RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 TOGARAM1Q9Y4F4 1720 aa12.8□□□□□ -0.36
MDH1-216ENST00000544381 EVI5O60447 810 aa12.8□□□□□ -0.36
MDH1-216ENST00000544381 YBX3P16989 372 aaKnown RBP eCLIP12.8□□□□□ -0.369e-10■□□□□ 10.5
MDH1-216ENST00000544381 BRPF1P55201 1214 aaPredicted RBP12.8□□□□□ -0.36
MDH1-216ENST00000544381 ANKRD13DQ6ZTN6 518 aa12.8□□□□□ -0.36
MDH1-216ENST00000544381 IFNL2Q8IZJ0 200 aa12.8□□□□□ -0.36
MDH1-216ENST00000544381 NOB1Q9ULX3 412 aaKnown RBP12.8□□□□□ -0.36
MDH1-216ENST00000544381 VIRMAQ69YN4 1812 aaKnown RBP12.79□□□□□ -0.36
MDH1-216ENST00000544381 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
MDH1-216ENST00000544381 PHKG2P15735 406 aa12.79□□□□□ -0.36
MDH1-216ENST00000544381 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.36
MDH1-216ENST00000544381 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
MDH1-216ENST00000544381 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
MDH1-216ENST00000544381 C5P01031 1676 aa12.78□□□□□ -0.36
MDH1-216ENST00000544381 PKD1L3Q7Z443 1732 aa12.78□□□□□ -0.36
MDH1-216ENST00000544381 BTBD11A6QL63 1104 aa12.78□□□□□ -0.36
MDH1-216ENST00000544381 KRT24Q2M2I5 525 aa12.78□□□□□ -0.36
MDH1-216ENST00000544381 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
MDH1-216ENST00000544381 ATF7IPQ6VMQ6 1270 aa12.78□□□□□ -0.36
MDH1-216ENST00000544381 DZIP1LQ8IYY4 767 aaKnown RBP12.78□□□□□ -0.36
MDH1-216ENST00000544381 MRPL50Q8N5N7 158 aaKnown RBP12.78□□□□□ -0.36
MDH1-216ENST00000544381 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
MDH1-216ENST00000544381 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
MDH1-216ENST00000544381 TCERG1O14776 1098 aaKnown RBP12.77□□□□□ -0.37
MDH1-216ENST00000544381 GPR162Q16538 588 aa12.77□□□□□ -0.37
MDH1-216ENST00000544381 SLC27A3Q5K4L6 730 aa12.77□□□□□ -0.37
MDH1-216ENST00000544381 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
MDH1-216ENST00000544381 COG6Q9Y2V7 657 aa12.77□□□□□ -0.37
MDH1-216ENST00000544381 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
MDH1-216ENST00000544381 ARHGAP33O14559 1287 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 ADCY9O60503 1353 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 GIGYF1O75420 1035 aaPredicted RBP12.76□□□□□ -0.37
MDH1-216ENST00000544381 TRIM27P14373 513 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 CAMK2BQ13554 666 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 ARHGAP45Q92619 1136 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 PCDH11XQ9BZA7 1347 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 PCDH11YQ9BZA8 1340 aa12.76□□□□□ -0.37
MDH1-216ENST00000544381 SCN11AQ9UI33 1791 aa12.75□□□□□ -0.37
MDH1-216ENST00000544381 CYP27B1O15528 508 aa12.75□□□□□ -0.37
MDH1-216ENST00000544381 RLBP1P12271 317 aa12.75□□□□□ -0.37
MDH1-216ENST00000544381 AAMPQ13685 434 aa12.75□□□□□ -0.37
MDH1-216ENST00000544381 ZNF454Q8N9F8 522 aa12.75□□□□□ -0.37
MDH1-216ENST00000544381 CHMP4AQ9BY43 222 aa12.75□□□□□ -0.37
MDH1-216ENST00000544381 ADAMTS7Q9UKP4 1686 aa12.75□□□□□ -0.37
MDH1-216ENST00000544381 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
MDH1-216ENST00000544381 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
MDH1-216ENST00000544381 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
MDH1-216ENST00000544381 DDX54Q8TDD1 881 aaKnown RBP12.74□□□□□ -0.37
MDH1-216ENST00000544381 STK31Q9BXU1 1019 aa12.74□□□□□ -0.37
MDH1-216ENST00000544381 API5Q9BZZ5 524 aaKnown RBP12.74□□□□□ -0.37
MDH1-216ENST00000544381 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
MDH1-216ENST00000544381 TNNQ9UQP3 1299 aa12.74□□□□□ -0.37
MDH1-216ENST00000544381 UBR3Q6ZT12 1888 aa12.74□□□□□ -0.37
MDH1-216ENST00000544381 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
MDH1-216ENST00000544381 KDM6AO15550 1401 aaPredicted RBP12.73□□□□□ -0.37
MDH1-216ENST00000544381 ITGB4P16144 1822 aa12.73□□□□□ -0.37
MDH1-216ENST00000544381 SIPA1L3O60292 1781 aaPredicted RBP12.73□□□□□ -0.37
MDH1-216ENST00000544381 EIF4A1P60842 406 aaKnown RBP12.73□□□□□ -0.37
MDH1-216ENST00000544381 MVPQ14764 893 aaKnown RBP12.73□□□□□ -0.37
MDH1-216ENST00000544381 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
MDH1-216ENST00000544381 HOXB7P09629 217 aa12.72□□□□□ -0.37
MDH1-216ENST00000544381 POLD1P28340 1107 aa12.72□□□□□ -0.37
MDH1-216ENST00000544381 FOSBP53539 338 aa12.72□□□□□ -0.37
MDH1-216ENST00000544381 CABP4P57796 275 aa12.72□□□□□ -0.37
MDH1-216ENST00000544381 AMIGO3Q86WK7 504 aa12.72□□□□□ -0.37
MDH1-216ENST00000544381 ITPRIPQ8IWB1 547 aa12.72□□□□□ -0.37
MDH1-216ENST00000544381 TFCP2L1Q9NZI6 479 aa12.72□□□□□ -0.37
MDH1-216ENST00000544381 DDX19BQ9UMR2 479 aa12.72□□□□□ -0.37
MDH1-216ENST00000544381 KCNQ3O43525 872 aa12.71□□□□□ -0.37
MDH1-216ENST00000544381 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
MDH1-216ENST00000544381 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
MDH1-216ENST00000544381 CHMP4BQ9H444 224 aaKnown RBP12.71□□□□□ -0.37
MDH1-216ENST00000544381 WDR70Q9NW82 654 aa12.71□□□□□ -0.37
MDH1-216ENST00000544381 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
MDH1-216ENST00000544381 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.37
MDH1-216ENST00000544381 PTPRCP08575 1304 aa12.7□□□□□ -0.38
MDH1-216ENST00000544381 CACNA1FO60840 1977 aa12.7□□□□□ -0.38
MDH1-216ENST00000544381 PSEN2P49810 448 aa12.7□□□□□ -0.38
MDH1-216ENST00000544381 HDGFL1Q5TGJ6 251 aa12.7□□□□□ -0.38
MDH1-216ENST00000544381 MSL1Q68DK7 614 aa12.7□□□□□ -0.38
MDH1-216ENST00000544381 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
MDH1-216ENST00000544381 DPYSL4O14531 572 aa12.69□□□□□ -0.38
MDH1-216ENST00000544381 EIF2S2P20042 333 aaKnown RBP12.69□□□□□ -0.38
MDH1-216ENST00000544381 ZNF790Q6PG37 636 aa12.69□□□□□ -0.38
MDH1-216ENST00000544381 TTC5Q8N0Z6 440 aa12.69□□□□□ -0.38
MDH1-216ENST00000544381 NECTIN2Q92692 538 aa12.69□□□□□ -0.38
MDH1-216ENST00000544381 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
MDH1-216ENST00000544381 MRC1P22897 1456 aa12.68□□□□□ -0.38
MDH1-216ENST00000544381 CICQ96RK0 1608 aaPredicted RBP12.68□□□□□ -0.38
MDH1-216ENST00000544381 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
MDH1-216ENST00000544381 ABCC4O15439 1325 aa12.68□□□□□ -0.38
MDH1-216ENST00000544381 SLC39A6Q13433 755 aa12.67□□□□□ -0.38
MDH1-216ENST00000544381 CENPQQ7L2Z9 268 aaPredicted RBP12.67□□□□□ -0.38
MDH1-216ENST00000544381 KCNK17Q96T54 332 aa12.67□□□□□ -0.38
MDH1-216ENST00000544381 KIF13BQ9NQT8 1826 aa12.67□□□□□ -0.38
MDH1-216ENST00000544381 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
MDH1-216ENST00000544381 GRIN3BO60391 1043 aa12.65□□□□□ -0.38
MDH1-216ENST00000544381 FLIIQ13045 1269 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms