RNA–Protein interactions for RNA: ENST00000544805.1

RNF10-222, Transcript of ring finger protein 10, human

TSL 2

Gene RNF10, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-222	ENST00000544805	WNK3	Q9BYP7	1800 aa		11.14	□□□□□ -0.63
RNF10-222	ENST00000544805	PCDH11X	Q9BZA7	1347 aa		11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	PCDH11Y	Q9BZA8	1340 aa		11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	PRIM1	P49642	420 aa	Known RBP	11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	MTHFS	P49914	203 aa		11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	PDIA6	Q15084	440 aa		11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	PTCD2	Q8WV60	388 aa	Known RBP	11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	RAI14	Q9P0K7	980 aa		11.13	□□□□□ -0.63
RNF10-222	ENST00000544805	PLSCR1	O15162	318 aa		11.12	□□□□□ -0.63
RNF10-222	ENST00000544805	RGS3	P49796	1198 aa		11.12	□□□□□ -0.63
RNF10-222	ENST00000544805	NBPF10	Q6P3W6	841 aa	Known RBP	11.12	□□□□□ -0.63
RNF10-222	ENST00000544805	PTF1A	Q7RTS3	328 aa		11.12	□□□□□ -0.63
RNF10-222	ENST00000544805	CACTIN-AS1	Q8N1I8	211 aa		11.12	□□□□□ -0.63
RNF10-222	ENST00000544805	SNRNP27	Q8WVK2	155 aa	Known RBP	11.12	□□□□□ -0.63
RNF10-222	ENST00000544805	CFAP53	Q96M91	514 aa		11.12	□□□□□ -0.63
RNF10-222	ENST00000544805	STK32B	Q9NY57	414 aa		11.12	□□□□□ -0.63
RNF10-222	ENST00000544805	U2SURP	O15042	1029 aa	Known RBP	11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	TXNRD1	Q16881	649 aa		11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	LHX8	Q68G74	356 aa		11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	PEAK1	Q9H792	1746 aa		11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	ANKRD26	Q9UPS8	1709 aa		11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	MAP2	P11137	1827 aa	Known RBP	11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	EP400	Q96L91	3159 aa		11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	RGPD2	P0DJD1	1756 aa		11.11	□□□□□ -0.63
RNF10-222	ENST00000544805	MEGF6	O75095	1541 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	TNS1	Q9HBL0	1735 aa	Known RBP	11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	DIAPH1	O60610	1272 aa	Known RBP	11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	SEMA3F	Q13275	785 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	C1orf141	Q5JVX7	400 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	SULT6B1	Q6IMI4	303 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	MPRIP	Q6WCQ1	1025 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	ARMCX6	Q7L4S7	300 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	OTUD5	Q96G74	571 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	JADE2	Q9NQC1	790 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	IGSF5	Q9NSI5	407 aa		11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	RBM28	Q9NW13	759 aa	Known RBP	11.1	□□□□□ -0.63
RNF10-222	ENST00000544805	PER1	O15534	1290 aa	Predicted RBP	11.09	□□□□□ -0.63
RNF10-222	ENST00000544805	IFNL2	Q8IZJ0	200 aa		11.09	□□□□□ -0.63
RNF10-222	ENST00000544805	SLC24A3	Q9HC58	644 aa		11.09	□□□□□ -0.63
RNF10-222	ENST00000544805	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.09	□□□□□ -0.63
RNF10-222	ENST00000544805	BCL9	O00512	1426 aa		11.09	□□□□□ -0.63
RNF10-222	ENST00000544805	TBC1D12	O60347	775 aa		11.08	□□□□□ -0.64
RNF10-222	ENST00000544805	MTA1	Q13330	715 aa		11.08	□□□□□ -0.64
RNF10-222	ENST00000544805	CSPP1	Q1MSJ5	1256 aa		11.08	□□□□□ -0.64
RNF10-222	ENST00000544805	AMOT	Q4VCS5	1084 aa		11.08	□□□□□ -0.64
RNF10-222	ENST00000544805	ANKRD23	Q86SG2	305 aa		11.08	□□□□□ -0.64
RNF10-222	ENST00000544805	MICAL1	Q8TDZ2	1067 aa		11.08	□□□□□ -0.64
RNF10-222	ENST00000544805	TMOD3	Q9NYL9	352 aa		11.08	□□□□□ -0.64
RNF10-222	ENST00000544805	HSP90AB1	P08238	724 aa	Known RBP	11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	HMOX1	P09601	288 aa		11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	HOXB3	P14651	431 aa	Predicted RBP	11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	HMGB2	P26583	209 aa	Known RBP	11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	MLLT3	P42568	568 aa	Predicted RBP	11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	FOXD4	Q12950	439 aa	Predicted RBP	11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	ZNF280D	Q6N043	979 aa		11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	HELB	Q8NG08	1087 aa	Predicted RBP	11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	NUDC	Q9Y266	331 aa		11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	RPS6KL1	Q9Y6S9	549 aa		11.07	□□□□□ -0.64
RNF10-222	ENST00000544805	KAT6B	Q8WYB5	2073 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	CYP27B1	O15528	508 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	POLD1	P28340	1107 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	MAP2K1	Q02750	393 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	DDX10	Q13206	875 aa	Known RBP	11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	SLC27A3	Q5K4L6	730 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	DRC1	Q96MC2	740 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	MAP7D2	Q96T17	732 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	CEP126	Q9P2H0	1117 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	CCNL1	Q9UK58	526 aa	Predicted RBP	11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	FRMD4B	Q9Y2L6	1034 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	PCDHGA4	Q9Y5G9	962 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	IGSF1	Q8N6C5	1336 aa		11.06	□□□□□ -0.64
RNF10-222	ENST00000544805	NHS	Q6T4R5	1651 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	SBF2	Q86WG5	1849 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	EVI5	O60447	810 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	PHKG2	P15735	406 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	SSFA2	P28290	1259 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	IL13	P35225	146 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	CABP4	P57796	275 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	DOK7	Q18PE1	504 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	CCDC181	Q5TID7	509 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	SMC5	Q8IY18	1101 aa		11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	SMARCC1	Q92922	1105 aa	Predicted RBP	11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.05	□□□□□ -0.64
RNF10-222	ENST00000544805	NPC1L1	Q9UHC9	1359 aa		11.04	□□□□□ -0.64
RNF10-222	ENST00000544805	KCNQ4	P56696	695 aa		11.04	□□□□□ -0.64
RNF10-222	ENST00000544805	SLC15A2	Q16348	729 aa		11.04	□□□□□ -0.64
RNF10-222	ENST00000544805	ZFYVE27	Q5T4F4	411 aa		11.04	□□□□□ -0.64
RNF10-222	ENST00000544805	SMYD5	Q6GMV2	418 aa		11.04	□□□□□ -0.64
RNF10-222	ENST00000544805	SPON1	Q9HCB6	807 aa		11.04	□□□□□ -0.64
RNF10-222	ENST00000544805	TFCP2L1	Q9NZI6	479 aa		11.04	□□□□□ -0.64
RNF10-222	ENST00000544805	GOLGA6L3	A6NEY3	463 aa		11.03	□□□□□ -0.64
RNF10-222	ENST00000544805	PPFIA4	O75335	1185 aa		11.03	□□□□□ -0.64
RNF10-222	ENST00000544805	FLII	Q13045	1269 aa		11.03	□□□□□ -0.64
RNF10-222	ENST00000544805	DDX46	Q7L014	1031 aa	Known RBP	11.03	□□□□□ -0.64

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