30838 453 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 RIPK4P57078 832 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 CHMP4BP1P59074 171 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 MUM1L1Q5H9M0 696 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 USP48Q86UV5 1035 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 CCDC110Q8TBZ0 833 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 RABEP2Q9H5N1 569 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 ITGB1BP2Q9UKP3 347 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 HFM1A2PYH4 1435 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 PPFIA2O75334 1257 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 RASSF2P50749 326 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 HNRNPMP52272 730 aaKnown RBP eCLIP10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 TCP11Q8WWU5 503 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 SLC3A2P08195 630 aaKnown RBP10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 BRPF1P55201 1214 aaPredicted RBP10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 RWDD2BP57060 319 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 RAD51AP2Q09MP3 1159 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 FCHSD1Q86WN1 690 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 SMARCC2Q8TAQ2 1214 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 TTF2Q9UNY4 1162 aaKnown RBP10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 CCDC160A6NGH7 325 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 CIB2O75838 187 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 SYT1P21579 422 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 RASAL2Q9UJF2 1139 aa10.03□□□□□ -0.8
PPFIA2-220ENST00000550584 MYOM3Q5VTT5 1437 aa10.02□□□□□ -0.8
PPFIA2-220ENST00000550584 ZNF75DP51815 510 aa10.02□□□□□ -0.8
PPFIA2-220ENST00000550584 CAMSAP2Q08AD1 1489 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 DIAPH1O60610 1272 aaKnown RBP10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 FLOT1O75955 427 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 VPS36Q86VN1 386 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 GNAI2P04899 355 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 SESN3P58005 492 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 CETN2P41208 172 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 NFXL1Q6ZNB6 911 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 NEK11Q8NG66 645 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 LRRC45Q96CN5 670 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 TSC22D3Q99576 134 aa10.02□□□□□ -0.81
PPFIA2-220ENST00000550584 CASQ2O14958 399 aaPredicted RBP10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 MIER3Q7Z3K6 550 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 RASEFQ8IZ41 740 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 NOB1Q9ULX3 412 aaKnown RBP10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 PSDA5PKW4 1024 aaPredicted RBP10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 UBASH3AP57075 661 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 SEPT2Q15019 361 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 FOXD1Q16676 465 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 TEX11Q8IYF3 940 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 PAF1Q8N7H5 531 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 RABGGTAQ92696 567 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 HIP1RO75146 1068 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 MTMR3Q13615 1198 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 TRIM14Q14142 442 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 RAB11FIP4Q86YS3 637 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 SMC6Q96SB8 1091 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 PRDM4Q9UKN5 801 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 RIPOR2Q9Y4F9 1068 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 HLTFQ14527 1009 aaKnown RBP eCLIP10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 SART3Q15020 963 aaKnown RBP10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 PHLDB3Q6NSJ2 640 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 CCDC77Q9BR77 488 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 SELENOOQ9BVL4 669 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 PLCB1Q9NQ66 1216 aa10.01□□□□□ -0.81
PPFIA2-220ENST00000550584 CETN3O15182 167 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 KRT86O43790 486 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 IQCA1Q86XH1 822 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 IRAK4Q9NWZ3 460 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 CHCHD3Q9NX63 227 aaKnown RBP10□□□□□ -0.81
PPFIA2-220ENST00000550584 FYCO1Q9BQS8 1478 aa10□□□□□ -0.81
PPFIA2-220ENST00000550584 TTC41PQ6P2S7 1318 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms