RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ERVV-1B6SEH8 477 aa12.17□□□□□ -0.46
RAB5B-206ENST00000549505 CD2BP2O95400 341 aaKnown RBP12.17□□□□□ -0.46
RAB5B-206ENST00000549505 CUL4AQ13619 759 aa12.17□□□□□ -0.46
RAB5B-206ENST00000549505 LSG1Q9H089 658 aaKnown RBP12.17□□□□□ -0.46
RAB5B-206ENST00000549505 CWC25Q9NXE8 425 aaPredicted RBP12.17□□□□□ -0.46
RAB5B-206ENST00000549505 ATP5JP18859 108 aa12.17□□□□□ -0.46
RAB5B-206ENST00000549505 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
RAB5B-206ENST00000549505 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
RAB5B-206ENST00000549505 ABCC12Q96J65 1359 aa12.17□□□□□ -0.46
RAB5B-206ENST00000549505 CSF1RP07333 972 aa12.17□□□□□ -0.46
RAB5B-206ENST00000549505 CYP19A1P11511 503 aaPredicted RBP12.17□□□□□ -0.46
RAB5B-206ENST00000549505 AK7Q96M32 723 aa12.17□□□□□ -0.46
RAB5B-206ENST00000549505 PCCAP05165 728 aaPredicted RBP12.16□□□□□ -0.46
RAB5B-206ENST00000549505 G3BP1Q13283 466 aaKnown RBP eCLIP12.16□□□□□ -0.46
RAB5B-206ENST00000549505 NUTM1Q86Y26 1132 aa12.16□□□□□ -0.46
RAB5B-206ENST00000549505 EAF2Q96CJ1 260 aaPredicted RBP12.16□□□□□ -0.46
RAB5B-206ENST00000549505 ALDH8A1Q9H2A2 487 aaPredicted RBP12.16□□□□□ -0.46
RAB5B-206ENST00000549505 IL1RAPL2Q9NP60 686 aa12.16□□□□□ -0.46
RAB5B-206ENST00000549505 NUP98P52948 1817 aa12.16□□□□□ -0.46
RAB5B-206ENST00000549505 MED23Q9ULK4 1368 aa12.16□□□□□ -0.46
RAB5B-206ENST00000549505 AIMP1Q12904 312 aaKnown RBP12.16□□□□□ -0.46
RAB5B-206ENST00000549505 ZNF609O15014 1411 aa12.16□□□□□ -0.46
RAB5B-206ENST00000549505 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
RAB5B-206ENST00000549505 MAP3K15Q6ZN16 1313 aa12.16□□□□□ -0.46
RAB5B-206ENST00000549505 PTMSP20962 102 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 MCCP23508 829 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 STRN4Q9NRL3 753 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 MYH3P11055 1940 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 STARD3NLO95772 234 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 TSGA10IPQ3SY00 556 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
RAB5B-206ENST00000549505 PALLDQ8WX93 1383 aa12.15□□□□□ -0.46
RAB5B-206ENST00000549505 ST18O60284 1047 aa12.15□□□□□ -0.47
RAB5B-206ENST00000549505 ATG9AQ7Z3C6 839 aa12.15□□□□□ -0.47
RAB5B-206ENST00000549505 RUFY2Q8WXA3 655 aa12.15□□□□□ -0.47
RAB5B-206ENST00000549505 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.47
RAB5B-206ENST00000549505 A0A087WZG4 1122 aa12.14□□□□□ -0.47
RAB5B-206ENST00000549505 EXOC5O00471 708 aa12.14□□□□□ -0.47
RAB5B-206ENST00000549505 A1BGP04217 495 aa12.14□□□□□ -0.47
RAB5B-206ENST00000549505 HSP90AB3PQ58FF7 597 aa12.14□□□□□ -0.47
RAB5B-206ENST00000549505 GIGYF2Q6Y7W6 1299 aaKnown RBP12.14□□□□□ -0.47
RAB5B-206ENST00000549505 PA2G4Q9UQ80 394 aaKnown RBP12.14□□□□□ -0.47
RAB5B-206ENST00000549505 APBB1O00213 710 aa12.14□□□□□ -0.47
RAB5B-206ENST00000549505 IL6STP40189 918 aaPredicted RBP12.14□□□□□ -0.47
RAB5B-206ENST00000549505 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.14□□□□□ -0.47
RAB5B-206ENST00000549505 SCN7AQ01118 1682 aa12.14□□□□□ -0.47
RAB5B-206ENST00000549505 BCL9LQ86UU0 1499 aa12.14□□□□□ -0.47
RAB5B-206ENST00000549505 IFIT2P09913 472 aaKnown RBP12.13□□□□□ -0.47
RAB5B-206ENST00000549505 TNNI3KQ59H18 835 aa12.13□□□□□ -0.47
RAB5B-206ENST00000549505 FPGT-TNNI3KV9GXZ4 949 aa12.13□□□□□ -0.47
RAB5B-206ENST00000549505 RTL9Q8NET4 1388 aa12.13□□□□□ -0.47
RAB5B-206ENST00000549505 FRAT2O75474 233 aaPredicted RBP12.13□□□□□ -0.47
RAB5B-206ENST00000549505 DDX54Q8TDD1 881 aaKnown RBP12.13□□□□□ -0.47
RAB5B-206ENST00000549505 IL25Q9H293 177 aa12.13□□□□□ -0.47
RAB5B-206ENST00000549505 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
RAB5B-206ENST00000549505 DDX60Q8IY21 1712 aaKnown RBP12.13□□□□□ -0.47
RAB5B-206ENST00000549505 USPL1Q5W0Q7 1092 aa12.13□□□□□ -0.47
RAB5B-206ENST00000549505 ZBTB38Q8NAP3 1195 aaPredicted RBP12.13□□□□□ -0.47
RAB5B-206ENST00000549505 TTC14Q96N46 770 aa12.13□□□□□ -0.47
RAB5B-206ENST00000549505 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
RAB5B-206ENST00000549505 ZBTB22O15209 634 aa12.12□□□□□ -0.47
RAB5B-206ENST00000549505 MCM4P33991 863 aa12.12□□□□□ -0.47
RAB5B-206ENST00000549505 IL15P40933 162 aaPredicted RBP12.12□□□□□ -0.47
RAB5B-206ENST00000549505 TSHZ3Q63HK5 1081 aa12.12□□□□□ -0.47
RAB5B-206ENST00000549505 UBE3BQ7Z3V4 1068 aa12.12□□□□□ -0.47
RAB5B-206ENST00000549505 AACSQ86V21 672 aa12.12□□□□□ -0.47
RAB5B-206ENST00000549505 HAUS7Q99871 368 aa12.12□□□□□ -0.47
RAB5B-206ENST00000549505 TOM1O60784 492 aa12.12□□□□□ -0.47
RAB5B-206ENST00000549505 ZNF512BQ96KM6 892 aaPredicted RBP12.12□□□□□ -0.47
RAB5B-206ENST00000549505 COL24A1Q17RW2 1714 aa12.12□□□□□ -0.47
RAB5B-206ENST00000549505 RPAP1Q9BWH6 1393 aaPredicted RBP12.11□□□□□ -0.47
RAB5B-206ENST00000549505 PKNOX2Q96KN3 472 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 LY75O60449 1722 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 TRIM6-TRIM34B2RNG4 842 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 NECTIN1Q15223 517 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 DNAJC10Q8IXB1 793 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
RAB5B-206ENST00000549505 MAP4K1Q92918 833 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 VPS72Q15906 364 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 ZNF34Q8IZ26 560 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 RILPL2Q969X0 211 aa12.11□□□□□ -0.47
RAB5B-206ENST00000549505 NUCB2P80303 420 aa12.1□□□□□ -0.47
RAB5B-206ENST00000549505 DBNLQ9UJU6 430 aaKnown RBP12.1□□□□□ -0.47
RAB5B-206ENST00000549505 EYA2O00167 538 aa12.1□□□□□ -0.47
RAB5B-206ENST00000549505 EIF5P55010 431 aaKnown RBP12.1□□□□□ -0.47
RAB5B-206ENST00000549505 OS9Q13438 667 aaPredicted RBP12.1□□□□□ -0.47
RAB5B-206ENST00000549505 PALD1Q9ULE6 856 aa12.1□□□□□ -0.47
RAB5B-206ENST00000549505 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
RAB5B-206ENST00000549505 LMBR1LQ6UX01 489 aa12.09□□□□□ -0.47
RAB5B-206ENST00000549505 KIF6Q6ZMV9 814 aa12.09□□□□□ -0.47
RAB5B-206ENST00000549505 SNX14Q9Y5W7 946 aa12.09□□□□□ -0.47
RAB5B-206ENST00000549505 SH3TC1Q8TE82 1336 aa12.09□□□□□ -0.47
RAB5B-206ENST00000549505 RIC1Q4ADV7 1423 aa12.09□□□□□ -0.47
RAB5B-206ENST00000549505 GSE1Q14687 1217 aa12.09□□□□□ -0.47
RAB5B-206ENST00000549505 INTS5Q6P9B9 1019 aaKnown RBP12.09□□□□□ -0.47
RAB5B-206ENST00000549505 SLKQ9H2G2 1235 aaPredicted RBP12.09□□□□□ -0.47
RAB5B-206ENST00000549505 A0A1B0GUL6 1792 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms