RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 CHAMP1Q96JM3 812 aa16.1■□□□□ 0.17
SMPDL3B-206ENST00000549094 UPF3BQ9BZI7 483 aaKnown RBP16.1■□□□□ 0.17
SMPDL3B-206ENST00000549094 PARP4Q9UKK3 1724 aaKnown RBP16.09■□□□□ 0.17
SMPDL3B-206ENST00000549094 SGSM2O43147 1006 aa16.09■□□□□ 0.17
SMPDL3B-206ENST00000549094 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
SMPDL3B-206ENST00000549094 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
SMPDL3B-206ENST00000549094 LIMCH1Q9UPQ0 1083 aa16.09■□□□□ 0.17
SMPDL3B-206ENST00000549094 PLEKHG2Q9H7P9 1386 aa16.09■□□□□ 0.17
SMPDL3B-206ENST00000549094 GNAT3A8MTJ3 354 aa16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 GADD45BO75293 160 aaPredicted RBP16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 SMAP1Q8IYB5 467 aaPredicted RBP16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 RUFY2Q8WXA3 655 aa16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 TTC14Q96N46 770 aa16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 CDCA7Q9BWT1 371 aaPredicted RBP16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 MIS18AQ9NYP9 233 aa16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 SMC3Q9UQE7 1217 aa16.08■□□□□ 0.17
SMPDL3B-206ENST00000549094 USP42Q9H9J4 1324 aaKnown RBP16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 MEGF6O75095 1541 aa16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 STX6O43752 255 aa16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 F13A1P00488 732 aa16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 POLA2Q14181 598 aa16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 BARGINQ6ZT62 677 aa16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 CCDC125Q86Z20 511 aa16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 ZSCAN31Q96LW9 406 aaPredicted RBP16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 SH2B1Q9NRF2 756 aaPredicted RBP16.08■□□□□ 0.16
SMPDL3B-206ENST00000549094 TTC41PQ6P2S7 1318 aa16.07■□□□□ 0.16
SMPDL3B-206ENST00000549094 TCHHQ07283 1943 aa16.07■□□□□ 0.16
SMPDL3B-206ENST00000549094 GOLGA6L6A8MZA4 724 aa16.07■□□□□ 0.16
SMPDL3B-206ENST00000549094 GTF2F1P35269 517 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMPDL3B-206ENST00000549094 KRT27Q7Z3Y8 459 aa16.07■□□□□ 0.16
SMPDL3B-206ENST00000549094 SNX14Q9Y5W7 946 aa16.07■□□□□ 0.16
SMPDL3B-206ENST00000549094 OVOS2A0A0G2JMS6 1433 aa16.06■□□□□ 0.16
SMPDL3B-206ENST00000549094 ADCY5O95622 1261 aa16.06■□□□□ 0.16
SMPDL3B-206ENST00000549094 SPTLC3Q9NUV7 552 aa16.06■□□□□ 0.16
SMPDL3B-206ENST00000549094 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.06■□□□□ 0.16
SMPDL3B-206ENST00000549094 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
SMPDL3B-206ENST00000549094 SPG7Q9UQ90 795 aa16.06■□□□□ 0.16
SMPDL3B-206ENST00000549094 DISP2A7MBM2 1401 aa16.06■□□□□ 0.16
SMPDL3B-206ENST00000549094 PI4K2BQ8TCG2 481 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 RHPN1Q8TCX5 695 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 LSG1Q9H089 658 aaKnown RBP16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 CNPY2Q9Y2B0 182 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 KDM3BQ7LBC6 1761 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 A0A0G2JS52 829 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 HOXB7P09629 217 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 AK2P54819 239 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 NOLC1Q14978 699 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 GPATCH3Q96I76 525 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 TM6SF1Q9BZW5 370 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 USP44Q9H0E7 712 aa16.05■□□□□ 0.16
SMPDL3B-206ENST00000549094 KDM4AO75164 1064 aa16.04■□□□□ 0.16
SMPDL3B-206ENST00000549094 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-206ENST00000549094 GLRX3O76003 335 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-206ENST00000549094 CHAF1AQ13111 956 aaPredicted RBP16.04■□□□□ 0.16
SMPDL3B-206ENST00000549094 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
SMPDL3B-206ENST00000549094 ZCRB1Q8TBF4 217 aaKnown RBP16.04■□□□□ 0.16
SMPDL3B-206ENST00000549094 CCDC94Q9BW85 323 aaPredicted RBP16.04■□□□□ 0.16
SMPDL3B-206ENST00000549094 SYT1P21579 422 aa16.03■□□□□ 0.16
SMPDL3B-206ENST00000549094 HDGFL1Q5TGJ6 251 aa16.03■□□□□ 0.16
SMPDL3B-206ENST00000549094 VPS53Q5VIR6 699 aa16.03■□□□□ 0.16
SMPDL3B-206ENST00000549094 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
SMPDL3B-206ENST00000549094 IL1RAPL2Q9NP60 686 aa16.03■□□□□ 0.16
SMPDL3B-206ENST00000549094 DIAPH3Q9NSV4 1193 aa16.03■□□□□ 0.16
SMPDL3B-206ENST00000549094 HDAC5Q9UQL6 1122 aa16.03■□□□□ 0.16
SMPDL3B-206ENST00000549094 PKD1L3Q7Z443 1732 aa16.02■□□□□ 0.16
SMPDL3B-206ENST00000549094 EXOC5O00471 708 aa16.02■□□□□ 0.16
SMPDL3B-206ENST00000549094 HCLS1P14317 486 aaPredicted RBP16.02■□□□□ 0.16
SMPDL3B-206ENST00000549094 PPP1R42Q7Z4L9 355 aa16.02■□□□□ 0.16
SMPDL3B-206ENST00000549094 NUTM1Q86Y26 1132 aa16.02■□□□□ 0.16
SMPDL3B-206ENST00000549094 CCDC171Q6TFL3 1326 aa16.02■□□□□ 0.16
SMPDL3B-206ENST00000549094 C1orf141Q5JVX7 400 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 RUFY3Q7L099 469 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 FUCA2Q9BTY2 467 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 HIP1O00291 1037 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 FIBPO43427 364 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 CCDC192P0DO97 292 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 DDB1Q16531 1140 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 FOXD4L6Q3SYB3 417 aaPredicted RBP16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 FOXD4L3Q6VB84 417 aaPredicted RBP16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 ERC1Q8IUD2 1116 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 KCNB2Q92953 911 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 PCDH11XQ9BZA7 1347 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 PCDH11YQ9BZA8 1340 aa16.01■□□□□ 0.15
SMPDL3B-206ENST00000549094 TNS1Q9HBL0 1735 aaKnown RBP16■□□□□ 0.15
SMPDL3B-206ENST00000549094 SRGAP3O43295 1099 aa16■□□□□ 0.15
SMPDL3B-206ENST00000549094 CASTP20810 708 aaKnown RBP16■□□□□ 0.15
SMPDL3B-206ENST00000549094 AKAP4Q5JQC9 854 aa16■□□□□ 0.15
SMPDL3B-206ENST00000549094 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
SMPDL3B-206ENST00000549094 IL25Q9H293 177 aa16■□□□□ 0.15
SMPDL3B-206ENST00000549094 PDRG1Q9NUG6 133 aa16■□□□□ 0.15
SMPDL3B-206ENST00000549094 CYP46A1Q9Y6A2 500 aa16■□□□□ 0.15
SMPDL3B-206ENST00000549094 TNS2Q63HR2 1409 aa15.99■□□□□ 0.15
SMPDL3B-206ENST00000549094 GJB2P29033 226 aa15.99■□□□□ 0.15
SMPDL3B-206ENST00000549094 KIF3AQ9Y496 699 aa15.99■□□□□ 0.15
SMPDL3B-206ENST00000549094 ELP1O95163 1332 aa15.98■□□□□ 0.15
SMPDL3B-206ENST00000549094 PHKG2P15735 406 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms