RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 C5P01031 1676 aa9.85□□□□□ -0.83
CCDC60-205ENST00000546345 PCNTO95613 3336 aa9.84□□□□□ -0.83
CCDC60-205ENST00000546345 CFAP99D6REC4 459 aa9.84□□□□□ -0.83
CCDC60-205ENST00000546345 DDB1Q16531 1140 aa9.84□□□□□ -0.83
CCDC60-205ENST00000546345 TSC1Q92574 1164 aa9.84□□□□□ -0.83
CCDC60-205ENST00000546345 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
CCDC60-205ENST00000546345 NFAT5O94916 1531 aa9.83□□□□□ -0.84
CCDC60-205ENST00000546345 JUNDP17535 347 aa9.83□□□□□ -0.84
CCDC60-205ENST00000546345 MMP16P51512 607 aa9.83□□□□□ -0.84
CCDC60-205ENST00000546345 DESI1Q6ICB0 168 aa9.83□□□□□ -0.84
CCDC60-205ENST00000546345 PRDM9Q9NQV7 894 aa9.83□□□□□ -0.84
CCDC60-205ENST00000546345 POGKQ9P215 609 aa9.83□□□□□ -0.84
CCDC60-205ENST00000546345 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
CCDC60-205ENST00000546345 PKD1L3Q7Z443 1732 aa9.82□□□□□ -0.84
CCDC60-205ENST00000546345 KIF13BQ9NQT8 1826 aa9.82□□□□□ -0.84
CCDC60-205ENST00000546345 DXOO77932 396 aaKnown RBP9.82□□□□□ -0.84
CCDC60-205ENST00000546345 RFC5P40937 340 aa9.82□□□□□ -0.84
CCDC60-205ENST00000546345 HELBQ8NG08 1087 aaPredicted RBP9.82□□□□□ -0.84
CCDC60-205ENST00000546345 KIAA1210Q9ULL0 1709 aa9.82□□□□□ -0.84
CCDC60-205ENST00000546345 PNPLA7Q6ZV29 1317 aa9.82□□□□□ -0.84
CCDC60-205ENST00000546345 LRRC4BQ9NT99 713 aa9.81□□□□□ -0.84
CCDC60-205ENST00000546345 TRAK1Q9UPV9 953 aa9.81□□□□□ -0.84
CCDC60-205ENST00000546345 UBR3Q6ZT12 1888 aa9.81□□□□□ -0.84
CCDC60-205ENST00000546345 ACEP12821 1306 aa9.81□□□□□ -0.84
CCDC60-205ENST00000546345 MON2Q7Z3U7 1717 aa9.8□□□□□ -0.84
CCDC60-205ENST00000546345 RNF223E7ERA6 249 aa9.8□□□□□ -0.84
CCDC60-205ENST00000546345 PPEF1O14829 653 aaPredicted RBP9.8□□□□□ -0.84
CCDC60-205ENST00000546345 GCP02774 474 aa9.8□□□□□ -0.84
CCDC60-205ENST00000546345 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
CCDC60-205ENST00000546345 COL13A1Q5TAT6 717 aaPredicted RBP9.8□□□□□ -0.84
CCDC60-205ENST00000546345 DNAJC5GQ8N7S2 189 aa9.8□□□□□ -0.84
CCDC60-205ENST00000546345 NUDT16Q96DE0 195 aaKnown RBP9.8□□□□□ -0.84
CCDC60-205ENST00000546345 RGPD2P0DJD1 1756 aa9.8□□□□□ -0.84
CCDC60-205ENST00000546345 WDR17Q8IZU2 1322 aa9.8□□□□□ -0.84
CCDC60-205ENST00000546345 BRD4O60885 1362 aaPredicted RBP9.79□□□□□ -0.84
CCDC60-205ENST00000546345 AP1G2O75843 785 aa9.79□□□□□ -0.84
CCDC60-205ENST00000546345 ANKLE1Q8NAG6 615 aa9.79□□□□□ -0.84
CCDC60-205ENST00000546345 FAM208AQ9UK61 1670 aaKnown RBP9.79□□□□□ -0.84
CCDC60-205ENST00000546345 PPIP5K1Q6PFW1 1433 aa9.79□□□□□ -0.84
CCDC60-205ENST00000546345 N4BP2Q86UW6 1770 aaPredicted RBP9.78□□□□□ -0.84
CCDC60-205ENST00000546345 LYPD8Q6UX82 237 aa9.78□□□□□ -0.84
CCDC60-205ENST00000546345 ZNF526Q8TF50 670 aaPredicted RBP9.78□□□□□ -0.84
CCDC60-205ENST00000546345 USP6P35125 1406 aa9.78□□□□□ -0.84
CCDC60-205ENST00000546345 CTDSPL2Q05D32 466 aa9.77□□□□□ -0.85
CCDC60-205ENST00000546345 PTPRNQ16849 979 aa9.77□□□□□ -0.85
CCDC60-205ENST00000546345 CCDC24Q8N4L8 307 aa9.77□□□□□ -0.85
CCDC60-205ENST00000546345 ABTB2Q8N961 1025 aa9.77□□□□□ -0.85
CCDC60-205ENST00000546345 NUDT12Q9BQG2 462 aa9.77□□□□□ -0.85
CCDC60-205ENST00000546345 FCF1Q9Y324 198 aaKnown RBP9.77□□□□□ -0.85
CCDC60-205ENST00000546345 ZEB1P37275 1124 aaPredicted RBP9.76□□□□□ -0.85
CCDC60-205ENST00000546345 TOM1L2Q6ZVM7 507 aa9.76□□□□□ -0.85
CCDC60-205ENST00000546345 ARFGEF1Q9Y6D6 1849 aa9.75□□□□□ -0.85
CCDC60-205ENST00000546345 TNRC6CQ9HCJ0 1690 aaKnown RBP9.75□□□□□ -0.85
CCDC60-205ENST00000546345 GRIN3BO60391 1043 aa9.75□□□□□ -0.85
CCDC60-205ENST00000546345 PRELPP51888 382 aa9.75□□□□□ -0.85
CCDC60-205ENST00000546345 NSD2O96028 1365 aa9.75□□□□□ -0.85
CCDC60-205ENST00000546345 PER1O15534 1290 aaPredicted RBP9.74□□□□□ -0.85
CCDC60-205ENST00000546345 CCNYL3P0C7X3 344 aa9.74□□□□□ -0.85
CCDC60-205ENST00000546345 POLD1P28340 1107 aa9.74□□□□□ -0.85
CCDC60-205ENST00000546345 BANK1Q8NDB2 785 aa9.74□□□□□ -0.85
CCDC60-205ENST00000546345 SLC16A10Q8TF71 515 aa9.74□□□□□ -0.85
CCDC60-205ENST00000546345 ACSBG1Q96GR2 724 aa9.74□□□□□ -0.85
CCDC60-205ENST00000546345 CDCA7Q9BWT1 371 aaPredicted RBP9.74□□□□□ -0.85
CCDC60-205ENST00000546345 EVA1BQ9NVM1 165 aa9.74□□□□□ -0.85
CCDC60-205ENST00000546345 ITGB4P16144 1822 aa9.74□□□□□ -0.85
CCDC60-205ENST00000546345 SBF1O95248 1867 aa9.74□□□□□ -0.85
CCDC60-205ENST00000546345 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
CCDC60-205ENST00000546345 NLRP13Q86W25 1043 aa9.73□□□□□ -0.85
CCDC60-205ENST00000546345 PPARGC1BQ86YN6 1023 aaKnown RBP9.73□□□□□ -0.85
CCDC60-205ENST00000546345 MPHOSPH9Q99550 1183 aa9.73□□□□□ -0.85
CCDC60-205ENST00000546345 CARD10Q9BWT7 1032 aa9.73□□□□□ -0.85
CCDC60-205ENST00000546345 CCDC7Q96M83 1385 aa9.73□□□□□ -0.85
CCDC60-205ENST00000546345 C4BP0C0L5 1744 aa9.73□□□□□ -0.85
CCDC60-205ENST00000546345 ZBTB24O43167 697 aaPredicted RBP9.72□□□□□ -0.85
CCDC60-205ENST00000546345 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
CCDC60-205ENST00000546345 CTHP32929 405 aa9.72□□□□□ -0.85
CCDC60-205ENST00000546345 JMYQ8N9B5 988 aa9.72□□□□□ -0.85
CCDC60-205ENST00000546345 CDK19Q9BWU1 502 aa9.72□□□□□ -0.85
CCDC60-205ENST00000546345 MAP2P11137 1827 aaKnown RBP9.72□□□□□ -0.85
CCDC60-205ENST00000546345 KCNQ4P56696 695 aa9.71□□□□□ -0.86
CCDC60-205ENST00000546345 HTRA3P83110 453 aa9.71□□□□□ -0.86
CCDC60-205ENST00000546345 KCNH2Q12809 1159 aa9.71□□□□□ -0.86
CCDC60-205ENST00000546345 LRRN4Q8WUT4 740 aa9.71□□□□□ -0.86
CCDC60-205ENST00000546345 PLA2G2CQ5R387 149 aa9.7□□□□□ -0.86
CCDC60-205ENST00000546345 ARHGEF25Q86VW2 580 aa9.7□□□□□ -0.86
CCDC60-205ENST00000546345 TNS4Q8IZW8 715 aa9.7□□□□□ -0.86
CCDC60-205ENST00000546345 SLC19A1P41440 591 aa9.69□□□□□ -0.86
CCDC60-205ENST00000546345 EXOC5O00471 708 aa9.68□□□□□ -0.86
CCDC60-205ENST00000546345 RGS20O76081 388 aa9.68□□□□□ -0.86
CCDC60-205ENST00000546345 F12P00748 615 aaPredicted RBP9.68□□□□□ -0.86
CCDC60-205ENST00000546345 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
CCDC60-205ENST00000546345 PTCRAQ6ISU1 281 aaPredicted RBP9.68□□□□□ -0.86
CCDC60-205ENST00000546345 KLRG1Q96E93 195 aa9.68□□□□□ -0.86
CCDC60-205ENST00000546345 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
CCDC60-205ENST00000546345 CD2BP2O95400 341 aaKnown RBP9.67□□□□□ -0.86
CCDC60-205ENST00000546345 RPIAP49247 311 aa9.67□□□□□ -0.86
CCDC60-205ENST00000546345 SLC27A3Q5K4L6 730 aa9.67□□□□□ -0.86
CCDC60-205ENST00000546345 LIAT1Q6ZQX7 453 aa9.67□□□□□ -0.86
CCDC60-205ENST00000546345 COL23A1Q86Y22 540 aaPredicted RBP9.67□□□□□ -0.86
CCDC60-205ENST00000546345 SNRKQ9NRH2 765 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms