RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 DBNDD2Q9BQY9 259 aa17.61■□□□□ 0.41
RDX-218ENST00000544551 LARGE1O95461 756 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 IFIT1P09914 478 aaKnown RBP17.6■□□□□ 0.41
RDX-218ENST00000544551 UBE2HP62256 183 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 TSC1Q92574 1164 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 ZNF594Q96JF6 807 aaPredicted RBP17.6■□□□□ 0.41
RDX-218ENST00000544551 CNNM1Q9NRU3 951 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 DACT1Q9NYF0 836 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 FRMPD1Q5SYB0 1578 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 IDH1O75874 414 aaKnown RBP17.6■□□□□ 0.41
RDX-218ENST00000544551 ISM2Q6H9L7 571 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 PIK3C2BO00750 1634 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 IFNL2Q8IZJ0 200 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 RAD50Q92878 1312 aa17.6■□□□□ 0.41
RDX-218ENST00000544551 CPSF1Q10570 1443 aaKnown RBP17.59■□□□□ 0.41
RDX-218ENST00000544551 SIRT1Q96EB6 747 aa17.59■□□□□ 0.41
RDX-218ENST00000544551 ARHGEF10O15013 1369 aa17.59■□□□□ 0.41
RDX-218ENST00000544551 NLRP1Q9C000 1473 aa17.59■□□□□ 0.41
RDX-218ENST00000544551 KINO60870 393 aaKnown RBP17.59■□□□□ 0.41
RDX-218ENST00000544551 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
RDX-218ENST00000544551 MYO3AQ8NEV4 1616 aa17.59■□□□□ 0.41
RDX-218ENST00000544551 ANKRD1Q15327 319 aa17.59■□□□□ 0.41
RDX-218ENST00000544551 NEK1Q96PY6 1258 aa17.59■□□□□ 0.41
RDX-218ENST00000544551 DDX21Q9NR30 783 aaKnown RBP eCLIP17.59■□□□□ 0.41
RDX-218ENST00000544551 A0A0D9SFI3 127 aa17.58■□□□□ 0.41
RDX-218ENST00000544551 TULP1O00294 542 aaPredicted RBP17.58■□□□□ 0.41
RDX-218ENST00000544551 POLR3DP05423 398 aaPredicted RBP17.58■□□□□ 0.41
RDX-218ENST00000544551 ZNF445P59923 1031 aa17.58■□□□□ 0.41
RDX-218ENST00000544551 SH2B1Q9NRF2 756 aaPredicted RBP17.58■□□□□ 0.41
RDX-218ENST00000544551 CCDC171Q6TFL3 1326 aa17.58■□□□□ 0.41
RDX-218ENST00000544551 SNRPA1P09661 255 aaKnown RBP17.58■□□□□ 0.4
RDX-218ENST00000544551 HSPA2P54652 639 aa17.58■□□□□ 0.4
RDX-218ENST00000544551 SLFNL1Q499Z3 407 aa17.58■□□□□ 0.4
RDX-218ENST00000544551 CCDC144CPQ8IYA2 1237 aa17.58■□□□□ 0.4
RDX-218ENST00000544551 INTS4Q96HW7 963 aaKnown RBP17.58■□□□□ 0.4
RDX-218ENST00000544551 MTMR7Q9Y216 660 aa17.58■□□□□ 0.4
RDX-218ENST00000544551 DIP2CQ9Y2E4 1556 aa17.58■□□□□ 0.4
RDX-218ENST00000544551 ME3Q16798 604 aa17.58■□□□□ 0.4
RDX-218ENST00000544551 OSBPL3Q9H4L5 887 aa17.58■□□□□ 0.4
RDX-218ENST00000544551 ALDH1L1O75891 902 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 A1BGP04217 495 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 TPM2P07951 284 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 Q6ZUG5 572 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 JAK2O60674 1132 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 STK38Q15208 465 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 CCDC158Q5M9N0 1113 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 BIN1O00499 593 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 ERCC4Q92889 916 aaPredicted RBP17.57■□□□□ 0.4
RDX-218ENST00000544551 ZKSCAN5Q9Y2L8 839 aa17.57■□□□□ 0.4
RDX-218ENST00000544551 CHGBP05060 677 aa17.56■□□□□ 0.4
RDX-218ENST00000544551 AXIN2Q9Y2T1 843 aa17.56■□□□□ 0.4
RDX-218ENST00000544551 AK9Q5TCS8 1911 aa17.56■□□□□ 0.4
RDX-218ENST00000544551 LETM1O95202 739 aaPredicted RBP17.56■□□□□ 0.4
RDX-218ENST00000544551 NCOA5Q9HCD5 579 aaKnown RBP17.56■□□□□ 0.4
RDX-218ENST00000544551 CDC37L1Q7L3B6 337 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 LUZP1Q86V48 1076 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
RDX-218ENST00000544551 KIAA1210Q9ULL0 1709 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 PRDM10Q9NQV6 1147 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 DEPDC5O75140 1603 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 SLC27A2O14975 620 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 NRDCO43847 1150 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 APOBRQ0VD83 1088 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 TPD52L1Q16890 204 aaPredicted RBP17.55■□□□□ 0.4
RDX-218ENST00000544551 KIF24Q5T7B8 1368 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 MED14O60244 1454 aa17.55■□□□□ 0.4
RDX-218ENST00000544551 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
RDX-218ENST00000544551 PI4K2BQ8TCG2 481 aa17.54■□□□□ 0.4
RDX-218ENST00000544551 LSG1Q9H089 658 aaKnown RBP17.54■□□□□ 0.4
RDX-218ENST00000544551 STAP2Q9UGK3 403 aa17.54■□□□□ 0.4
RDX-218ENST00000544551 TPCN1Q9ULQ1 816 aa17.54■□□□□ 0.4
RDX-218ENST00000544551 TTC41PQ6P2S7 1318 aa17.54■□□□□ 0.4
RDX-218ENST00000544551 SMC2O95347 1197 aa17.53■□□□□ 0.4
RDX-218ENST00000544551 OTUD7BQ6GQQ9 843 aa17.53■□□□□ 0.4
RDX-218ENST00000544551 METTL24Q5JXM2 366 aa17.53■□□□□ 0.4
RDX-218ENST00000544551 C16orf45Q96MC5 204 aaPredicted RBP17.53■□□□□ 0.4
RDX-218ENST00000544551 ATP10DQ9P241 1426 aa17.53■□□□□ 0.4
RDX-218ENST00000544551 ZC3H13Q5T200 1668 aaKnown RBP17.53■□□□□ 0.4
RDX-218ENST00000544551 GCKRQ14397 625 aa17.53■□□□□ 0.4
RDX-218ENST00000544551 HELBQ8NG08 1087 aaPredicted RBP17.53■□□□□ 0.4
RDX-218ENST00000544551 DNAJC25Q9H1X3 360 aa17.53■□□□□ 0.4
RDX-218ENST00000544551 A0A087WWV3 80 aa17.52■□□□□ 0.4
RDX-218ENST00000544551 ZNF165P49910 485 aa17.52■□□□□ 0.4
RDX-218ENST00000544551 PIBF1Q8WXW3 757 aa17.52■□□□□ 0.4
RDX-218ENST00000544551 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.4
RDX-218ENST00000544551 RXRAP19793 462 aa17.52■□□□□ 0.4
RDX-218ENST00000544551 KRT32Q14532 448 aa17.52■□□□□ 0.4
RDX-218ENST00000544551 ANO6Q4KMQ2 910 aa17.52■□□□□ 0.4
RDX-218ENST00000544551 TRMT1Q9NXH9 659 aaKnown RBP17.52■□□□□ 0.4
RDX-218ENST00000544551 ZNF589Q86UQ0 364 aaPredicted RBP17.52■□□□□ 0.39
RDX-218ENST00000544551 SCAND2PQ9GZW5 306 aaPredicted RBP17.52■□□□□ 0.39
RDX-218ENST00000544551 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
RDX-218ENST00000544551 VPS53Q5VIR6 699 aa17.51■□□□□ 0.39
RDX-218ENST00000544551 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
RDX-218ENST00000544551 FAM89AQ96GI7 184 aa17.51■□□□□ 0.39
RDX-218ENST00000544551 SASH1O94885 1247 aa17.51■□□□□ 0.39
RDX-218ENST00000544551 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
RDX-218ENST00000544551 KIF6Q6ZMV9 814 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms