RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	CFHR5	Q9BXR6	569 aa		7.68	□□□□□ -1.18
RAP1B-231	ENST00000544639	NUCKS1	Q9H1E3	243 aa	Known RBP	7.68	□□□□□ -1.18
RAP1B-231	ENST00000544639	PHF20L1	A8MW92	1017 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	MPST	P25325	297 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	ECM1	Q16610	540 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	EFHC2	Q5JST6	749 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	LRRC69	Q6ZNQ3	347 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	GLYCTK	Q8IVS8	523 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	ETFBKMT	Q8IXQ9	262 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	ABTB2	Q8N961	1025 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	ACD	Q96AP0	544 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	IFT43	Q96FT9	208 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	GZF1	Q9H116	711 aa	Predicted RBP	7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	ANKIB1	Q9P2G1	1089 aa		7.67	□□□□□ -1.18
RAP1B-231	ENST00000544639	UBAP2L	Q14157	1087 aa	Known RBP	7.66	□□□□□ -1.18
RAP1B-231	ENST00000544639	SAMD5	Q5TGI4	173 aa		7.66	□□□□□ -1.18
RAP1B-231	ENST00000544639	BEND7	Q8N7W2	519 aa	Predicted RBP	7.66	□□□□□ -1.18
RAP1B-231	ENST00000544639	NEUROD4	Q9HD90	331 aa		7.66	□□□□□ -1.18
RAP1B-231	ENST00000544639	DMGDH	Q9UI17	866 aa	Known RBP	7.66	□□□□□ -1.18
RAP1B-231	ENST00000544639	GJA3	Q9Y6H8	435 aa		7.66	□□□□□ -1.18
RAP1B-231	ENST00000544639	FAM13A	O94988	1023 aa		7.65	□□□□□ -1.18
RAP1B-231	ENST00000544639	MAP2K3	P46734	347 aa		7.65	□□□□□ -1.18
RAP1B-231	ENST00000544639	ZBTB39	O15060	712 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	EIF1AX	P47813	144 aa	Known RBP	7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	ARHGAP4	P98171	946 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	TYRO3	Q06418	890 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	NOM1	Q5C9Z4	860 aa	Known RBP	7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	GPAT2	Q6NUI2	795 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	FIGNL1	Q6PIW4	674 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	PODN	Q7Z5L7	613 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	BTLA	Q7Z6A9	289 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	TREML1	Q86YW5	311 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	NEDD1	Q8NHV4	660 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	PHF24	Q9UPV7	400 aa		7.64	□□□□□ -1.19
RAP1B-231	ENST00000544639	OIP5	O43482	229 aa		7.63	□□□□□ -1.19
RAP1B-231	ENST00000544639	MICAL2	O94851	1124 aa		7.63	□□□□□ -1.19
RAP1B-231	ENST00000544639	FAM157B	P0CG42	384 aa		7.63	□□□□□ -1.19
RAP1B-231	ENST00000544639	ZAP70	P43403	619 aa		7.63	□□□□□ -1.19
RAP1B-231	ENST00000544639	IDH3A	P50213	366 aa		7.63	□□□□□ -1.19
RAP1B-231	ENST00000544639	CNTNAP5	Q8WYK1	1306 aa		7.62	□□□□□ -1.19
RAP1B-231	ENST00000544639	ATXN7	O15265	892 aa	Predicted RBP	7.62	□□□□□ -1.19
RAP1B-231	ENST00000544639	ALKBH2	Q6NS38	261 aa		7.62	□□□□□ -1.19
RAP1B-231	ENST00000544639	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.62	□□□□□ -1.19
RAP1B-231	ENST00000544639	NDFIP2	Q9NV92	336 aa		7.62	□□□□□ -1.19
RAP1B-231	ENST00000544639	BIN2	Q9UBW5	565 aa	Predicted RBP	7.62	□□□□□ -1.19
RAP1B-231	ENST00000544639	PCDHGC4	Q9Y5F7	938 aa		7.62	□□□□□ -1.19
RAP1B-231	ENST00000544639	EFS	O43281	561 aa		7.61	□□□□□ -1.19
RAP1B-231	ENST00000544639	INPP5B	P32019	993 aa		7.61	□□□□□ -1.19
RAP1B-231	ENST00000544639	ATCAY	Q86WG3	371 aa		7.61	□□□□□ -1.19
RAP1B-231	ENST00000544639	DCAF5	Q96JK2	942 aa		7.61	□□□□□ -1.19
RAP1B-231	ENST00000544639	CEP63	Q96MT8	703 aa		7.61	□□□□□ -1.19
RAP1B-231	ENST00000544639	OPLAH	O14841	1288 aa		7.6	□□□□□ -1.19
RAP1B-231	ENST00000544639	BNIP3L	O60238	219 aa		7.6	□□□□□ -1.19
RAP1B-231	ENST00000544639	FZD6	O60353	706 aa		7.6	□□□□□ -1.19
RAP1B-231	ENST00000544639	ARSD	P51689	593 aa		7.6	□□□□□ -1.19
RAP1B-231	ENST00000544639	GDF2	Q9UK05	429 aa	Predicted RBP	7.6	□□□□□ -1.19
RAP1B-231	ENST00000544639	DCDC2B	A2VCK2	349 aa		7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	GRN	P28799	593 aa	Known RBP	7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	TNP2	Q05952	138 aa		7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	TMCO4	Q5TGY1	634 aa		7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	ABHD17A	Q96GS6	310 aa		7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	BRD7	Q9NPI1	651 aa		7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	FAM13B	Q9NYF5	915 aa		7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	HCN2	Q9UL51	889 aa		7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.59	□□□□□ -1.19
RAP1B-231	ENST00000544639	KHNYN	O15037	678 aa	Known RBP	7.58	□□□□□ -1.2
RAP1B-231	ENST00000544639	MAPT	P10636	758 aa	Known RBP	7.58	□□□□□ -1.2
RAP1B-231	ENST00000544639	KCNQ4	P56696	695 aa		7.58	□□□□□ -1.2
RAP1B-231	ENST00000544639	PLA2G4E	Q3MJ16	856 aa		7.58	□□□□□ -1.2
RAP1B-231	ENST00000544639	CCDC87	Q9NVE4	849 aa		7.58	□□□□□ -1.2
RAP1B-231	ENST00000544639	EPB42	P16452	691 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	MZF1	P28698	734 aa	Predicted RBP	7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	AAMP	Q13685	434 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	LAMC2	Q13753	1193 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	ALYREF	Q86V81	257 aa	Known RBP	7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	RGL4	Q8IZJ4	473 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	GOLGA6L1	Q8N7Z2	621 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	GPR152	Q8TDT2	470 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	EDEM1	Q92611	657 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	STRN4	Q9NRL3	753 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	DCTN4	Q9UJW0	460 aa		7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	RTCB	Q9Y3I0	505 aa	Known RBP	7.57	□□□□□ -1.2
RAP1B-231	ENST00000544639	MSTN	O14793	375 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	NDUFB5	O43674	189 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	PDGFA	P04085	211 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	DNM1	Q05193	864 aa	Known RBP	7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	SFSWAP	Q12872	951 aa	Known RBP	7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	CCDC27	Q2M243	656 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	GALNT6	Q8NCL4	622 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	PIK3R5	Q8WYR1	880 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	BRPF3	Q9ULD4	1205 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	POLI	Q9UNA4	740 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	KCNH4	Q9UQ05	1017 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	USP20	Q9Y2K6	914 aa		7.56	□□□□□ -1.2
RAP1B-231	ENST00000544639	SHISA8	B8ZZ34	492 aa		7.55	□□□□□ -1.2
RAP1B-231	ENST00000544639	FGFR3	P22607	806 aa		7.55	□□□□□ -1.2
RAP1B-231	ENST00000544639	MAPK1	P28482	360 aa		7.55	□□□□□ -1.2
RAP1B-231	ENST00000544639	TRIP4	Q15650	581 aa	Predicted RBP	7.55	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms