RNA–Protein interactions for RNA: ENST00000544882.1

SCNN1A-222, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-222ENST00000544882 DICER1Q9UPY3 1922 aaKnown RBP21.16■□□□□ 0.98
SCNN1A-222ENST00000544882 TIAM2Q8IVF5 1701 aa21.15■□□□□ 0.98
SCNN1A-222ENST00000544882 TOMM70O94826 608 aa21.15■□□□□ 0.98
SCNN1A-222ENST00000544882 PARP10Q53GL7 1025 aa21.15■□□□□ 0.98
SCNN1A-222ENST00000544882 PPP1R42Q7Z4L9 355 aa21.15■□□□□ 0.98
SCNN1A-222ENST00000544882 RRAGCQ9HB90 399 aa21.15■□□□□ 0.98
SCNN1A-222ENST00000544882 SPINK5Q9NQ38 1064 aaPredicted RBP21.15■□□□□ 0.98
SCNN1A-222ENST00000544882 NTSR2O95665 410 aa21.14■□□□□ 0.97
SCNN1A-222ENST00000544882 ALDH1B1P30837 517 aa21.14■□□□□ 0.97
SCNN1A-222ENST00000544882 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.97
SCNN1A-222ENST00000544882 IL16Q14005 1332 aa21.13■□□□□ 0.97
SCNN1A-222ENST00000544882 GLTPD2A6NH11 291 aa21.13■□□□□ 0.97
SCNN1A-222ENST00000544882 HSPA6P17066 643 aa21.13■□□□□ 0.97
SCNN1A-222ENST00000544882 CRY2Q49AN0 593 aa21.13■□□□□ 0.97
SCNN1A-222ENST00000544882 CCDC93Q567U6 631 aa21.13■□□□□ 0.97
SCNN1A-222ENST00000544882 HSP90AB3PQ58FF7 597 aa21.13■□□□□ 0.97
SCNN1A-222ENST00000544882 RIC1Q4ADV7 1423 aa21.12■□□□□ 0.97
SCNN1A-222ENST00000544882 UTP14AQ9BVJ6 771 aaKnown RBP21.12■□□□□ 0.97
SCNN1A-222ENST00000544882 DBF4Q9UBU7 674 aaPredicted RBP21.12■□□□□ 0.97
SCNN1A-222ENST00000544882 FANCIQ9NVI1 1328 aa21.11■□□□□ 0.97
SCNN1A-222ENST00000544882 OLFM4Q6UX06 510 aa21.11■□□□□ 0.97
SCNN1A-222ENST00000544882 RPGRQ92834 1020 aaKnown RBP21.11■□□□□ 0.97
SCNN1A-222ENST00000544882 TCIRG1Q13488 830 aa21.1■□□□□ 0.97
SCNN1A-222ENST00000544882 WDR63Q8IWG1 891 aa21.1■□□□□ 0.97
SCNN1A-222ENST00000544882 RBM46Q8TBY0 533 aaKnown RBP21.1■□□□□ 0.97
SCNN1A-222ENST00000544882 HOXA10P31260 410 aaPredicted RBP21.09■□□□□ 0.97
SCNN1A-222ENST00000544882 PHAXQ9H814 394 aaKnown RBP21.09■□□□□ 0.97
SCNN1A-222ENST00000544882 ZNF521Q96K83 1311 aa21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 TCERG1O14776 1098 aaKnown RBP21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 FKBP4Q02790 459 aaKnown RBP eCLIP21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 DPY19L2Q6NUT2 758 aa21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 C3orf67Q6ZVT6 689 aa21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 NLRP10Q86W26 655 aa21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 RTKN2Q8IZC4 609 aa21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 ZNF428Q96B54 188 aa21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 RBM17Q96I25 401 aaKnown RBP21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 NLRP3Q96P20 1036 aa21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 HYPKQ9NX55 129 aa21.08■□□□□ 0.97
SCNN1A-222ENST00000544882 LAMB2P55268 1798 aa21.08■□□□□ 0.96
SCNN1A-222ENST00000544882 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
SCNN1A-222ENST00000544882 SLC10A5Q5PT55 438 aa21.07■□□□□ 0.96
SCNN1A-222ENST00000544882 ANKRD13DQ6ZTN6 518 aa21.07■□□□□ 0.96
SCNN1A-222ENST00000544882 PLBD2Q8NHP8 589 aa21.07■□□□□ 0.96
SCNN1A-222ENST00000544882 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
SCNN1A-222ENST00000544882 VEGFAP15692 232 aaPredicted RBP21.06■□□□□ 0.96
SCNN1A-222ENST00000544882 SYNE4Q8N205 404 aa21.06■□□□□ 0.96
SCNN1A-222ENST00000544882 CRAMP1Q96RY5 1269 aa21.06■□□□□ 0.96
SCNN1A-222ENST00000544882 ZNF277Q9NRM2 450 aaPredicted RBP21.06■□□□□ 0.96
SCNN1A-222ENST00000544882 TWISTNBQ3B726 338 aaPredicted RBP21.05■□□□□ 0.96
SCNN1A-222ENST00000544882 TRMT112Q9UI30 125 aaKnown RBP21.05■□□□□ 0.96
SCNN1A-222ENST00000544882 CC2D2BQ6DHV5 1058 aa21.04■□□□□ 0.96
SCNN1A-222ENST00000544882 DDX60Q8IY21 1712 aaKnown RBP21.04■□□□□ 0.96
SCNN1A-222ENST00000544882 WDR90Q96KV7 1748 aa21.04■□□□□ 0.96
SCNN1A-222ENST00000544882 SH3TC1Q8TE82 1336 aa21.04■□□□□ 0.96
SCNN1A-222ENST00000544882 HCLS1P14317 486 aaPredicted RBP21.03■□□□□ 0.96
SCNN1A-222ENST00000544882 EXOSC9Q06265 439 aaKnown RBP21.03■□□□□ 0.96
SCNN1A-222ENST00000544882 FSTL1Q12841 308 aa21.03■□□□□ 0.96
SCNN1A-222ENST00000544882 CCDC30Q5VVM6 783 aa21.03■□□□□ 0.96
SCNN1A-222ENST00000544882 DIEXFQ68CQ4 756 aaKnown RBP21.03■□□□□ 0.96
SCNN1A-222ENST00000544882 MIER1Q8N108 512 aa21.03■□□□□ 0.96
SCNN1A-222ENST00000544882 ISCA1Q9BUE6 129 aa21.03■□□□□ 0.96
SCNN1A-222ENST00000544882 POTECB2RU33 542 aa21.02■□□□□ 0.96
SCNN1A-222ENST00000544882 ATP5J2-PTCD1G3V325 749 aa21.02■□□□□ 0.96
SCNN1A-222ENST00000544882 PPEF1O14829 653 aaPredicted RBP21.02■□□□□ 0.96
SCNN1A-222ENST00000544882 DDNO94850 711 aaPredicted RBP21.02■□□□□ 0.96
SCNN1A-222ENST00000544882 APLP1P51693 650 aa21.02■□□□□ 0.96
SCNN1A-222ENST00000544882 G2E3Q7L622 706 aa21.02■□□□□ 0.96
SCNN1A-222ENST00000544882 SNED1Q8TER0 1413 aa21.02■□□□□ 0.96
SCNN1A-222ENST00000544882 TAF1P21675 1872 aa21.01■□□□□ 0.95
SCNN1A-222ENST00000544882 VAMP4O75379 141 aa21.01■□□□□ 0.95
SCNN1A-222ENST00000544882 IARSP41252 1262 aaKnown RBP21.01■□□□□ 0.95
SCNN1A-222ENST00000544882 SLC51AQ86UW1 340 aa21.01■□□□□ 0.95
SCNN1A-222ENST00000544882 SMC1BQ8NDV3 1235 aa21.01■□□□□ 0.95
SCNN1A-222ENST00000544882 PSMD1Q99460 953 aa21.01■□□□□ 0.95
SCNN1A-222ENST00000544882 CACNA1FO60840 1977 aa21.01■□□□□ 0.95
SCNN1A-222ENST00000544882 GOLGA2Q08379 1002 aa21■□□□□ 0.95
SCNN1A-222ENST00000544882 RIC3Q7Z5B4 369 aa21■□□□□ 0.95
SCNN1A-222ENST00000544882 CHMP4AQ9BY43 222 aa21■□□□□ 0.95
SCNN1A-222ENST00000544882 ABCC4O15439 1325 aa21■□□□□ 0.95
SCNN1A-222ENST00000544882 GRIPAP1Q4V328 841 aa20.99■□□□□ 0.95
SCNN1A-222ENST00000544882 TMX4Q9H1E5 349 aaPredicted RBP20.98■□□□□ 0.95
SCNN1A-222ENST00000544882 TRIM28Q13263 835 aaKnown RBP20.97■□□□□ 0.95
SCNN1A-222ENST00000544882 DDX46Q7L014 1031 aaKnown RBP20.97■□□□□ 0.95
SCNN1A-222ENST00000544882 FAM89AQ96GI7 184 aa20.97■□□□□ 0.95
SCNN1A-222ENST00000544882 ATP6V0A2Q9Y487 856 aa20.97■□□□□ 0.95
SCNN1A-222ENST00000544882 ZNF541Q9H0D2 1346 aa20.97■□□□□ 0.95
SCNN1A-222ENST00000544882 COL4A1P02462 1669 aa20.96■□□□□ 0.95
SCNN1A-222ENST00000544882 BBOX1O75936 387 aa20.96■□□□□ 0.95
SCNN1A-222ENST00000544882 SLC4A2P04920 1241 aa20.96■□□□□ 0.95
SCNN1A-222ENST00000544882 JDP2Q8WYK2 163 aa20.96■□□□□ 0.95
SCNN1A-222ENST00000544882 CEP350Q5VT06 3117 aa20.95■□□□□ 0.94
SCNN1A-222ENST00000544882 FZD9O00144 591 aa20.95■□□□□ 0.94
SCNN1A-222ENST00000544882 RTL5Q5HYW3 569 aaPredicted RBP20.95■□□□□ 0.94
SCNN1A-222ENST00000544882 MYD88Q99836 296 aa20.95■□□□□ 0.94
SCNN1A-222ENST00000544882 STK31Q9BXU1 1019 aa20.95■□□□□ 0.94
SCNN1A-222ENST00000544882 MYH16Q9H6N6 1097 aa20.95■□□□□ 0.94
SCNN1A-222ENST00000544882 PI4KAP2A4QPH2 592 aa20.94■□□□□ 0.94
SCNN1A-222ENST00000544882 GRAPQ13588 217 aa20.94■□□□□ 0.94
SCNN1A-222ENST00000544882 LARGE2Q8N3Y3 721 aa20.94■□□□□ 0.94
SCNN1A-222ENST00000544882 PI4KAP1Q8N8J0 262 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms