RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 PTPN14Q15678 1187 aa17.91■□□□□ 0.46
BRF1-211ENST00000547530 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
BRF1-211ENST00000547530 ABCC3O15438 1527 aa17.91■□□□□ 0.46
BRF1-211ENST00000547530 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
BRF1-211ENST00000547530 PTCD1O75127 700 aaKnown RBP17.91■□□□□ 0.46
BRF1-211ENST00000547530 GOLGA8FQ08AF8 430 aa17.91■□□□□ 0.46
BRF1-211ENST00000547530 GOLGA8DPQ0D2H9 430 aa17.91■□□□□ 0.46
BRF1-211ENST00000547530 ZSWIM4Q9H7M6 989 aa17.91■□□□□ 0.46
BRF1-211ENST00000547530 RGS12O14924 1447 aa17.9■□□□□ 0.46
BRF1-211ENST00000547530 HAND2P61296 217 aa17.9■□□□□ 0.46
BRF1-211ENST00000547530 ZNF530Q6P9A1 599 aaPredicted RBP17.9■□□□□ 0.46
BRF1-211ENST00000547530 ARHGEF40Q8TER5 1519 aa17.9■□□□□ 0.46
BRF1-211ENST00000547530 CD163L1Q9NR16 1453 aa17.9■□□□□ 0.46
BRF1-211ENST00000547530 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
BRF1-211ENST00000547530 ATP2B1P20020 1258 aa17.9■□□□□ 0.46
BRF1-211ENST00000547530 NCBP1Q09161 790 aaKnown RBP17.9■□□□□ 0.46
BRF1-211ENST00000547530 ZNF589Q86UQ0 364 aaPredicted RBP17.9■□□□□ 0.46
BRF1-211ENST00000547530 AOPEPQ8N6M6 819 aa17.9■□□□□ 0.46
BRF1-211ENST00000547530 TCHHQ07283 1943 aa17.89■□□□□ 0.45
BRF1-211ENST00000547530 CCDC73Q6ZRK6 1079 aa17.89■□□□□ 0.45
BRF1-211ENST00000547530 ZFYVE9O95405 1425 aa17.89■□□□□ 0.45
BRF1-211ENST00000547530 TTLL5Q6EMB2 1281 aa17.89■□□□□ 0.45
BRF1-211ENST00000547530 C11orf57Q6ZUT1 292 aaPredicted RBP17.89■□□□□ 0.45
BRF1-211ENST00000547530 CCAR1Q8IX12 1150 aaKnown RBP17.89■□□□□ 0.45
BRF1-211ENST00000547530 LEO1Q8WVC0 666 aaPredicted RBP17.89■□□□□ 0.45
BRF1-211ENST00000547530 KINO60870 393 aaKnown RBP17.88■□□□□ 0.45
BRF1-211ENST00000547530 GJB4Q9NTQ9 266 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 ZNF75DP51815 510 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 Q6ZUG5 572 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 EAF2Q96CJ1 260 aaPredicted RBP17.88■□□□□ 0.45
BRF1-211ENST00000547530 A0A0G2JS52 829 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 A0A1B0GVL5 298 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 SLC27A2O14975 620 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 TTC14Q96N46 770 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 SNRKQ9NRH2 765 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 CHD1O14646 1710 aa17.88■□□□□ 0.45
BRF1-211ENST00000547530 RNF20Q5VTR2 975 aa17.87■□□□□ 0.45
BRF1-211ENST00000547530 CCDC69A6NI79 296 aa17.87■□□□□ 0.45
BRF1-211ENST00000547530 APOBRQ0VD83 1088 aa17.87■□□□□ 0.45
BRF1-211ENST00000547530 PDILTQ8N807 584 aa17.87■□□□□ 0.45
BRF1-211ENST00000547530 CHMP4CQ96CF2 233 aa17.87■□□□□ 0.45
BRF1-211ENST00000547530 CHMP4AQ9BY43 222 aa17.87■□□□□ 0.45
BRF1-211ENST00000547530 EPC1Q9H2F5 836 aa17.87■□□□□ 0.45
BRF1-211ENST00000547530 SSH3Q8TE77 659 aa17.86■□□□□ 0.45
BRF1-211ENST00000547530 CCDC171Q6TFL3 1326 aa17.86■□□□□ 0.45
BRF1-211ENST00000547530 ST3GAL1Q11201 340 aa17.86■□□□□ 0.45
BRF1-211ENST00000547530 SYT10Q6XYQ8 523 aa17.86■□□□□ 0.45
BRF1-211ENST00000547530 TMC6Q7Z403 805 aa17.86■□□□□ 0.45
BRF1-211ENST00000547530 FSIP1Q8NA03 581 aa17.85■□□□□ 0.45
BRF1-211ENST00000547530 BICC1Q9H694 974 aaKnown RBP17.85■□□□□ 0.45
BRF1-211ENST00000547530 PPP6R1Q9UPN7 881 aa17.85■□□□□ 0.45
BRF1-211ENST00000547530 PSMA5P28066 241 aa17.85■□□□□ 0.45
BRF1-211ENST00000547530 LMOD1P29536 600 aaPredicted RBP17.85■□□□□ 0.45
BRF1-211ENST00000547530 GTF2F1P35269 517 aaKnown RBP eCLIP17.85■□□□□ 0.45
BRF1-211ENST00000547530 PDCP20941 246 aa17.85■□□□□ 0.45
BRF1-211ENST00000547530 ERCC6LQ2NKX8 1250 aa17.85■□□□□ 0.45
BRF1-211ENST00000547530 PGBD1Q96JS3 809 aa17.85■□□□□ 0.45
BRF1-211ENST00000547530 ZSCAN31Q96LW9 406 aaPredicted RBP17.85■□□□□ 0.45
BRF1-211ENST00000547530 ADGRB2O60241 1585 aa17.84■□□□□ 0.45
BRF1-211ENST00000547530 VPS53Q5VIR6 699 aa17.84■□□□□ 0.45
BRF1-211ENST00000547530 STAP2Q9UGK3 403 aa17.84■□□□□ 0.45
BRF1-211ENST00000547530 ADGRB3O60242 1522 aa17.84■□□□□ 0.45
BRF1-211ENST00000547530 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
BRF1-211ENST00000547530 RXRAP19793 462 aa17.83■□□□□ 0.45
BRF1-211ENST00000547530 CCDC82Q8N4S0 544 aa17.83■□□□□ 0.45
BRF1-211ENST00000547530 SCAND2PQ9GZW5 306 aaPredicted RBP17.83■□□□□ 0.45
BRF1-211ENST00000547530 A0A0G2JLW4 131 aa17.83■□□□□ 0.45
BRF1-211ENST00000547530 GPHNQ9NQX3 736 aaPredicted RBP17.83■□□□□ 0.45
BRF1-211ENST00000547530 SH2B1Q9NRF2 756 aaPredicted RBP17.83■□□□□ 0.45
BRF1-211ENST00000547530 MARCKSP29966 332 aaPredicted RBP17.83■□□□□ 0.44
BRF1-211ENST00000547530 SETD1BQ9UPS6 1966 aaKnown RBP17.83■□□□□ 0.44
BRF1-211ENST00000547530 HSP90AB4PQ58FF6 505 aa17.82■□□□□ 0.44
BRF1-211ENST00000547530 C1orf141Q5JVX7 400 aa17.82■□□□□ 0.44
BRF1-211ENST00000547530 MYD88Q99836 296 aa17.82■□□□□ 0.44
BRF1-211ENST00000547530 AMOTL2Q9Y2J4 779 aa17.82■□□□□ 0.44
BRF1-211ENST00000547530 CPS1P31327 1500 aa17.82■□□□□ 0.44
BRF1-211ENST00000547530 SUCLG2Q96I99 432 aa17.82■□□□□ 0.44
BRF1-211ENST00000547530 EDC4Q6P2E9 1401 aaKnown RBP17.82■□□□□ 0.44
BRF1-211ENST00000547530 URI1O94763 535 aaPredicted RBP17.82■□□□□ 0.44
BRF1-211ENST00000547530 FKBP4Q02790 459 aaKnown RBP eCLIP17.81■□□□□ 0.44
BRF1-211ENST00000547530 EVI5LQ96CN4 794 aa17.81■□□□□ 0.44
BRF1-211ENST00000547530 UHRF1BP1LA0JNW5 1464 aa17.81■□□□□ 0.44
BRF1-211ENST00000547530 GOLIM4O00461 696 aa17.81■□□□□ 0.44
BRF1-211ENST00000547530 WASHC4Q2M389 1173 aa17.81■□□□□ 0.44
BRF1-211ENST00000547530 PTPRMP28827 1452 aa17.81■□□□□ 0.44
BRF1-211ENST00000547530 NEK1Q96PY6 1258 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 ZSWIM6Q9HCJ5 1215 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 SPTLC3Q9NUV7 552 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 DNAI1Q9UI46 699 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 SALL3Q9BXA9 1300 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 STK38Q15208 465 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 UBE3BQ7Z3V4 1068 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 CCDC34Q96HJ3 373 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 IFNKQ9P0W0 207 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 NRXN1Q9ULB1 1477 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 LRRN4CLQ8ND94 238 aa17.8■□□□□ 0.44
BRF1-211ENST00000547530 TPM3P06753 285 aa17.79■□□□□ 0.44
BRF1-211ENST00000547530 SMTNL1A8MU46 457 aa17.79■□□□□ 0.44
BRF1-211ENST00000547530 ZC3H6P61129 1189 aaKnown RBP17.79■□□□□ 0.44
BRF1-211ENST00000547530 BEND3Q5T5X7 828 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms