RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 TGFB2P61812 414 aa19.26■□□□□ 0.67
CD9-210ENST00000543916 TRIM28Q13263 835 aaKnown RBP19.26■□□□□ 0.67
CD9-210ENST00000543916 ERFEQ4G0M1 354 aa19.26■□□□□ 0.67
CD9-210ENST00000543916 DNAAF4Q8WXU2 420 aa19.26■□□□□ 0.67
CD9-210ENST00000543916 BRIP1Q9BX63 1249 aa19.26■□□□□ 0.67
CD9-210ENST00000543916 CACNA1SQ13698 1873 aa19.25■□□□□ 0.67
CD9-210ENST00000543916 A0A0G2JLW4 131 aa19.25■□□□□ 0.67
CD9-210ENST00000543916 IGKV5-2P06315 115 aa19.25■□□□□ 0.67
CD9-210ENST00000543916 DPEP1P16444 411 aa19.25■□□□□ 0.67
CD9-210ENST00000543916 CHRNA5P30532 468 aa19.25■□□□□ 0.67
CD9-210ENST00000543916 UTP14AQ9BVJ6 771 aaKnown RBP19.25■□□□□ 0.67
CD9-210ENST00000543916 RIC1Q4ADV7 1423 aa19.25■□□□□ 0.67
CD9-210ENST00000543916 KCNA3P22001 575 aa19.24■□□□□ 0.67
CD9-210ENST00000543916 GTF2E1P29083 439 aaPredicted RBP19.24■□□□□ 0.67
CD9-210ENST00000543916 SYNE4Q8N205 404 aa19.24■□□□□ 0.67
CD9-210ENST00000543916 BRPF1P55201 1214 aaPredicted RBP19.23■□□□□ 0.67
CD9-210ENST00000543916 NEXNQ0ZGT2 675 aa19.23■□□□□ 0.67
CD9-210ENST00000543916 CWF19L2Q2TBE0 894 aaKnown RBP19.23■□□□□ 0.67
CD9-210ENST00000543916 TRMT112Q9UI30 125 aaKnown RBP19.23■□□□□ 0.67
CD9-210ENST00000543916 PTPRCP08575 1304 aa19.23■□□□□ 0.67
CD9-210ENST00000543916 RNF123Q5XPI4 1314 aa19.23■□□□□ 0.67
CD9-210ENST00000543916 PDE6BP35913 854 aa19.22■□□□□ 0.67
CD9-210ENST00000543916 C2CD5Q86YS7 1000 aa19.22■□□□□ 0.67
CD9-210ENST00000543916 CCDC191Q8NCU4 936 aa19.22■□□□□ 0.67
CD9-210ENST00000543916 WWC3Q9ULE0 1092 aa19.22■□□□□ 0.67
CD9-210ENST00000543916 SH3TC1Q8TE82 1336 aa19.22■□□□□ 0.67
CD9-210ENST00000543916 NEURL1BA8MQ27 555 aa19.21■□□□□ 0.67
CD9-210ENST00000543916 BCAR3O75815 825 aa19.21■□□□□ 0.67
CD9-210ENST00000543916 FAM89AQ96GI7 184 aa19.21■□□□□ 0.67
CD9-210ENST00000543916 CWC25Q9NXE8 425 aaPredicted RBP19.21■□□□□ 0.67
CD9-210ENST00000543916 NOB1Q9ULX3 412 aaKnown RBP19.21■□□□□ 0.67
CD9-210ENST00000543916 ARFGEF1Q9Y6D6 1849 aa19.21■□□□□ 0.67
CD9-210ENST00000543916 KLRG2A4D1S0 409 aaPredicted RBP19.2■□□□□ 0.66
CD9-210ENST00000543916 RTL5Q5HYW3 569 aaPredicted RBP19.2■□□□□ 0.66
CD9-210ENST00000543916 BEND3Q5T5X7 828 aa19.2■□□□□ 0.66
CD9-210ENST00000543916 C3orf67Q6ZVT6 689 aa19.2■□□□□ 0.66
CD9-210ENST00000543916 LINS1Q8NG48 757 aa19.2■□□□□ 0.66
CD9-210ENST00000543916 H0YIN7 160 aa19.19■□□□□ 0.66
CD9-210ENST00000543916 HCLS1P14317 486 aaPredicted RBP19.19■□□□□ 0.66
CD9-210ENST00000543916 SLC10A5Q5PT55 438 aa19.19■□□□□ 0.66
CD9-210ENST00000543916 SLC4A10Q6U841 1118 aa19.19■□□□□ 0.66
CD9-210ENST00000543916 JARID2Q92833 1246 aaPredicted RBP19.19■□□□□ 0.66
CD9-210ENST00000543916 KIF16BQ96L93 1317 aa19.19■□□□□ 0.66
CD9-210ENST00000543916 PCCAP05165 728 aaPredicted RBP19.18■□□□□ 0.66
CD9-210ENST00000543916 SRGNP10124 158 aa19.18■□□□□ 0.66
CD9-210ENST00000543916 YBX3P16989 372 aaKnown RBP eCLIP19.18■□□□□ 0.66
CD9-210ENST00000543916 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
CD9-210ENST00000543916 ZBTB38Q8NAP3 1195 aaPredicted RBP19.18■□□□□ 0.66
CD9-210ENST00000543916 PDZRN3Q9UPQ7 1066 aa19.18■□□□□ 0.66
CD9-210ENST00000543916 GCKRQ14397 625 aa19.17■□□□□ 0.66
CD9-210ENST00000543916 CRY2Q49AN0 593 aa19.17■□□□□ 0.66
CD9-210ENST00000543916 PIM2Q9P1W9 311 aa19.17■□□□□ 0.66
CD9-210ENST00000543916 MYH3P11055 1940 aa19.17■□□□□ 0.66
CD9-210ENST00000543916 SLX4Q8IY92 1834 aa19.16■□□□□ 0.66
CD9-210ENST00000543916 IRS4O14654 1257 aaPredicted RBP19.15■□□□□ 0.66
CD9-210ENST00000543916 NPR1P16066 1061 aa19.15■□□□□ 0.66
CD9-210ENST00000543916 GPR162Q16538 588 aa19.15■□□□□ 0.66
CD9-210ENST00000543916 STYK1Q6J9G0 422 aa19.15■□□□□ 0.66
CD9-210ENST00000543916 FRAT1Q92837 279 aaPredicted RBP19.15■□□□□ 0.66
CD9-210ENST00000543916 ZNF622Q969S3 477 aaKnown RBP eCLIP19.15■□□□□ 0.66
CD9-210ENST00000543916 MASTLQ96GX5 879 aa19.15■□□□□ 0.66
CD9-210ENST00000543916 NLRP3Q96P20 1036 aa19.15■□□□□ 0.66
CD9-210ENST00000543916 SRCIN1Q9C0H9 1055 aa19.15■□□□□ 0.66
CD9-210ENST00000543916 CDHR2Q9BYE9 1310 aa19.15■□□□□ 0.66
CD9-210ENST00000543916 TAF1P21675 1872 aa19.15■□□□□ 0.66
CD9-210ENST00000543916 H7C1W4 665 aa19.14■□□□□ 0.65
CD9-210ENST00000543916 ALDH1L1O75891 902 aa19.14■□□□□ 0.65
CD9-210ENST00000543916 UBE3BQ7Z3V4 1068 aa19.14■□□□□ 0.65
CD9-210ENST00000543916 ARHGAP45Q92619 1136 aa19.14■□□□□ 0.65
CD9-210ENST00000543916 API5Q9BZZ5 524 aaKnown RBP19.14■□□□□ 0.65
CD9-210ENST00000543916 TNNQ9UQP3 1299 aa19.14■□□□□ 0.65
CD9-210ENST00000543916 BCS1LQ9Y276 419 aa19.14■□□□□ 0.65
CD9-210ENST00000543916 COL4A1P02462 1669 aa19.14■□□□□ 0.65
CD9-210ENST00000543916 GOLGB1Q14789 3259 aaKnown RBP19.13■□□□□ 0.65
CD9-210ENST00000543916 CASP7P55210 303 aa19.13■□□□□ 0.65
CD9-210ENST00000543916 DALRD3Q5D0E6 543 aaKnown RBP19.13■□□□□ 0.65
CD9-210ENST00000543916 TTLL6Q8N841 843 aa19.13■□□□□ 0.65
CD9-210ENST00000543916 ABCC4O15439 1325 aa19.12■□□□□ 0.65
CD9-210ENST00000543916 TRIM27P14373 513 aa19.12■□□□□ 0.65
CD9-210ENST00000543916 RPGRQ92834 1020 aaKnown RBP19.12■□□□□ 0.65
CD9-210ENST00000543916 RCAN3Q9UKA8 241 aa19.12■□□□□ 0.65
CD9-210ENST00000543916 IPO8O15397 1037 aaKnown RBP19.11■□□□□ 0.65
CD9-210ENST00000543916 HOXA10P31260 410 aaPredicted RBP19.11■□□□□ 0.65
CD9-210ENST00000543916 PRPF40BQ6NWY9 871 aaKnown RBP19.11■□□□□ 0.65
CD9-210ENST00000543916 ATF7IPQ6VMQ6 1270 aa19.11■□□□□ 0.65
CD9-210ENST00000543916 GRM8O00222 908 aa19.1■□□□□ 0.65
CD9-210ENST00000543916 PDE8AO60658 829 aa19.1■□□□□ 0.65
CD9-210ENST00000543916 CNKSR1Q969H4 720 aa19.1■□□□□ 0.65
CD9-210ENST00000543916 DCAF8L1A6NGE4 600 aa19.09■□□□□ 0.65
CD9-210ENST00000543916 CCT4P50991 539 aaKnown RBP19.09■□□□□ 0.65
CD9-210ENST00000543916 SF3B3Q15393 1217 aaKnown RBP19.09■□□□□ 0.65
CD9-210ENST00000543916 ZKSCAN2Q63HK3 967 aa19.09■□□□□ 0.65
CD9-210ENST00000543916 RBM17Q96I25 401 aaKnown RBP19.09■□□□□ 0.65
CD9-210ENST00000543916 SPEF2Q9C093 1822 aa19.09■□□□□ 0.65
CD9-210ENST00000543916 FER1L6Q2WGJ9 1857 aa19.08■□□□□ 0.65
CD9-210ENST00000543916 HSP90B1P14625 803 aaKnown RBP19.08■□□□□ 0.64
CD9-210ENST00000543916 CLUAP1Q96AJ1 413 aa19.08■□□□□ 0.64
CD9-210ENST00000543916 CRAMP1Q96RY5 1269 aa19.08■□□□□ 0.64
CD9-210ENST00000543916 C9orf78Q9NZ63 289 aaPredicted RBP19.08■□□□□ 0.64
CD9-210ENST00000543916 ZNF219Q9P2Y4 722 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms