RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 SNED1Q8TER0 1413 aa27.99■■■□□ 2.07
USP44-204ENST00000547951 DDNO94850 711 aaPredicted RBP27.97■■■□□ 2.07
USP44-204ENST00000547951 ALDH1B1P30837 517 aa27.97■■■□□ 2.07
USP44-204ENST00000547951 FKBP4Q02790 459 aaKnown RBP eCLIP27.97■■■□□ 2.07
USP44-204ENST00000547951 ZNF428Q96B54 188 aa27.97■■■□□ 2.07
USP44-204ENST00000547951 DDX21Q9NR30 783 aaKnown RBP eCLIP27.97■■■□□ 2.07
USP44-204ENST00000547951 DPY19L2Q6NUT2 758 aa27.96■■■□□ 2.07
USP44-204ENST00000547951 DNAJC5GQ8N7S2 189 aa27.96■■■□□ 2.07
USP44-204ENST00000547951 MBIPQ9NS73 344 aa27.96■■■□□ 2.07
USP44-204ENST00000547951 HOXA10P31260 410 aaPredicted RBP27.95■■■□□ 2.06
USP44-204ENST00000547951 PARP10Q53GL7 1025 aa27.95■■■□□ 2.06
USP44-204ENST00000547951 SYNE4Q8N205 404 aa27.95■■■□□ 2.06
USP44-204ENST00000547951 RPGRQ92834 1020 aaKnown RBP27.95■■■□□ 2.06
USP44-204ENST00000547951 CFAP44Q96MT7 982 aa27.95■■■□□ 2.06
USP44-204ENST00000547951 LAMB2P55268 1798 aa27.95■■■□□ 2.06
USP44-204ENST00000547951 HDGFL1Q5TGJ6 251 aa27.94■■■□□ 2.06
USP44-204ENST00000547951 PPP1R42Q7Z4L9 355 aa27.94■■■□□ 2.06
USP44-204ENST00000547951 SMC1BQ8NDV3 1235 aa27.94■■■□□ 2.06
USP44-204ENST00000547951 ZNF853P0CG23 659 aa27.93■■■□□ 2.06
USP44-204ENST00000547951 RTKN2Q8IZC4 609 aa27.93■■■□□ 2.06
USP44-204ENST00000547951 UTP14AQ9BVJ6 771 aaKnown RBP27.93■■■□□ 2.06
USP44-204ENST00000547951 ZNF541Q9H0D2 1346 aa27.92■■■□□ 2.06
USP44-204ENST00000547951 COL4A5P29400 1685 aa27.92■■■□□ 2.06
USP44-204ENST00000547951 TCERG1O14776 1098 aaKnown RBP27.92■■■□□ 2.06
USP44-204ENST00000547951 DUSP27Q5VZP5 1158 aa27.92■■■□□ 2.06
USP44-204ENST00000547951 NLRP10Q86W26 655 aa27.92■■■□□ 2.06
USP44-204ENST00000547951 POTEIP0CG38 1075 aa27.9■■■□□ 2.06
USP44-204ENST00000547951 POTEJP0CG39 1038 aa27.9■■■□□ 2.06
USP44-204ENST00000547951 HCLS1P14317 486 aaPredicted RBP27.89■■■□□ 2.06
USP44-204ENST00000547951 IARSP41252 1262 aaKnown RBP27.89■■■□□ 2.06
USP44-204ENST00000547951 TCIRG1Q13488 830 aa27.89■■■□□ 2.06
USP44-204ENST00000547951 SLC10A5Q5PT55 438 aa27.89■■■□□ 2.06
USP44-204ENST00000547951 RBM17Q96I25 401 aaKnown RBP27.89■■■□□ 2.06
USP44-204ENST00000547951 CRAMP1Q96RY5 1269 aa27.89■■■□□ 2.06
USP44-204ENST00000547951 HOXB7P09629 217 aa27.88■■■□□ 2.05
USP44-204ENST00000547951 TAF1P21675 1872 aa27.87■■■□□ 2.05
USP44-204ENST00000547951 PPEF1O14829 653 aaPredicted RBP27.87■■■□□ 2.05
USP44-204ENST00000547951 NLRP3Q96P20 1036 aa27.87■■■□□ 2.05
USP44-204ENST00000547951 IFT57Q9NWB7 429 aa27.87■■■□□ 2.05
USP44-204ENST00000547951 ELL2O00472 640 aaPredicted RBP27.86■■■□□ 2.05
USP44-204ENST00000547951 HSP90AB3PQ58FF7 597 aa27.86■■■□□ 2.05
USP44-204ENST00000547951 PSMD1Q99460 953 aa27.86■■■□□ 2.05
USP44-204ENST00000547951 DBF4Q9UBU7 674 aaPredicted RBP27.86■■■□□ 2.05
USP44-204ENST00000547951 DDX60Q8IY21 1712 aaKnown RBP27.85■■■□□ 2.05
USP44-204ENST00000547951 PLBD2Q8NHP8 589 aa27.85■■■□□ 2.05
USP44-204ENST00000547951 TRMT112Q9UI30 125 aaKnown RBP27.85■■■□□ 2.05
USP44-204ENST00000547951 ABCC4O15439 1325 aa27.85■■■□□ 2.05
USP44-204ENST00000547951 L3MBTL3Q96JM7 780 aaPredicted RBP27.84■■■□□ 2.05
USP44-204ENST00000547951 SCN4AP35499 1836 aa27.83■■■□□ 2.05
USP44-204ENST00000547951 ATP5J2-PTCD1G3V325 749 aa27.83■■■□□ 2.05
USP44-204ENST00000547951 ANKRD13DQ6ZTN6 518 aa27.83■■■□□ 2.05
USP44-204ENST00000547951 C8orf58Q8NAV2 365 aa27.83■■■□□ 2.05
USP44-204ENST00000547951 FZD9O00144 591 aa27.82■■■□□ 2.04
USP44-204ENST00000547951 GNAI1P63096 354 aa27.82■■■□□ 2.04
USP44-204ENST00000547951 CC2D2BQ6DHV5 1058 aa27.82■■■□□ 2.04
USP44-204ENST00000547951 ISCA1Q9BUE6 129 aa27.82■■■□□ 2.04
USP44-204ENST00000547951 RNF123Q5XPI4 1314 aa27.82■■■□□ 2.04
USP44-204ENST00000547951 ZEB1P37275 1124 aaPredicted RBP27.81■■■□□ 2.04
USP44-204ENST00000547951 PHAXQ9H814 394 aaKnown RBP27.81■■■□□ 2.04
USP44-204ENST00000547951 HYPKQ9NX55 129 aa27.81■■■□□ 2.04
USP44-204ENST00000547951 SH3TC1Q8TE82 1336 aa27.81■■■□□ 2.04
USP44-204ENST00000547951 KLRG1Q96E93 195 aa27.8■■■□□ 2.04
USP44-204ENST00000547951 TAF1DQ9H5J8 278 aaPredicted RBP27.8■■■□□ 2.04
USP44-204ENST00000547951 COL4A1P02462 1669 aa27.8■■■□□ 2.04
USP44-204ENST00000547951 ATP6V0A2Q9Y487 856 aa27.79■■■□□ 2.04
USP44-204ENST00000547951 PCNTO95613 3336 aa27.79■■■□□ 2.04
USP44-204ENST00000547951 CALD1Q05682 793 aaKnown RBP27.78■■■□□ 2.04
USP44-204ENST00000547951 CHADLQ6NUI6 762 aa27.78■■■□□ 2.04
USP44-204ENST00000547951 FAM89AQ96GI7 184 aa27.78■■■□□ 2.04
USP44-204ENST00000547951 RTL5Q5HYW3 569 aaPredicted RBP27.77■■■□□ 2.04
USP44-204ENST00000547951 LARGE2Q8N3Y3 721 aa27.77■■■□□ 2.04
USP44-204ENST00000547951 TSPYL6Q8N831 410 aa27.77■■■□□ 2.04
USP44-204ENST00000547951 TSR2Q969E8 191 aaKnown RBP27.77■■■□□ 2.04
USP44-204ENST00000547951 LTBP1Q14766 1721 aa27.76■■■□□ 2.03
USP44-204ENST00000547951 IQCA1LA6NCM1 817 aa27.76■■■□□ 2.03
USP44-204ENST00000547951 ZNF316A6NFI3 1004 aaPredicted RBP27.76■■■□□ 2.03
USP44-204ENST00000547951 JDP2Q8WYK2 163 aa27.76■■■□□ 2.03
USP44-204ENST00000547951 ADAMTSL1Q8N6G6 1762 aa27.75■■■□□ 2.03
USP44-204ENST00000547951 AOC3Q16853 763 aa27.74■■■□□ 2.03
USP44-204ENST00000547951 EAPPQ56P03 285 aaPredicted RBP27.74■■■□□ 2.03
USP44-204ENST00000547951 GPC2Q8N158 579 aa27.74■■■□□ 2.03
USP44-204ENST00000547951 HACL1Q9UJ83 578 aa27.74■■■□□ 2.03
USP44-204ENST00000547951 GJA3Q9Y6H8 435 aa27.74■■■□□ 2.03
USP44-204ENST00000547951 EPHX2P34913 555 aa27.73■■■□□ 2.03
USP44-204ENST00000547951 GRIPAP1Q4V328 841 aa27.73■■■□□ 2.03
USP44-204ENST00000547951 DDX46Q7L014 1031 aaKnown RBP27.73■■■□□ 2.03
USP44-204ENST00000547951 PPIP5K2O43314 1243 aa27.72■■■□□ 2.03
USP44-204ENST00000547951 BBOX1O75936 387 aa27.72■■■□□ 2.03
USP44-204ENST00000547951 GRAPQ13588 217 aa27.72■■■□□ 2.03
USP44-204ENST00000547951 RIC3Q7Z5B4 369 aa27.72■■■□□ 2.03
USP44-204ENST00000547951 LDHDQ86WU2 507 aa27.72■■■□□ 2.03
USP44-204ENST00000547951 SP8Q8IXZ3 490 aa27.72■■■□□ 2.03
USP44-204ENST00000547951 GRAPLQ8TC17 118 aaPredicted RBP27.72■■■□□ 2.03
USP44-204ENST00000547951 MRS2Q9HD23 443 aa27.72■■■□□ 2.03
USP44-204ENST00000547951 DUOX1Q9NRD9 1551 aa27.72■■■□□ 2.03
USP44-204ENST00000547951 LRRC37AA6NMS7 1700 aa27.71■■■□□ 2.03
USP44-204ENST00000547951 EIF6P56537 245 aaKnown RBP27.71■■■□□ 2.03
USP44-204ENST00000547951 GOLGA2Q08379 1002 aa27.71■■■□□ 2.03
USP44-204ENST00000547951 WWC1Q8IX03 1113 aa27.71■■■□□ 2.03
USP44-204ENST00000547951 JMYQ8N9B5 988 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms