RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 SPINT1O43278 529 aa8.87□□□□□ -0.99
HCFC2-204ENST00000550335 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.87□□□□□ -0.99
HCFC2-204ENST00000550335 USPL1Q5W0Q7 1092 aa8.87□□□□□ -0.99
HCFC2-204ENST00000550335 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
HCFC2-204ENST00000550335 TOR4AQ9NXH8 423 aa8.87□□□□□ -0.99
HCFC2-204ENST00000550335 ZDHHC3Q9NYG2 299 aa8.87□□□□□ -0.99
HCFC2-204ENST00000550335 PLA2G2EQ9NZK7 142 aa8.87□□□□□ -0.99
HCFC2-204ENST00000550335 FNDC3AQ9Y2H6 1198 aaKnown RBP8.87□□□□□ -0.99
HCFC2-204ENST00000550335 V9GY48 417 aaPredicted RBP8.87□□□□□ -0.99
HCFC2-204ENST00000550335 EIF4BP23588 611 aaKnown RBP8.86□□□□□ -0.99
HCFC2-204ENST00000550335 ARSDP51689 593 aa8.86□□□□□ -0.99
HCFC2-204ENST00000550335 NBPF10Q6P3W6 841 aaKnown RBP8.86□□□□□ -0.99
HCFC2-204ENST00000550335 FBF1Q8TES7 1133 aa8.86□□□□□ -0.99
HCFC2-204ENST00000550335 CCSER2Q9H7U1 834 aa8.86□□□□□ -0.99
HCFC2-204ENST00000550335 CAPN10Q9HC96 672 aa8.86□□□□□ -0.99
HCFC2-204ENST00000550335 NLRP2Q9NX02 1062 aa8.86□□□□□ -0.99
HCFC2-204ENST00000550335 RTCBQ9Y3I0 505 aaKnown RBP8.86□□□□□ -0.99
HCFC2-204ENST00000550335 AK5Q9Y6K8 562 aa8.86□□□□□ -0.99
HCFC2-204ENST00000550335 FIGNL2A6NMB9 653 aa8.85□□□□□ -0.99
HCFC2-204ENST00000550335 FANCCQ00597 558 aa8.85□□□□□ -0.99
HCFC2-204ENST00000550335 IFFO2Q5TF58 517 aa8.85□□□□□ -0.99
HCFC2-204ENST00000550335 PI16Q6UXB8 463 aa8.85□□□□□ -0.99
HCFC2-204ENST00000550335 LYSMD3Q7Z3D4 306 aa8.85□□□□□ -0.99
HCFC2-204ENST00000550335 EPS8L3Q8TE67 593 aaKnown RBP8.85□□□□□ -0.99
HCFC2-204ENST00000550335 C7orf43Q8WVR3 580 aa8.85□□□□□ -0.99
HCFC2-204ENST00000550335 DNAJC25Q9H1X3 360 aa8.85□□□□□ -0.99
HCFC2-204ENST00000550335 TIMMDC1Q9NPL8 285 aa8.85□□□□□ -0.99
HCFC2-204ENST00000550335 A0A0G2JS52 829 aa8.84□□□□□ -0.99
HCFC2-204ENST00000550335 SPATA31C2B4DYI2 1134 aa8.84□□□□□ -0.99
HCFC2-204ENST00000550335 TNFRSF21O75509 655 aa8.84□□□□□ -0.99
HCFC2-204ENST00000550335 POLR3DP05423 398 aaPredicted RBP8.84□□□□□ -0.99
HCFC2-204ENST00000550335 IRS1P35568 1242 aa8.84□□□□□ -0.99
HCFC2-204ENST00000550335 SF3A1Q15459 793 aaKnown RBP8.84□□□□□ -0.99
HCFC2-204ENST00000550335 BTLAQ7Z6A9 289 aa8.84□□□□□ -0.99
HCFC2-204ENST00000550335 METTL16Q86W50 562 aaKnown RBP8.84□□□□□ -0.99
HCFC2-204ENST00000550335 CCDC74AQ96AQ1 378 aa8.84□□□□□ -0.99
HCFC2-204ENST00000550335 CEP63Q96MT8 703 aa8.84□□□□□ -0.99
HCFC2-204ENST00000550335 ZIC5Q96T25 663 aa8.84□□□□□ -0.99
HCFC2-204ENST00000550335 PHACTR2O75167 634 aa8.83□□□□□ -1
HCFC2-204ENST00000550335 MSX1P28360 303 aa8.83□□□□□ -1
HCFC2-204ENST00000550335 RAD51AP2Q09MP3 1159 aa8.83□□□□□ -1
HCFC2-204ENST00000550335 FRMD6Q96NE9 622 aa8.83□□□□□ -1
HCFC2-204ENST00000550335 ELP3Q9H9T3 547 aa8.83□□□□□ -1
HCFC2-204ENST00000550335 GPAMQ9HCL2 828 aa8.83□□□□□ -1
HCFC2-204ENST00000550335 METTL5Q9NRN9 209 aaKnown RBP8.83□□□□□ -1
HCFC2-204ENST00000550335 DMGDHQ9UI17 866 aaKnown RBP8.83□□□□□ -1
HCFC2-204ENST00000550335 A0A1W2PNR3 127 aa8.82□□□□□ -1
HCFC2-204ENST00000550335 INPP5BP32019 993 aa8.82□□□□□ -1
HCFC2-204ENST00000550335 RNF217Q8TC41 542 aa8.82□□□□□ -1
HCFC2-204ENST00000550335 ACBD3Q9H3P7 528 aa8.82□□□□□ -1
HCFC2-204ENST00000550335 ZFYVE28Q9HCC9 887 aa8.82□□□□□ -1
HCFC2-204ENST00000550335 GADD45BO75293 160 aaPredicted RBP8.81□□□□□ -1
HCFC2-204ENST00000550335 CTSHP09668 335 aa8.81□□□□□ -1
HCFC2-204ENST00000550335 MMRN1Q13201 1228 aa8.81□□□□□ -1
HCFC2-204ENST00000550335 TRIP4Q15650 581 aaPredicted RBP8.81□□□□□ -1
HCFC2-204ENST00000550335 IER5Q5VY09 327 aa8.81□□□□□ -1
HCFC2-204ENST00000550335 SNX29Q8TEQ0 813 aa8.81□□□□□ -1
HCFC2-204ENST00000550335 TANGO6Q9C0B7 1094 aa8.81□□□□□ -1
HCFC2-204ENST00000550335 TGIF2Q9GZN2 237 aa8.81□□□□□ -1
HCFC2-204ENST00000550335 TMEM63CQ9P1W3 806 aa8.81□□□□□ -1
HCFC2-204ENST00000550335 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.81□□□□□ -1
HCFC2-204ENST00000550335 EPB42P16452 691 aa8.8□□□□□ -1
HCFC2-204ENST00000550335 ATP4AP20648 1035 aa8.8□□□□□ -1
HCFC2-204ENST00000550335 CRELD1Q96HD1 420 aa8.8□□□□□ -1
HCFC2-204ENST00000550335 GAS2L1Q99501 681 aaPredicted RBP8.8□□□□□ -1
HCFC2-204ENST00000550335 RUBCNLQ9H714 662 aa8.8□□□□□ -1
HCFC2-204ENST00000550335 GPC6Q9Y625 555 aaPredicted RBP8.8□□□□□ -1
HCFC2-204ENST00000550335 KCNMB2Q9Y691 235 aa8.8□□□□□ -1
HCFC2-204ENST00000550335 A0A1B0GTH6 734 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 TTLL8A6PVC2 850 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 XYLBO75191 536 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 TNNI2P48788 182 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 SCARF1Q14162 830 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 ZNF394Q53GI3 561 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 MRPL14Q6P1L8 145 aaKnown RBP8.79□□□□□ -1
HCFC2-204ENST00000550335 PGBD3Q8N328 593 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 OSBPL7Q9BZF2 842 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 C12orf49Q9H741 205 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 NPHS2Q9NP85 383 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 PCDHGB7Q9Y5F8 929 aa8.79□□□□□ -1
HCFC2-204ENST00000550335 GNL2Q13823 731 aaKnown RBP8.78□□□□□ -1
HCFC2-204ENST00000550335 TTC39BQ5VTQ0 682 aaPredicted RBP8.78□□□□□ -1
HCFC2-204ENST00000550335 PDE12Q6L8Q7 609 aaKnown RBP8.78□□□□□ -1
HCFC2-204ENST00000550335 NXPE4Q6UWF7 544 aa8.78□□□□□ -1
HCFC2-204ENST00000550335 XKR5Q6UX68 686 aa8.78□□□□□ -1
HCFC2-204ENST00000550335 TRIM67Q6ZTA4 783 aa8.78□□□□□ -1
HCFC2-204ENST00000550335 C1orf127Q8N9H9 656 aa8.78□□□□□ -1
HCFC2-204ENST00000550335 UBXN4Q92575 508 aa8.78□□□□□ -1
HCFC2-204ENST00000550335 GGT7Q9UJ14 662 aa8.78□□□□□ -1
HCFC2-204ENST00000550335 EREGO14944 169 aa8.77□□□□□ -1.01
HCFC2-204ENST00000550335 DNAJA1P31689 397 aaKnown RBP8.77□□□□□ -1.01
HCFC2-204ENST00000550335 KRT25Q7Z3Z0 450 aa8.77□□□□□ -1.01
HCFC2-204ENST00000550335 USP48Q86UV5 1035 aa8.77□□□□□ -1.01
HCFC2-204ENST00000550335 INPP5FQ9Y2H2 1132 aa8.77□□□□□ -1.01
HCFC2-204ENST00000550335 USP17L7P0C7H9 530 aa8.76□□□□□ -1.01
HCFC2-204ENST00000550335 BMP1P13497 986 aa8.76□□□□□ -1.01
HCFC2-204ENST00000550335 MEI1Q5TIA1 1274 aa8.76□□□□□ -1.01
HCFC2-204ENST00000550335 HS2ST1Q7LGA3 356 aa8.76□□□□□ -1.01
HCFC2-204ENST00000550335 BRD7Q9NPI1 651 aa8.76□□□□□ -1.01
HCFC2-204ENST00000550335 CNTN3Q9P232 1028 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms