RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 IBTKQ9P2D0 1353 aaPredicted RBP20.35■□□□□ 0.85
RAB5C-205ENST00000550013 MAPK8IP3Q9UPT6 1336 aa20.35■□□□□ 0.85
RAB5C-205ENST00000550013 ITGBL1O95965 494 aaPredicted RBP20.35■□□□□ 0.85
RAB5C-205ENST00000550013 EPHX2P34913 555 aa20.35■□□□□ 0.85
RAB5C-205ENST00000550013 RPGRQ92834 1020 aaKnown RBP20.35■□□□□ 0.85
RAB5C-205ENST00000550013 CLEC11AQ9Y240 323 aa20.35■□□□□ 0.85
RAB5C-205ENST00000550013 HOXA10P31260 410 aaPredicted RBP20.34■□□□□ 0.85
RAB5C-205ENST00000550013 C3orf67Q6ZVT6 689 aa20.34■□□□□ 0.85
RAB5C-205ENST00000550013 ZNF34Q8IZ26 560 aa20.34■□□□□ 0.85
RAB5C-205ENST00000550013 NTSR2O95665 410 aa20.33■□□□□ 0.85
RAB5C-205ENST00000550013 GPC2Q8N158 579 aa20.33■□□□□ 0.85
RAB5C-205ENST00000550013 TMEM88BA6NKF7 163 aa20.32■□□□□ 0.84
RAB5C-205ENST00000550013 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
RAB5C-205ENST00000550013 MAP1SQ66K74 1059 aaPredicted RBP20.32■□□□□ 0.84
RAB5C-205ENST00000550013 CC2D2BQ6DHV5 1058 aa20.32■□□□□ 0.84
RAB5C-205ENST00000550013 GIGYF2Q6Y7W6 1299 aaKnown RBP20.32■□□□□ 0.84
RAB5C-205ENST00000550013 JDP2Q8WYK2 163 aa20.32■□□□□ 0.84
RAB5C-205ENST00000550013 TSPYL4Q9UJ04 414 aa20.32■□□□□ 0.84
RAB5C-205ENST00000550013 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
RAB5C-205ENST00000550013 ERBB4Q15303 1308 aa20.31■□□□□ 0.84
RAB5C-205ENST00000550013 LRP10Q7Z4F1 713 aa20.31■□□□□ 0.84
RAB5C-205ENST00000550013 PNNQ9H307 717 aaKnown RBP20.31■□□□□ 0.84
RAB5C-205ENST00000550013 GJA3Q9Y6H8 435 aa20.31■□□□□ 0.84
RAB5C-205ENST00000550013 PPEF1O14829 653 aaPredicted RBP20.3■□□□□ 0.84
RAB5C-205ENST00000550013 ANXA1P04083 346 aa20.3■□□□□ 0.84
RAB5C-205ENST00000550013 EIF2S2P20042 333 aaKnown RBP20.3■□□□□ 0.84
RAB5C-205ENST00000550013 VEGFBP49765 207 aa20.3■□□□□ 0.84
RAB5C-205ENST00000550013 PDIA6Q15084 440 aa20.3■□□□□ 0.84
RAB5C-205ENST00000550013 PROSER3Q2NL68 480 aa20.3■□□□□ 0.84
RAB5C-205ENST00000550013 PNMA8AQ86V59 439 aaPredicted RBP20.3■□□□□ 0.84
RAB5C-205ENST00000550013 RBM17Q96I25 401 aaKnown RBP20.3■□□□□ 0.84
RAB5C-205ENST00000550013 CRAMP1Q96RY5 1269 aa20.3■□□□□ 0.84
RAB5C-205ENST00000550013 FOXN1O15353 648 aa20.29■□□□□ 0.84
RAB5C-205ENST00000550013 EIF6P56537 245 aaKnown RBP20.29■□□□□ 0.84
RAB5C-205ENST00000550013 CNTROBQ8N137 903 aa20.29■□□□□ 0.84
RAB5C-205ENST00000550013 LARGE2Q8N3Y3 721 aa20.29■□□□□ 0.84
RAB5C-205ENST00000550013 RIPK4P57078 832 aa20.28■□□□□ 0.84
RAB5C-205ENST00000550013 PPP1R42Q7Z4L9 355 aa20.28■□□□□ 0.84
RAB5C-205ENST00000550013 LAMB2P55268 1798 aa20.28■□□□□ 0.84
RAB5C-205ENST00000550013 ANKRD36CQ5JPF3 1778 aa20.28■□□□□ 0.84
RAB5C-205ENST00000550013 PARP10Q53GL7 1025 aa20.27■□□□□ 0.84
RAB5C-205ENST00000550013 EPS15P42566 896 aa20.26■□□□□ 0.83
RAB5C-205ENST00000550013 SCNN1DP51172 638 aa20.26■□□□□ 0.83
RAB5C-205ENST00000550013 GRIPAP1Q4V328 841 aa20.26■□□□□ 0.83
RAB5C-205ENST00000550013 NLRP3Q96P20 1036 aa20.26■□□□□ 0.83
RAB5C-205ENST00000550013 UTP14AQ9BVJ6 771 aaKnown RBP20.26■□□□□ 0.83
RAB5C-205ENST00000550013 LMOD1P29536 600 aaPredicted RBP20.25■□□□□ 0.83
RAB5C-205ENST00000550013 NECTIN2Q92692 538 aa20.25■□□□□ 0.83
RAB5C-205ENST00000550013 ABCC4O15439 1325 aa20.25■□□□□ 0.83
RAB5C-205ENST00000550013 TMPOP42166 694 aaKnown RBP20.24■□□□□ 0.83
RAB5C-205ENST00000550013 SLC10A5Q5PT55 438 aa20.24■□□□□ 0.83
RAB5C-205ENST00000550013 NIM1KQ8IY84 436 aa20.24■□□□□ 0.83
RAB5C-205ENST00000550013 RASSF10A6NK89 507 aa20.23■□□□□ 0.83
RAB5C-205ENST00000550013 PPIP5K2O43314 1243 aa20.23■□□□□ 0.83
RAB5C-205ENST00000550013 TAF1P21675 1872 aa20.23■□□□□ 0.83
RAB5C-205ENST00000550013 FMR1Q06787 632 aaKnown RBP eCLIP20.23■□□□□ 0.83
RAB5C-205ENST00000550013 AOC3Q16853 763 aa20.23■□□□□ 0.83
RAB5C-205ENST00000550013 ATP6V0A2Q9Y487 856 aa20.23■□□□□ 0.83
RAB5C-205ENST00000550013 AIMP1Q12904 312 aaKnown RBP20.22■□□□□ 0.83
RAB5C-205ENST00000550013 KRT24Q2M2I5 525 aa20.22■□□□□ 0.83
RAB5C-205ENST00000550013 DEFB115Q30KQ5 88 aa20.22■□□□□ 0.83
RAB5C-205ENST00000550013 COPS6Q7L5N1 327 aa20.22■□□□□ 0.83
RAB5C-205ENST00000550013 XAGE3Q8WTP9 111 aa20.22■□□□□ 0.83
RAB5C-205ENST00000550013 AIDAQ96BJ3 306 aa20.22■□□□□ 0.83
RAB5C-205ENST00000550013 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
RAB5C-205ENST00000550013 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
RAB5C-205ENST00000550013 HCLS1P14317 486 aaPredicted RBP20.21■□□□□ 0.83
RAB5C-205ENST00000550013 LMOD3Q0VAK6 560 aa20.21■□□□□ 0.83
RAB5C-205ENST00000550013 RALBP1Q15311 655 aa20.21■□□□□ 0.83
RAB5C-205ENST00000550013 CCDC146Q8IYE0 955 aa20.21■□□□□ 0.83
RAB5C-205ENST00000550013 WBP1LQ9NX94 342 aa20.21■□□□□ 0.83
RAB5C-205ENST00000550013 ABT1Q9ULW3 272 aaKnown RBP20.21■□□□□ 0.83
RAB5C-205ENST00000550013 TRPM7Q96QT4 1865 aa20.21■□□□□ 0.83
RAB5C-205ENST00000550013 CTCFP49711 727 aaPredicted RBP20.2■□□□□ 0.82
RAB5C-205ENST00000550013 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
RAB5C-205ENST00000550013 NLRP10Q86W26 655 aa20.2■□□□□ 0.82
RAB5C-205ENST00000550013 TMX4Q9H1E5 349 aaPredicted RBP20.2■□□□□ 0.82
RAB5C-205ENST00000550013 PRDM10Q9NQV6 1147 aa20.2■□□□□ 0.82
RAB5C-205ENST00000550013 USP50Q70EL3 339 aaPredicted RBP20.19■□□□□ 0.82
RAB5C-205ENST00000550013 ZNF428Q96B54 188 aa20.19■□□□□ 0.82
RAB5C-205ENST00000550013 WDR33Q9C0J8 1336 aaKnown RBP20.19■□□□□ 0.82
RAB5C-205ENST00000550013 TRAF5O00463 557 aa20.18■□□□□ 0.82
RAB5C-205ENST00000550013 CXCL9Q07325 125 aa20.18■□□□□ 0.82
RAB5C-205ENST00000550013 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
RAB5C-205ENST00000550013 HSP90AB3PQ58FF7 597 aa20.18■□□□□ 0.82
RAB5C-205ENST00000550013 RTFDC1Q9BY42 306 aaPredicted RBP20.18■□□□□ 0.82
RAB5C-205ENST00000550013 TRMT112Q9UI30 125 aaKnown RBP20.18■□□□□ 0.82
RAB5C-205ENST00000550013 LBX1P52954 281 aa20.17■□□□□ 0.82
RAB5C-205ENST00000550013 DPP8Q6V1X1 898 aaPredicted RBP20.17■□□□□ 0.82
RAB5C-205ENST00000550013 SP8Q8IXZ3 490 aa20.17■□□□□ 0.82
RAB5C-205ENST00000550013 SUPT20HQ8NEM7 779 aa20.17■□□□□ 0.82
RAB5C-205ENST00000550013 VPS33BQ9H267 617 aa20.17■□□□□ 0.82
RAB5C-205ENST00000550013 GPRC5DQ9NZD1 345 aa20.17■□□□□ 0.82
RAB5C-205ENST00000550013 ZNRF3Q9ULT6 936 aa20.17■□□□□ 0.82
RAB5C-205ENST00000550013 DDX60Q8IY21 1712 aaKnown RBP20.16■□□□□ 0.82
RAB5C-205ENST00000550013 CHL1O00533 1208 aa20.16■□□□□ 0.82
RAB5C-205ENST00000550013 BBOX1O75936 387 aa20.16■□□□□ 0.82
RAB5C-205ENST00000550013 GMPSP49915 693 aaPredicted RBP20.16■□□□□ 0.82
RAB5C-205ENST00000550013 MPNDQ8N594 471 aa20.16■□□□□ 0.82
RAB5C-205ENST00000550013 CHPF2Q9P2E5 772 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms