RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PSMD1Q99460 953 aa21.82■■□□□ 1.08
SSH1-208ENST00000548522 NYXQ9GZU5 481 aa21.82■■□□□ 1.08
SSH1-208ENST00000548522 LTBP1Q14766 1721 aa21.82■■□□□ 1.08
SSH1-208ENST00000548522 RIC1Q4ADV7 1423 aa21.81■■□□□ 1.08
SSH1-208ENST00000548522 TMEM88BA6NKF7 163 aa21.81■■□□□ 1.08
SSH1-208ENST00000548522 NFE2L2Q16236 605 aa21.81■■□□□ 1.08
SSH1-208ENST00000548522 SUSD4Q5VX71 490 aa21.81■■□□□ 1.08
SSH1-208ENST00000548522 NUP98P52948 1817 aa21.8■■□□□ 1.08
SSH1-208ENST00000548522 IBTKQ9P2D0 1353 aaPredicted RBP21.8■■□□□ 1.08
SSH1-208ENST00000548522 GPC2Q8N158 579 aa21.8■■□□□ 1.08
SSH1-208ENST00000548522 PNISRQ8TF01 805 aaKnown RBP21.8■■□□□ 1.08
SSH1-208ENST00000548522 RPGRQ92834 1020 aaKnown RBP21.8■■□□□ 1.08
SSH1-208ENST00000548522 TCERG1O14776 1098 aaKnown RBP21.79■■□□□ 1.08
SSH1-208ENST00000548522 NTSR2O95665 410 aa21.79■■□□□ 1.08
SSH1-208ENST00000548522 HOXA10P31260 410 aaPredicted RBP21.79■■□□□ 1.08
SSH1-208ENST00000548522 GJA3Q9Y6H8 435 aa21.79■■□□□ 1.08
SSH1-208ENST00000548522 CNTROBQ8N137 903 aa21.78■■□□□ 1.08
SSH1-208ENST00000548522 NEFMP07197 916 aa21.77■■□□□ 1.08
SSH1-208ENST00000548522 FMR1Q06787 632 aaKnown RBP eCLIP21.77■■□□□ 1.08
SSH1-208ENST00000548522 LRP10Q7Z4F1 713 aa21.77■■□□□ 1.08
SSH1-208ENST00000548522 PNMA8AQ86V59 439 aaPredicted RBP21.77■■□□□ 1.08
SSH1-208ENST00000548522 ZNF34Q8IZ26 560 aa21.77■■□□□ 1.08
SSH1-208ENST00000548522 JDP2Q8WYK2 163 aa21.77■■□□□ 1.08
SSH1-208ENST00000548522 PPEF1O14829 653 aaPredicted RBP21.76■■□□□ 1.07
SSH1-208ENST00000548522 SCNN1DP51172 638 aa21.76■■□□□ 1.07
SSH1-208ENST00000548522 PROSER3Q2NL68 480 aa21.76■■□□□ 1.07
SSH1-208ENST00000548522 ANXA1P04083 346 aa21.75■■□□□ 1.07
SSH1-208ENST00000548522 LARGE2Q8N3Y3 721 aa21.75■■□□□ 1.07
SSH1-208ENST00000548522 RASSF10A6NK89 507 aa21.74■■□□□ 1.07
SSH1-208ENST00000548522 EPS15P42566 896 aa21.74■■□□□ 1.07
SSH1-208ENST00000548522 EIF6P56537 245 aaKnown RBP21.74■■□□□ 1.07
SSH1-208ENST00000548522 PDIA6Q15084 440 aa21.74■■□□□ 1.07
SSH1-208ENST00000548522 CC2D2BQ6DHV5 1058 aa21.74■■□□□ 1.07
SSH1-208ENST00000548522 GIGYF2Q6Y7W6 1299 aaKnown RBP21.74■■□□□ 1.07
SSH1-208ENST00000548522 TSPYL4Q9UJ04 414 aa21.74■■□□□ 1.07
SSH1-208ENST00000548522 MAPK8IP3Q9UPT6 1336 aa21.74■■□□□ 1.07
SSH1-208ENST00000548522 RBM17Q96I25 401 aaKnown RBP21.73■■□□□ 1.07
SSH1-208ENST00000548522 CRAMP1Q96RY5 1269 aa21.73■■□□□ 1.07
SSH1-208ENST00000548522 WBP1LQ9NX94 342 aa21.73■■□□□ 1.07
SSH1-208ENST00000548522 AIDAQ96BJ3 306 aa21.72■■□□□ 1.07
SSH1-208ENST00000548522 ERBB4Q15303 1308 aa21.72■■□□□ 1.07
SSH1-208ENST00000548522 EIF2S2P20042 333 aaKnown RBP21.71■■□□□ 1.07
SSH1-208ENST00000548522 CTCFP49711 727 aaPredicted RBP21.71■■□□□ 1.07
SSH1-208ENST00000548522 AOC3Q16853 763 aa21.71■■□□□ 1.07
SSH1-208ENST00000548522 PRDM10Q9NQV6 1147 aa21.71■■□□□ 1.07
SSH1-208ENST00000548522 DDX21Q9NR30 783 aaKnown RBP eCLIP21.71■■□□□ 1.07
SSH1-208ENST00000548522 ABT1Q9ULW3 272 aaKnown RBP21.71■■□□□ 1.07
SSH1-208ENST00000548522 TRAF5O00463 557 aa21.7■■□□□ 1.06
SSH1-208ENST00000548522 PPIP5K2O43314 1243 aa21.7■■□□□ 1.06
SSH1-208ENST00000548522 LMOD1P29536 600 aaPredicted RBP21.7■■□□□ 1.06
SSH1-208ENST00000548522 LBX1P52954 281 aa21.7■■□□□ 1.06
SSH1-208ENST00000548522 DEFB115Q30KQ5 88 aa21.7■■□□□ 1.06
SSH1-208ENST00000548522 ABCC4O15439 1325 aa21.7■■□□□ 1.06
SSH1-208ENST00000548522 PARP10Q53GL7 1025 aa21.69■■□□□ 1.06
SSH1-208ENST00000548522 NIM1KQ8IY84 436 aa21.69■■□□□ 1.06
SSH1-208ENST00000548522 NECTIN2Q92692 538 aa21.69■■□□□ 1.06
SSH1-208ENST00000548522 PPP1R42Q7Z4L9 355 aa21.68■■□□□ 1.06
SSH1-208ENST00000548522 ZNF428Q96B54 188 aa21.68■■□□□ 1.06
SSH1-208ENST00000548522 UTP14AQ9BVJ6 771 aaKnown RBP21.68■■□□□ 1.06
SSH1-208ENST00000548522 ATP6V0A2Q9Y487 856 aa21.68■■□□□ 1.06
SSH1-208ENST00000548522 WDR33Q9C0J8 1336 aaKnown RBP21.68■■□□□ 1.06
SSH1-208ENST00000548522 HSPA8P11142 646 aaKnown RBP21.67■■□□□ 1.06
SSH1-208ENST00000548522 RIPK4P57078 832 aa21.67■■□□□ 1.06
SSH1-208ENST00000548522 NLRP3Q96P20 1036 aa21.67■■□□□ 1.06
SSH1-208ENST00000548522 THSD7BQ9C0I4 1608 aa21.66■■□□□ 1.06
SSH1-208ENST00000548522 HCLS1P14317 486 aaPredicted RBP21.66■■□□□ 1.06
SSH1-208ENST00000548522 KRT24Q2M2I5 525 aa21.66■■□□□ 1.06
SSH1-208ENST00000548522 GRIPAP1Q4V328 841 aa21.66■■□□□ 1.06
SSH1-208ENST00000548522 SLC10A5Q5PT55 438 aa21.66■■□□□ 1.06
SSH1-208ENST00000548522 CST9Q5W186 159 aa21.65■■□□□ 1.06
SSH1-208ENST00000548522 CXCL9Q07325 125 aa21.64■■□□□ 1.05
SSH1-208ENST00000548522 AIMP1Q12904 312 aaKnown RBP21.64■■□□□ 1.05
SSH1-208ENST00000548522 GRM1Q13255 1194 aa21.64■■□□□ 1.05
SSH1-208ENST00000548522 CYP4F22Q6NT55 531 aa21.64■■□□□ 1.05
SSH1-208ENST00000548522 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
SSH1-208ENST00000548522 COPS6Q7L5N1 327 aa21.64■■□□□ 1.05
SSH1-208ENST00000548522 NLRP10Q86W26 655 aa21.64■■□□□ 1.05
SSH1-208ENST00000548522 XAGE3Q8WTP9 111 aa21.64■■□□□ 1.05
SSH1-208ENST00000548522 GPRC5DQ9NZD1 345 aa21.64■■□□□ 1.05
SSH1-208ENST00000548522 LAMB2P55268 1798 aa21.64■■□□□ 1.05
SSH1-208ENST00000548522 TMPOP42166 694 aaKnown RBP21.63■■□□□ 1.05
SSH1-208ENST00000548522 PAXIP1Q6ZW49 1069 aaPredicted RBP21.63■■□□□ 1.05
SSH1-208ENST00000548522 CAPNS2Q96L46 248 aa21.63■■□□□ 1.05
SSH1-208ENST00000548522 RTFDC1Q9BY42 306 aaPredicted RBP21.63■■□□□ 1.05
SSH1-208ENST00000548522 PNNQ9H307 717 aaKnown RBP21.63■■□□□ 1.05
SSH1-208ENST00000548522 DUOX1Q9NRD9 1551 aa21.62■■□□□ 1.05
SSH1-208ENST00000548522 ANKRD36CQ5JPF3 1778 aa21.62■■□□□ 1.05
SSH1-208ENST00000548522 GMPSP49915 693 aaPredicted RBP21.62■■□□□ 1.05
SSH1-208ENST00000548522 ZNRF3Q9ULT6 936 aa21.62■■□□□ 1.05
SSH1-208ENST00000548522 DPP8Q6V1X1 898 aaPredicted RBP21.61■■□□□ 1.05
SSH1-208ENST00000548522 ADARB2Q9NS39 739 aaKnown RBP21.61■■□□□ 1.05
SSH1-208ENST00000548522 SHTN1A0MZ66 631 aa21.6■■□□□ 1.05
SSH1-208ENST00000548522 MAP2K1Q02750 393 aaPredicted RBP21.6■■□□□ 1.05
SSH1-208ENST00000548522 CCDC146Q8IYE0 955 aa21.6■■□□□ 1.05
SSH1-208ENST00000548522 TMX4Q9H1E5 349 aaPredicted RBP21.6■■□□□ 1.05
SSH1-208ENST00000548522 COL4A1P02462 1669 aa21.6■■□□□ 1.05
SSH1-208ENST00000548522 RAD17O75943 681 aa21.59■■□□□ 1.05
SSH1-208ENST00000548522 KIAA2012Q0VF49 1180 aa21.59■■□□□ 1.05
SSH1-208ENST00000548522 SP8Q8IXZ3 490 aa21.59■■□□□ 1.05
SSH1-208ENST00000548522 GLIS2Q9BZE0 524 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms