RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 ITGAEP38570 1179 aa11.2□□□□□ -0.62
HIF1A-205ENST00000547430 ORC1Q13415 861 aa11.2□□□□□ -0.62
HIF1A-205ENST00000547430 FAM161BQ96MY7 647 aa11.2□□□□□ -0.62
HIF1A-205ENST00000547430 DNAJC25Q9H1X3 360 aa11.2□□□□□ -0.62
HIF1A-205ENST00000547430 TIMMDC1Q9NPL8 285 aa11.2□□□□□ -0.62
HIF1A-205ENST00000547430 FAM187AA6NFU0 413 aa11.19□□□□□ -0.62
HIF1A-205ENST00000547430 RHOQP17081 205 aa11.19□□□□□ -0.62
HIF1A-205ENST00000547430 SCARF1Q14162 830 aa11.19□□□□□ -0.62
HIF1A-205ENST00000547430 XKR5Q6UX68 686 aa11.19□□□□□ -0.62
HIF1A-205ENST00000547430 TTC16Q8NEE8 873 aa11.19□□□□□ -0.62
HIF1A-205ENST00000547430 EIF1AYO14602 144 aaKnown RBP11.18□□□□□ -0.62
HIF1A-205ENST00000547430 SORBS3O60504 671 aa11.18□□□□□ -0.62
HIF1A-205ENST00000547430 BMP1P13497 986 aa11.18□□□□□ -0.62
HIF1A-205ENST00000547430 SMCPP49901 116 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-205ENST00000547430 LRRC69Q6ZNQ3 347 aa11.18□□□□□ -0.62
HIF1A-205ENST00000547430 TRIM46Q7Z4K8 759 aa11.18□□□□□ -0.62
HIF1A-205ENST00000547430 MRS2Q9HD23 443 aa11.18□□□□□ -0.62
HIF1A-205ENST00000547430 PSMD2Q13200 908 aa11.17□□□□□ -0.62
HIF1A-205ENST00000547430 TRIP4Q15650 581 aaPredicted RBP11.17□□□□□ -0.62
HIF1A-205ENST00000547430 ARSJQ5FYB0 599 aaPredicted RBP11.17□□□□□ -0.62
HIF1A-205ENST00000547430 CRISPLD1Q9H336 500 aa11.17□□□□□ -0.62
HIF1A-205ENST00000547430 NEUROD4Q9HD90 331 aa11.17□□□□□ -0.62
HIF1A-205ENST00000547430 RTCBQ9Y3I0 505 aaKnown RBP11.17□□□□□ -0.62
HIF1A-205ENST00000547430 KCNMB2Q9Y691 235 aa11.17□□□□□ -0.62
HIF1A-205ENST00000547430 A0A1W2PNR3 127 aa11.16□□□□□ -0.62
HIF1A-205ENST00000547430 SCAMP3O14828 347 aaKnown RBP11.16□□□□□ -0.62
HIF1A-205ENST00000547430 GNA15P30679 374 aa11.16□□□□□ -0.62
HIF1A-205ENST00000547430 TYRO3Q06418 890 aa11.16□□□□□ -0.62
HIF1A-205ENST00000547430 PDE12Q6L8Q7 609 aaKnown RBP11.16□□□□□ -0.62
HIF1A-205ENST00000547430 FNDC3AQ9Y2H6 1198 aaKnown RBP11.16□□□□□ -0.62
HIF1A-205ENST00000547430 USP20Q9Y2K6 914 aa11.16□□□□□ -0.62
HIF1A-205ENST00000547430 CPNE3O75131 537 aaKnown RBP11.15□□□□□ -0.62
HIF1A-205ENST00000547430 GRNP28799 593 aaKnown RBP11.15□□□□□ -0.62
HIF1A-205ENST00000547430 CTC1Q2NKJ3 1217 aa11.15□□□□□ -0.62
HIF1A-205ENST00000547430 FIGNL2A6NMB9 653 aa11.14□□□□□ -0.63
HIF1A-205ENST00000547430 TNFRSF21O75509 655 aa11.14□□□□□ -0.63
HIF1A-205ENST00000547430 FRMD6Q96NE9 622 aa11.14□□□□□ -0.63
HIF1A-205ENST00000547430 C8orf37Q96NL8 207 aa11.14□□□□□ -0.63
HIF1A-205ENST00000547430 VTI1BQ9UEU0 232 aa11.14□□□□□ -0.63
HIF1A-205ENST00000547430 FOXD3Q9UJU5 478 aaPredicted RBP11.14□□□□□ -0.63
HIF1A-205ENST00000547430 DYRK1BQ9Y463 629 aa11.14□□□□□ -0.63
HIF1A-205ENST00000547430 ZNF438Q7Z4V0 828 aa11.13□□□□□ -0.63
HIF1A-205ENST00000547430 CMTR1Q8N1G2 835 aaKnown RBP11.13□□□□□ -0.63
HIF1A-205ENST00000547430 SNX29Q8TEQ0 813 aa11.13□□□□□ -0.63
HIF1A-205ENST00000547430 UBAP1LF5GYI3 381 aa11.12□□□□□ -0.63
HIF1A-205ENST00000547430 EPB42P16452 691 aa11.12□□□□□ -0.63
HIF1A-205ENST00000547430 HDLBPQ00341 1268 aaKnown RBP11.12□□□□□ -0.63
HIF1A-205ENST00000547430 SAMD5Q5TGI4 173 aa11.12□□□□□ -0.63
HIF1A-205ENST00000547430 ZFP42Q96MM3 310 aa11.12□□□□□ -0.63
HIF1A-205ENST00000547430 DNMT3LQ9UJW3 386 aa11.12□□□□□ -0.63
HIF1A-205ENST00000547430 F11P03951 625 aa11.11□□□□□ -0.63
HIF1A-205ENST00000547430 NLRP8Q86W28 1048 aa11.11□□□□□ -0.63
HIF1A-205ENST00000547430 CRIPAKQ8N1N5 446 aa11.11□□□□□ -0.63
HIF1A-205ENST00000547430 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
HIF1A-205ENST00000547430 RUBCNLQ9H714 662 aa11.11□□□□□ -0.63
HIF1A-205ENST00000547430 GPAMQ9HCL2 828 aa11.11□□□□□ -0.63
HIF1A-205ENST00000547430 GJA3Q9Y6H8 435 aa11.11□□□□□ -0.63
HIF1A-205ENST00000547430 AK5Q9Y6K8 562 aa11.11□□□□□ -0.63
HIF1A-205ENST00000547430 DGAT1O75907 488 aa11.1□□□□□ -0.63
HIF1A-205ENST00000547430 EGFRP00533 1210 aa11.1□□□□□ -0.63
HIF1A-205ENST00000547430 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
HIF1A-205ENST00000547430 CEP63Q96MT8 703 aa11.1□□□□□ -0.63
HIF1A-205ENST00000547430 ELP3Q9H9T3 547 aa11.1□□□□□ -0.63
HIF1A-205ENST00000547430 C11orf16Q9NQ32 467 aa11.1□□□□□ -0.63
HIF1A-205ENST00000547430 METTL5Q9NRN9 209 aaKnown RBP11.1□□□□□ -0.63
HIF1A-205ENST00000547430 TMEM63CQ9P1W3 806 aa11.1□□□□□ -0.63
HIF1A-205ENST00000547430 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
HIF1A-205ENST00000547430 ZFYVE28Q9HCC9 887 aa11.09□□□□□ -0.63
HIF1A-205ENST00000547430 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
HIF1A-205ENST00000547430 FANCCQ00597 558 aa11.08□□□□□ -0.64
HIF1A-205ENST00000547430 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.08□□□□□ -0.64
HIF1A-205ENST00000547430 METTL16Q86W50 562 aaKnown RBP11.08□□□□□ -0.64
HIF1A-205ENST00000547430 PGBD3Q8N328 593 aa11.08□□□□□ -0.64
HIF1A-205ENST00000547430 CCDC74AQ96AQ1 378 aa11.08□□□□□ -0.64
HIF1A-205ENST00000547430 BRD7Q9NPI1 651 aa11.08□□□□□ -0.64
HIF1A-205ENST00000547430 SENP3-EIF4A1A0A087X0R7 540 aa11.07□□□□□ -0.64
HIF1A-205ENST00000547430 AXIN1O15169 862 aa11.07□□□□□ -0.64
HIF1A-205ENST00000547430 PHACTR2O75167 634 aa11.07□□□□□ -0.64
HIF1A-205ENST00000547430 XYLBO75191 536 aa11.07□□□□□ -0.64
HIF1A-205ENST00000547430 CTSHP09668 335 aa11.07□□□□□ -0.64
HIF1A-205ENST00000547430 ERCC5P28715 1186 aaPredicted RBP11.07□□□□□ -0.64
HIF1A-205ENST00000547430 LBRQ14739 615 aaKnown RBP11.07□□□□□ -0.64
HIF1A-205ENST00000547430 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.07□□□□□ -0.64
HIF1A-205ENST00000547430 CRELD1Q96HD1 420 aa11.07□□□□□ -0.64
HIF1A-205ENST00000547430 CHRDQ9H2X0 955 aa11.07□□□□□ -0.64
HIF1A-205ENST00000547430 KCNQ4P56696 695 aa11.06□□□□□ -0.64
HIF1A-205ENST00000547430 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
HIF1A-205ENST00000547430 GAS2L1Q99501 681 aaPredicted RBP11.06□□□□□ -0.64
HIF1A-205ENST00000547430 EIF4BP23588 611 aaKnown RBP11.05□□□□□ -0.64
HIF1A-205ENST00000547430 RAD51AP2Q09MP3 1159 aa11.05□□□□□ -0.64
HIF1A-205ENST00000547430 PI16Q6UXB8 463 aa11.05□□□□□ -0.64
HIF1A-205ENST00000547430 EPS8L3Q8TE67 593 aaKnown RBP11.05□□□□□ -0.64
HIF1A-205ENST00000547430 ZCCHC2Q9C0B9 1178 aaKnown RBP11.05□□□□□ -0.64
HIF1A-205ENST00000547430 C12orf49Q9H741 205 aa11.05□□□□□ -0.64
HIF1A-205ENST00000547430 ABI2Q9NYB9 513 aaPredicted RBP11.05□□□□□ -0.64
HIF1A-205ENST00000547430 USP35Q9P2H5 1018 aa11.05□□□□□ -0.64
HIF1A-205ENST00000547430 NRG2O14511 850 aaPredicted RBP11.04□□□□□ -0.64
HIF1A-205ENST00000547430 GIPC1O14908 333 aa11.04□□□□□ -0.64
HIF1A-205ENST00000547430 IRS1P35568 1242 aa11.04□□□□□ -0.64
HIF1A-205ENST00000547430 EFHC2Q5JST6 749 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms