RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 AIMP1Q12904 312 aaKnown RBP17.5■□□□□ 0.39
NUP188-211ENST00000550219 CRY2Q49AN0 593 aa17.5■□□□□ 0.39
NUP188-211ENST00000550219 IFFO2Q5TF58 517 aa17.5■□□□□ 0.39
NUP188-211ENST00000550219 RTKN2Q8IZC4 609 aa17.5■□□□□ 0.39
NUP188-211ENST00000550219 ANKRD36CQ5JPF3 1778 aa17.49■□□□□ 0.39
NUP188-211ENST00000550219 TCERG1O14776 1098 aaKnown RBP17.49■□□□□ 0.39
NUP188-211ENST00000550219 IARSP41252 1262 aaKnown RBP17.49■□□□□ 0.39
NUP188-211ENST00000550219 PDIA6Q15084 440 aa17.49■□□□□ 0.39
NUP188-211ENST00000550219 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
NUP188-211ENST00000550219 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
NUP188-211ENST00000550219 ZNF34Q8IZ26 560 aa17.49■□□□□ 0.39
NUP188-211ENST00000550219 SYNE4Q8N205 404 aa17.49■□□□□ 0.39
NUP188-211ENST00000550219 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
NUP188-211ENST00000550219 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
NUP188-211ENST00000550219 SLC51AQ86UW1 340 aa17.48■□□□□ 0.39
NUP188-211ENST00000550219 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
NUP188-211ENST00000550219 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
NUP188-211ENST00000550219 IQCA1LA6NCM1 817 aa17.47■□□□□ 0.39
NUP188-211ENST00000550219 PPEF1O14829 653 aaPredicted RBP17.47■□□□□ 0.39
NUP188-211ENST00000550219 PARP10Q53GL7 1025 aa17.47■□□□□ 0.39
NUP188-211ENST00000550219 CHADLQ6NUI6 762 aa17.47■□□□□ 0.39
NUP188-211ENST00000550219 C3orf67Q6ZVT6 689 aa17.47■□□□□ 0.39
NUP188-211ENST00000550219 XAGE3Q8WTP9 111 aa17.47■□□□□ 0.39
NUP188-211ENST00000550219 RBM17Q96I25 401 aaKnown RBP17.47■□□□□ 0.39
NUP188-211ENST00000550219 EAPPQ56P03 285 aaPredicted RBP17.46■□□□□ 0.39
NUP188-211ENST00000550219 COPS6Q7L5N1 327 aa17.46■□□□□ 0.39
NUP188-211ENST00000550219 UTP14AQ9BVJ6 771 aaKnown RBP17.46■□□□□ 0.39
NUP188-211ENST00000550219 TRIM35Q9UPQ4 493 aa17.46■□□□□ 0.39
NUP188-211ENST00000550219 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.38
NUP188-211ENST00000550219 SCN4AP35499 1836 aa17.45■□□□□ 0.38
NUP188-211ENST00000550219 JMYQ8N9B5 988 aa17.45■□□□□ 0.38
NUP188-211ENST00000550219 ZNF428Q96B54 188 aa17.45■□□□□ 0.38
NUP188-211ENST00000550219 L3MBTL3Q96JM7 780 aaPredicted RBP17.45■□□□□ 0.38
NUP188-211ENST00000550219 TAF1DQ9H5J8 278 aaPredicted RBP17.45■□□□□ 0.38
NUP188-211ENST00000550219 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
NUP188-211ENST00000550219 COL4A5P29400 1685 aa17.45■□□□□ 0.38
NUP188-211ENST00000550219 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
NUP188-211ENST00000550219 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
NUP188-211ENST00000550219 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
NUP188-211ENST00000550219 NLRP3Q96P20 1036 aa17.44■□□□□ 0.38
NUP188-211ENST00000550219 PSMD1Q99460 953 aa17.44■□□□□ 0.38
NUP188-211ENST00000550219 CHPF2Q9P2E5 772 aa17.44■□□□□ 0.38
NUP188-211ENST00000550219 CHL1O00533 1208 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 HSP90AB3PQ58FF7 597 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 HDGFL1Q5TGJ6 251 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 CRAMP1Q96RY5 1269 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 DDX21Q9NR30 783 aaKnown RBP eCLIP17.43■□□□□ 0.38
NUP188-211ENST00000550219 HACL1Q9UJ83 578 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 CLEC11AQ9Y240 323 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 LAMB2P55268 1798 aa17.43■□□□□ 0.38
NUP188-211ENST00000550219 FZD9O00144 591 aa17.42■□□□□ 0.38
NUP188-211ENST00000550219 EPHX2P34913 555 aa17.42■□□□□ 0.38
NUP188-211ENST00000550219 NLRP10Q86W26 655 aa17.42■□□□□ 0.38
NUP188-211ENST00000550219 LARGE2Q8N3Y3 721 aa17.42■□□□□ 0.38
NUP188-211ENST00000550219 TMX4Q9H1E5 349 aaPredicted RBP17.42■□□□□ 0.38
NUP188-211ENST00000550219 ABCC4O15439 1325 aa17.42■□□□□ 0.38
NUP188-211ENST00000550219 HCLS1P14317 486 aaPredicted RBP17.41■□□□□ 0.38
NUP188-211ENST00000550219 EIF6P56537 245 aaKnown RBP17.41■□□□□ 0.38
NUP188-211ENST00000550219 MKRN1Q9UHC7 482 aaKnown RBP17.41■□□□□ 0.38
NUP188-211ENST00000550219 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
NUP188-211ENST00000550219 PPIP5K2O43314 1243 aa17.4■□□□□ 0.38
NUP188-211ENST00000550219 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
NUP188-211ENST00000550219 ADAMTSL1Q8N6G6 1762 aa17.39■□□□□ 0.37
NUP188-211ENST00000550219 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
NUP188-211ENST00000550219 NIM1KQ8IY84 436 aa17.39■□□□□ 0.37
NUP188-211ENST00000550219 GPC2Q8N158 579 aa17.39■□□□□ 0.37
NUP188-211ENST00000550219 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
NUP188-211ENST00000550219 SH3TC1Q8TE82 1336 aa17.39■□□□□ 0.37
NUP188-211ENST00000550219 HSPA1AP0DMV8 641 aaKnown RBP17.38■□□□□ 0.37
NUP188-211ENST00000550219 HSPA1BP0DMV9 641 aaKnown RBP17.38■□□□□ 0.37
NUP188-211ENST00000550219 LMOD1P29536 600 aaPredicted RBP17.38■□□□□ 0.37
NUP188-211ENST00000550219 AOC3Q16853 763 aa17.38■□□□□ 0.37
NUP188-211ENST00000550219 GRIPAP1Q4V328 841 aa17.38■□□□□ 0.37
NUP188-211ENST00000550219 SLC10A5Q5PT55 438 aa17.38■□□□□ 0.37
NUP188-211ENST00000550219 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
NUP188-211ENST00000550219 ATP6V0A2Q9Y487 856 aa17.38■□□□□ 0.37
NUP188-211ENST00000550219 LTBP1Q14766 1721 aa17.38■□□□□ 0.37
NUP188-211ENST00000550219 APAF1O14727 1248 aa17.37■□□□□ 0.37
NUP188-211ENST00000550219 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
NUP188-211ENST00000550219 DDX46Q7L014 1031 aaKnown RBP17.37■□□□□ 0.37
NUP188-211ENST00000550219 CFAP44Q96MT7 982 aa17.37■□□□□ 0.37
NUP188-211ENST00000550219 DBF4Q9UBU7 674 aaPredicted RBP17.37■□□□□ 0.37
NUP188-211ENST00000550219 DDX60Q8IY21 1712 aaKnown RBP17.37■□□□□ 0.37
NUP188-211ENST00000550219 PASKQ96RG2 1323 aa17.37■□□□□ 0.37
NUP188-211ENST00000550219 ATP5J2-PTCD1G3V325 749 aa17.36■□□□□ 0.37
NUP188-211ENST00000550219 HOXB7P09629 217 aa17.36■□□□□ 0.37
NUP188-211ENST00000550219 MAP1SQ66K74 1059 aaPredicted RBP17.36■□□□□ 0.37
NUP188-211ENST00000550219 PNMA8AQ86V59 439 aaPredicted RBP17.36■□□□□ 0.37
NUP188-211ENST00000550219 PLBD2Q8NHP8 589 aa17.36■□□□□ 0.37
NUP188-211ENST00000550219 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
NUP188-211ENST00000550219 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
NUP188-211ENST00000550219 DPP8Q6V1X1 898 aaPredicted RBP17.35■□□□□ 0.37
NUP188-211ENST00000550219 ANKRD13DQ6ZTN6 518 aa17.35■□□□□ 0.37
NUP188-211ENST00000550219 ELL2O00472 640 aaPredicted RBP17.34■□□□□ 0.37
NUP188-211ENST00000550219 SCNN1DP51172 638 aa17.34■□□□□ 0.37
NUP188-211ENST00000550219 CNTNAP1P78357 1384 aa17.34■□□□□ 0.37
NUP188-211ENST00000550219 GRAPQ13588 217 aa17.34■□□□□ 0.37
NUP188-211ENST00000550219 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms