RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 DDX21Q9NR30 783 aaKnown RBP eCLIP21.03■□□□□ 0.96
RAPGEF3-217ENST00000548434 SCN4AP35499 1836 aa21.02■□□□□ 0.96
RAPGEF3-217ENST00000548434 COPS6Q7L5N1 327 aa21.02■□□□□ 0.96
RAPGEF3-217ENST00000548434 SMC1BQ8NDV3 1235 aa21.02■□□□□ 0.96
RAPGEF3-217ENST00000548434 PARP10Q53GL7 1025 aa21.01■□□□□ 0.95
RAPGEF3-217ENST00000548434 DPY19L2Q6NUT2 758 aa21.01■□□□□ 0.95
RAPGEF3-217ENST00000548434 RTKN2Q8IZC4 609 aa21.01■□□□□ 0.95
RAPGEF3-217ENST00000548434 L3MBTL3Q96JM7 780 aaPredicted RBP21.01■□□□□ 0.95
RAPGEF3-217ENST00000548434 CFAP44Q96MT7 982 aa21.01■□□□□ 0.95
RAPGEF3-217ENST00000548434 CRAMP1Q96RY5 1269 aa21.01■□□□□ 0.95
RAPGEF3-217ENST00000548434 ZNF277Q9NRM2 450 aaPredicted RBP21.01■□□□□ 0.95
RAPGEF3-217ENST00000548434 WDR43Q15061 677 aaKnown RBP eCLIP21■□□□□ 0.95
RAPGEF3-217ENST00000548434 XAGE3Q8WTP9 111 aa21■□□□□ 0.95
RAPGEF3-217ENST00000548434 PSMD1Q99460 953 aa21■□□□□ 0.95
RAPGEF3-217ENST00000548434 FZD9O00144 591 aa20.99■□□□□ 0.95
RAPGEF3-217ENST00000548434 HOXB7P09629 217 aa20.99■□□□□ 0.95
RAPGEF3-217ENST00000548434 NLRP10Q86W26 655 aa20.99■□□□□ 0.95
RAPGEF3-217ENST00000548434 SYNE4Q8N205 404 aa20.99■□□□□ 0.95
RAPGEF3-217ENST00000548434 JMYQ8N9B5 988 aa20.99■□□□□ 0.95
RAPGEF3-217ENST00000548434 NECTIN2Q92692 538 aa20.99■□□□□ 0.95
RAPGEF3-217ENST00000548434 TAF1P21675 1872 aa20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 ADAMTSL1Q8N6G6 1762 aa20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 POTEIP0CG38 1075 aa20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 POTEJP0CG39 1038 aa20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 GTF2E1P29083 439 aaPredicted RBP20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 TCIRG1Q13488 830 aa20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 CCDC184Q52MB2 194 aa20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 PPP1R42Q7Z4L9 355 aa20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 ZNF541Q9H0D2 1346 aa20.98■□□□□ 0.95
RAPGEF3-217ENST00000548434 KLRG1Q96E93 195 aa20.97■□□□□ 0.95
RAPGEF3-217ENST00000548434 MBIPQ9NS73 344 aa20.97■□□□□ 0.95
RAPGEF3-217ENST00000548434 CHPF2Q9P2E5 772 aa20.97■□□□□ 0.95
RAPGEF3-217ENST00000548434 DDX60Q8IY21 1712 aaKnown RBP20.96■□□□□ 0.95
RAPGEF3-217ENST00000548434 APAF1O14727 1248 aa20.96■□□□□ 0.95
RAPGEF3-217ENST00000548434 IARSP41252 1262 aaKnown RBP20.96■□□□□ 0.95
RAPGEF3-217ENST00000548434 CC2D2BQ6DHV5 1058 aa20.96■□□□□ 0.95
RAPGEF3-217ENST00000548434 UTP14AQ9BVJ6 771 aaKnown RBP20.96■□□□□ 0.95
RAPGEF3-217ENST00000548434 RNF123Q5XPI4 1314 aa20.95■□□□□ 0.94
RAPGEF3-217ENST00000548434 AIMP1Q12904 312 aaKnown RBP20.94■□□□□ 0.94
RAPGEF3-217ENST00000548434 ISCA1Q9BUE6 129 aa20.94■□□□□ 0.94
RAPGEF3-217ENST00000548434 TAF1DQ9H5J8 278 aaPredicted RBP20.94■□□□□ 0.94
RAPGEF3-217ENST00000548434 LAS1LQ9Y4W2 734 aaKnown RBP20.94■□□□□ 0.94
RAPGEF3-217ENST00000548434 LTBP1Q14766 1721 aa20.93■□□□□ 0.94
RAPGEF3-217ENST00000548434 DUSP27Q5VZP5 1158 aa20.93■□□□□ 0.94
RAPGEF3-217ENST00000548434 RPGRQ92834 1020 aaKnown RBP20.93■□□□□ 0.94
RAPGEF3-217ENST00000548434 RBM17Q96I25 401 aaKnown RBP20.93■□□□□ 0.94
RAPGEF3-217ENST00000548434 NLRP3Q96P20 1036 aa20.93■□□□□ 0.94
RAPGEF3-217ENST00000548434 HSP90AB3PQ58FF7 597 aa20.92■□□□□ 0.94
RAPGEF3-217ENST00000548434 HDGFL1Q5TGJ6 251 aa20.92■□□□□ 0.94
RAPGEF3-217ENST00000548434 PLBD2Q8NHP8 589 aa20.92■□□□□ 0.94
RAPGEF3-217ENST00000548434 IFT57Q9NWB7 429 aa20.92■□□□□ 0.94
RAPGEF3-217ENST00000548434 ABCC4O15439 1325 aa20.92■□□□□ 0.94
RAPGEF3-217ENST00000548434 COL4A1P02462 1669 aa20.92■□□□□ 0.94
RAPGEF3-217ENST00000548434 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
RAPGEF3-217ENST00000548434 GRIPAP1Q4V328 841 aa20.91■□□□□ 0.94
RAPGEF3-217ENST00000548434 CHADLQ6NUI6 762 aa20.91■□□□□ 0.94
RAPGEF3-217ENST00000548434 RTFDC1Q9BY42 306 aaPredicted RBP20.91■□□□□ 0.94
RAPGEF3-217ENST00000548434 DBF4Q9UBU7 674 aaPredicted RBP20.91■□□□□ 0.94
RAPGEF3-217ENST00000548434 ATP6V0A2Q9Y487 856 aa20.91■□□□□ 0.94
RAPGEF3-217ENST00000548434 PASKQ96RG2 1323 aa20.9■□□□□ 0.94
RAPGEF3-217ENST00000548434 PPEF1O14829 653 aaPredicted RBP20.9■□□□□ 0.94
RAPGEF3-217ENST00000548434 ITGBL1O95965 494 aaPredicted RBP20.9■□□□□ 0.94
RAPGEF3-217ENST00000548434 TRIM28Q13263 835 aaKnown RBP20.9■□□□□ 0.94
RAPGEF3-217ENST00000548434 ANKRD13DQ6ZTN6 518 aa20.9■□□□□ 0.94
RAPGEF3-217ENST00000548434 LRRC37AA6NMS7 1700 aa20.89■□□□□ 0.93
RAPGEF3-217ENST00000548434 GPC2Q8N158 579 aa20.88■□□□□ 0.93
RAPGEF3-217ENST00000548434 C8orf58Q8NAV2 365 aa20.88■□□□□ 0.93
RAPGEF3-217ENST00000548434 HYPKQ9NX55 129 aa20.88■□□□□ 0.93
RAPGEF3-217ENST00000548434 SH3TC1Q8TE82 1336 aa20.87■□□□□ 0.93
RAPGEF3-217ENST00000548434 IQCA1LA6NCM1 817 aa20.87■□□□□ 0.93
RAPGEF3-217ENST00000548434 BBOX1O75936 387 aa20.87■□□□□ 0.93
RAPGEF3-217ENST00000548434 IFFO2Q5TF58 517 aa20.87■□□□□ 0.93
RAPGEF3-217ENST00000548434 LDHDQ86WU2 507 aa20.87■□□□□ 0.93
RAPGEF3-217ENST00000548434 SP8Q8IXZ3 490 aa20.87■□□□□ 0.93
RAPGEF3-217ENST00000548434 TRMT112Q9UI30 125 aaKnown RBP20.87■□□□□ 0.93
RAPGEF3-217ENST00000548434 DUOX1Q9NRD9 1551 aa20.87■□□□□ 0.93
RAPGEF3-217ENST00000548434 GNAI1P63096 354 aa20.86■□□□□ 0.93
RAPGEF3-217ENST00000548434 VPS33BQ9H267 617 aa20.86■□□□□ 0.93
RAPGEF3-217ENST00000548434 PHAXQ9H814 394 aaKnown RBP20.86■□□□□ 0.93
RAPGEF3-217ENST00000548434 SF3B3Q15393 1217 aaKnown RBP20.85■□□□□ 0.93
RAPGEF3-217ENST00000548434 HACL1Q9UJ83 578 aa20.85■□□□□ 0.93
RAPGEF3-217ENST00000548434 ATP5J2-PTCD1G3V325 749 aa20.84■□□□□ 0.93
RAPGEF3-217ENST00000548434 TCERG1O14776 1098 aaKnown RBP20.84■□□□□ 0.93
RAPGEF3-217ENST00000548434 EPHX2P34913 555 aa20.84■□□□□ 0.93
RAPGEF3-217ENST00000548434 SCNN1DP51172 638 aa20.84■□□□□ 0.93
RAPGEF3-217ENST00000548434 CCDC27Q2M243 656 aa20.84■□□□□ 0.93
RAPGEF3-217ENST00000548434 TSPYL6Q8N831 410 aa20.84■□□□□ 0.93
RAPGEF3-217ENST00000548434 FAM89AQ96GI7 184 aa20.84■□□□□ 0.93
RAPGEF3-217ENST00000548434 GRAPQ13588 217 aa20.83■□□□□ 0.93
RAPGEF3-217ENST00000548434 GRAPLQ8TC17 118 aaPredicted RBP20.83■□□□□ 0.93
RAPGEF3-217ENST00000548434 ZNF428Q96B54 188 aa20.83■□□□□ 0.93
RAPGEF3-217ENST00000548434 NCBP3Q53F19 620 aaKnown RBP20.82■□□□□ 0.92
RAPGEF3-217ENST00000548434 LARGE2Q8N3Y3 721 aa20.82■□□□□ 0.92
RAPGEF3-217ENST00000548434 JDP2Q8WYK2 163 aa20.82■□□□□ 0.92
RAPGEF3-217ENST00000548434 CREBZFQ9NS37 354 aa20.82■□□□□ 0.92
RAPGEF3-217ENST00000548434 ELL2O00472 640 aaPredicted RBP20.81■□□□□ 0.92
RAPGEF3-217ENST00000548434 CALD1Q05682 793 aaKnown RBP20.81■□□□□ 0.92
RAPGEF3-217ENST00000548434 AOC3Q16853 763 aa20.81■□□□□ 0.92
RAPGEF3-217ENST00000548434 WWC1Q8IX03 1113 aa20.8■□□□□ 0.92
RAPGEF3-217ENST00000548434 CELF1Q92879 486 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms