RNA–Protein interactions for RNA: ENST00000549500.1

PCED1B-204, Transcript of PC-esterase domain containing 1B, humanhuman

TSL 3

Gene PCED1B, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCED1B-204ENST00000549500 CCDC93Q567U6 631 aa17.03■□□□□ 0.32
PCED1B-204ENST00000549500 SOGA3Q5TF21 947 aa17.03■□□□□ 0.32
PCED1B-204ENST00000549500 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
PCED1B-204ENST00000549500 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.32
PCED1B-204ENST00000549500 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
PCED1B-204ENST00000549500 VEGFAP15692 232 aaPredicted RBP17.01■□□□□ 0.31
PCED1B-204ENST00000549500 ALDH1B1P30837 517 aa17.01■□□□□ 0.31
PCED1B-204ENST00000549500 FKBP4Q02790 459 aaKnown RBP eCLIP17.01■□□□□ 0.31
PCED1B-204ENST00000549500 PARP10Q53GL7 1025 aa17.01■□□□□ 0.31
PCED1B-204ENST00000549500 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
PCED1B-204ENST00000549500 C16orf71Q8IYS4 520 aaPredicted RBP17.01■□□□□ 0.31
PCED1B-204ENST00000549500 SYNE4Q8N205 404 aa17.01■□□□□ 0.31
PCED1B-204ENST00000549500 ZNF277Q9NRM2 450 aaPredicted RBP17.01■□□□□ 0.31
PCED1B-204ENST00000549500 COL4A5P29400 1685 aa17.01■□□□□ 0.31
PCED1B-204ENST00000549500 HOXB7P09629 217 aa17■□□□□ 0.31
PCED1B-204ENST00000549500 HTRA3P83110 453 aa17■□□□□ 0.31
PCED1B-204ENST00000549500 DUSP27Q5VZP5 1158 aa17■□□□□ 0.31
PCED1B-204ENST00000549500 NLRP10Q86W26 655 aa17■□□□□ 0.31
PCED1B-204ENST00000549500 DDNO94850 711 aaPredicted RBP16.99■□□□□ 0.31
PCED1B-204ENST00000549500 ZEB1P37275 1124 aaPredicted RBP16.99■□□□□ 0.31
PCED1B-204ENST00000549500 APLP1P51693 650 aa16.99■□□□□ 0.31
PCED1B-204ENST00000549500 FSTL1Q12841 308 aa16.99■□□□□ 0.31
PCED1B-204ENST00000549500 SLC10A5Q5PT55 438 aa16.99■□□□□ 0.31
PCED1B-204ENST00000549500 PPP1R42Q7Z4L9 355 aa16.99■□□□□ 0.31
PCED1B-204ENST00000549500 DNAJC5GQ8N7S2 189 aa16.99■□□□□ 0.31
PCED1B-204ENST00000549500 ZNF428Q96B54 188 aa16.99■□□□□ 0.31
PCED1B-204ENST00000549500 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
PCED1B-204ENST00000549500 IFT57Q9NWB7 429 aa16.99■□□□□ 0.31
PCED1B-204ENST00000549500 TAF1P21675 1872 aa16.99■□□□□ 0.31
PCED1B-204ENST00000549500 TCIRG1Q13488 830 aa16.98■□□□□ 0.31
PCED1B-204ENST00000549500 DPY19L2Q6NUT2 758 aa16.98■□□□□ 0.31
PCED1B-204ENST00000549500 RTKN2Q8IZC4 609 aa16.98■□□□□ 0.31
PCED1B-204ENST00000549500 RPGRQ92834 1020 aaKnown RBP16.98■□□□□ 0.31
PCED1B-204ENST00000549500 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
PCED1B-204ENST00000549500 DDX60Q8IY21 1712 aaKnown RBP16.97■□□□□ 0.31
PCED1B-204ENST00000549500 KCNA4P22459 653 aa16.97■□□□□ 0.31
PCED1B-204ENST00000549500 CRAMP1Q96RY5 1269 aa16.97■□□□□ 0.31
PCED1B-204ENST00000549500 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
PCED1B-204ENST00000549500 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
PCED1B-204ENST00000549500 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
PCED1B-204ENST00000549500 HSP90AB3PQ58FF7 597 aa16.96■□□□□ 0.31
PCED1B-204ENST00000549500 C8orf58Q8NAV2 365 aa16.96■□□□□ 0.31
PCED1B-204ENST00000549500 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
PCED1B-204ENST00000549500 PSMD1Q99460 953 aa16.96■□□□□ 0.31
PCED1B-204ENST00000549500 DBF4Q9UBU7 674 aaPredicted RBP16.96■□□□□ 0.31
PCED1B-204ENST00000549500 ZNF316A6NFI3 1004 aaPredicted RBP16.95■□□□□ 0.3
PCED1B-204ENST00000549500 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
PCED1B-204ENST00000549500 IARSP41252 1262 aaKnown RBP16.95■□□□□ 0.3
PCED1B-204ENST00000549500 GNAI1P63096 354 aa16.95■□□□□ 0.3
PCED1B-204ENST00000549500 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
PCED1B-204ENST00000549500 PLBD2Q8NHP8 589 aa16.95■□□□□ 0.3
PCED1B-204ENST00000549500 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
PCED1B-204ENST00000549500 NLRP3Q96P20 1036 aa16.95■□□□□ 0.3
PCED1B-204ENST00000549500 ISCA1Q9BUE6 129 aa16.95■□□□□ 0.3
PCED1B-204ENST00000549500 ABCC4O15439 1325 aa16.95■□□□□ 0.3
PCED1B-204ENST00000549500 RNF123Q5XPI4 1314 aa16.95■□□□□ 0.3
PCED1B-204ENST00000549500 COL4A1P02462 1669 aa16.94■□□□□ 0.3
PCED1B-204ENST00000549500 SCN4AP35499 1836 aa16.94■□□□□ 0.3
PCED1B-204ENST00000549500 TCERG1O14776 1098 aaKnown RBP16.94■□□□□ 0.3
PCED1B-204ENST00000549500 PPEF1O14829 653 aaPredicted RBP16.94■□□□□ 0.3
PCED1B-204ENST00000549500 L3MBTL3Q96JM7 780 aaPredicted RBP16.94■□□□□ 0.3
PCED1B-204ENST00000549500 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
PCED1B-204ENST00000549500 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
PCED1B-204ENST00000549500 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
PCED1B-204ENST00000549500 FZD9O00144 591 aa16.93■□□□□ 0.3
PCED1B-204ENST00000549500 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
PCED1B-204ENST00000549500 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
PCED1B-204ENST00000549500 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
PCED1B-204ENST00000549500 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
PCED1B-204ENST00000549500 CC2D2BQ6DHV5 1058 aa16.92■□□□□ 0.3
PCED1B-204ENST00000549500 TSR2Q969E8 191 aaKnown RBP16.92■□□□□ 0.3
PCED1B-204ENST00000549500 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
PCED1B-204ENST00000549500 ATP6V0A2Q9Y487 856 aa16.91■□□□□ 0.3
PCED1B-204ENST00000549500 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
PCED1B-204ENST00000549500 ADAMTSL1Q8N6G6 1762 aa16.9■□□□□ 0.3
PCED1B-204ENST00000549500 CCDC27Q2M243 656 aa16.9■□□□□ 0.3
PCED1B-204ENST00000549500 FAM89AQ96GI7 184 aa16.9■□□□□ 0.3
PCED1B-204ENST00000549500 TAF1DQ9H5J8 278 aaPredicted RBP16.9■□□□□ 0.3
PCED1B-204ENST00000549500 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
PCED1B-204ENST00000549500 LRRC37AA6NMS7 1700 aa16.9■□□□□ 0.3
PCED1B-204ENST00000549500 TRIM28Q13263 835 aaKnown RBP16.89■□□□□ 0.29
PCED1B-204ENST00000549500 DUOX1Q9NRD9 1551 aa16.89■□□□□ 0.29
PCED1B-204ENST00000549500 RTL5Q5HYW3 569 aaPredicted RBP16.88■□□□□ 0.29
PCED1B-204ENST00000549500 KLRG1Q96E93 195 aa16.88■□□□□ 0.29
PCED1B-204ENST00000549500 BBOX1O75936 387 aa16.87■□□□□ 0.29
PCED1B-204ENST00000549500 GRAPQ13588 217 aa16.87■□□□□ 0.29
PCED1B-204ENST00000549500 GRIPAP1Q4V328 841 aa16.87■□□□□ 0.29
PCED1B-204ENST00000549500 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
PCED1B-204ENST00000549500 LARGE2Q8N3Y3 721 aa16.87■□□□□ 0.29
PCED1B-204ENST00000549500 GRAPLQ8TC17 118 aaPredicted RBP16.87■□□□□ 0.29
PCED1B-204ENST00000549500 RTFDC1Q9BY42 306 aaPredicted RBP16.87■□□□□ 0.29
PCED1B-204ENST00000549500 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
PCED1B-204ENST00000549500 ANP32CO43423 234 aa16.86■□□□□ 0.29
PCED1B-204ENST00000549500 AOC3Q16853 763 aa16.86■□□□□ 0.29
PCED1B-204ENST00000549500 DDX46Q7L014 1031 aaKnown RBP16.86■□□□□ 0.29
PCED1B-204ENST00000549500 RIC3Q7Z5B4 369 aa16.86■□□□□ 0.29
PCED1B-204ENST00000549500 SP8Q8IXZ3 490 aa16.86■□□□□ 0.29
PCED1B-204ENST00000549500 GPC2Q8N158 579 aa16.86■□□□□ 0.29
PCED1B-204ENST00000549500 JDP2Q8WYK2 163 aa16.86■□□□□ 0.29
PCED1B-204ENST00000549500 GOLGA2Q08379 1002 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms