RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 ALDH1B1P30837 517 aa21.31■■□□□ 1
SPPL3-207ENST00000543608 LAMB2P55268 1798 aa21.31■■□□□ 1
SPPL3-207ENST00000543608 AIMP1Q12904 312 aaKnown RBP21.3■■□□□ 1
SPPL3-207ENST00000543608 XAGE3Q8WTP9 111 aa21.3■■□□□ 1
SPPL3-207ENST00000543608 RPGRQ92834 1020 aaKnown RBP21.3■■□□□ 1
SPPL3-207ENST00000543608 ZNF541Q9H0D2 1346 aa21.29■■□□□ 1
SPPL3-207ENST00000543608 COPS6Q7L5N1 327 aa21.29■■□□□ 1
SPPL3-207ENST00000543608 COL4A5P29400 1685 aa21.28■■□□□ 1
SPPL3-207ENST00000543608 POTEIP0CG38 1075 aa21.28■■□□□ 1
SPPL3-207ENST00000543608 POTEJP0CG39 1038 aa21.28■■□□□ 1
SPPL3-207ENST00000543608 PARP10Q53GL7 1025 aa21.28■■□□□ 1
SPPL3-207ENST00000543608 PPP1R42Q7Z4L9 355 aa21.28■■□□□ 1
SPPL3-207ENST00000543608 RTKN2Q8IZC4 609 aa21.28■■□□□ 1
SPPL3-207ENST00000543608 ZNF428Q96B54 188 aa21.28■■□□□ 1
SPPL3-207ENST00000543608 CHPF2Q9P2E5 772 aa21.28■■□□□ 1
SPPL3-207ENST00000543608 TCERG1O14776 1098 aaKnown RBP21.27■■□□□ 1
SPPL3-207ENST00000543608 SYNE4Q8N205 404 aa21.27■■□□□ 1
SPPL3-207ENST00000543608 HOXA10P31260 410 aaPredicted RBP21.26■□□□□ 0.99
SPPL3-207ENST00000543608 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
SPPL3-207ENST00000543608 UTP14AQ9BVJ6 771 aaKnown RBP21.26■□□□□ 0.99
SPPL3-207ENST00000543608 DDX21Q9NR30 783 aaKnown RBP eCLIP21.26■□□□□ 0.99
SPPL3-207ENST00000543608 SCN4AP35499 1836 aa21.26■□□□□ 0.99
SPPL3-207ENST00000543608 HDGFL1Q5TGJ6 251 aa21.25■□□□□ 0.99
SPPL3-207ENST00000543608 KLRG1Q96E93 195 aa21.25■□□□□ 0.99
SPPL3-207ENST00000543608 APAF1O14727 1248 aa21.24■□□□□ 0.99
SPPL3-207ENST00000543608 PPEF1O14829 653 aaPredicted RBP21.24■□□□□ 0.99
SPPL3-207ENST00000543608 NLRP10Q86W26 655 aa21.24■□□□□ 0.99
SPPL3-207ENST00000543608 RBM17Q96I25 401 aaKnown RBP21.24■□□□□ 0.99
SPPL3-207ENST00000543608 MBIPQ9NS73 344 aa21.24■□□□□ 0.99
SPPL3-207ENST00000543608 CFAP44Q96MT7 982 aa21.23■□□□□ 0.99
SPPL3-207ENST00000543608 CRAMP1Q96RY5 1269 aa21.23■□□□□ 0.99
SPPL3-207ENST00000543608 PSMD1Q99460 953 aa21.23■□□□□ 0.99
SPPL3-207ENST00000543608 TAF1P21675 1872 aa21.22■□□□□ 0.99
SPPL3-207ENST00000543608 DDX60Q8IY21 1712 aaKnown RBP21.22■□□□□ 0.99
SPPL3-207ENST00000543608 HCLS1P14317 486 aaPredicted RBP21.22■□□□□ 0.99
SPPL3-207ENST00000543608 HSP90AB3PQ58FF7 597 aa21.22■□□□□ 0.99
SPPL3-207ENST00000543608 L3MBTL3Q96JM7 780 aaPredicted RBP21.22■□□□□ 0.99
SPPL3-207ENST00000543608 NLRP3Q96P20 1036 aa21.22■□□□□ 0.99
SPPL3-207ENST00000543608 TCIRG1Q13488 830 aa21.21■□□□□ 0.99
SPPL3-207ENST00000543608 DUSP27Q5VZP5 1158 aa21.21■□□□□ 0.99
SPPL3-207ENST00000543608 CHADLQ6NUI6 762 aa21.21■□□□□ 0.99
SPPL3-207ENST00000543608 ABCC4O15439 1325 aa21.21■□□□□ 0.99
SPPL3-207ENST00000543608 IQCA1LA6NCM1 817 aa21.2■□□□□ 0.98
SPPL3-207ENST00000543608 FZD9O00144 591 aa21.2■□□□□ 0.98
SPPL3-207ENST00000543608 HOXB7P09629 217 aa21.2■□□□□ 0.98
SPPL3-207ENST00000543608 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
SPPL3-207ENST00000543608 SLC10A5Q5PT55 438 aa21.2■□□□□ 0.98
SPPL3-207ENST00000543608 CC2D2BQ6DHV5 1058 aa21.2■□□□□ 0.98
SPPL3-207ENST00000543608 TAF1DQ9H5J8 278 aaPredicted RBP21.2■□□□□ 0.98
SPPL3-207ENST00000543608 TRMT112Q9UI30 125 aaKnown RBP21.2■□□□□ 0.98
SPPL3-207ENST00000543608 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
SPPL3-207ENST00000543608 ADAMTSL1Q8N6G6 1762 aa21.19■□□□□ 0.98
SPPL3-207ENST00000543608 LTBP1Q14766 1721 aa21.18■□□□□ 0.98
SPPL3-207ENST00000543608 ZNF853P0CG23 659 aa21.18■□□□□ 0.98
SPPL3-207ENST00000543608 EAPPQ56P03 285 aaPredicted RBP21.18■□□□□ 0.98
SPPL3-207ENST00000543608 JDP2Q8WYK2 163 aa21.18■□□□□ 0.98
SPPL3-207ENST00000543608 DBF4Q9UBU7 674 aaPredicted RBP21.18■□□□□ 0.98
SPPL3-207ENST00000543608 SH3TC1Q8TE82 1336 aa21.18■□□□□ 0.98
SPPL3-207ENST00000543608 LARGE2Q8N3Y3 721 aa21.17■□□□□ 0.98
SPPL3-207ENST00000543608 JMYQ8N9B5 988 aa21.17■□□□□ 0.98
SPPL3-207ENST00000543608 PLBD2Q8NHP8 589 aa21.17■□□□□ 0.98
SPPL3-207ENST00000543608 HACL1Q9UJ83 578 aa21.17■□□□□ 0.98
SPPL3-207ENST00000543608 ATP5J2-PTCD1G3V325 749 aa21.16■□□□□ 0.98
SPPL3-207ENST00000543608 ELL2O00472 640 aaPredicted RBP21.16■□□□□ 0.98
SPPL3-207ENST00000543608 ANKRD13DQ6ZTN6 518 aa21.16■□□□□ 0.98
SPPL3-207ENST00000543608 LDHDQ86WU2 507 aa21.16■□□□□ 0.98
SPPL3-207ENST00000543608 IFT57Q9NWB7 429 aa21.16■□□□□ 0.98
SPPL3-207ENST00000543608 ATP6V0A2Q9Y487 856 aa21.16■□□□□ 0.98
SPPL3-207ENST00000543608 GJA3Q9Y6H8 435 aa21.16■□□□□ 0.98
SPPL3-207ENST00000543608 PCNTO95613 3336 aa21.16■□□□□ 0.98
SPPL3-207ENST00000543608 COL4A1P02462 1669 aa21.15■□□□□ 0.98
SPPL3-207ENST00000543608 EPHX2P34913 555 aa21.15■□□□□ 0.98
SPPL3-207ENST00000543608 GPC2Q8N158 579 aa21.15■□□□□ 0.98
SPPL3-207ENST00000543608 GNAI1P63096 354 aa21.14■□□□□ 0.97
SPPL3-207ENST00000543608 AOC3Q16853 763 aa21.14■□□□□ 0.97
SPPL3-207ENST00000543608 ISCA1Q9BUE6 129 aa21.14■□□□□ 0.97
SPPL3-207ENST00000543608 HYPKQ9NX55 129 aa21.14■□□□□ 0.97
SPPL3-207ENST00000543608 LRRC37AA6NMS7 1700 aa21.13■□□□□ 0.97
SPPL3-207ENST00000543608 PPIP5K2O43314 1243 aa21.13■□□□□ 0.97
SPPL3-207ENST00000543608 EIF6P56537 245 aaKnown RBP21.13■□□□□ 0.97
SPPL3-207ENST00000543608 GRIPAP1Q4V328 841 aa21.13■□□□□ 0.97
SPPL3-207ENST00000543608 RTL5Q5HYW3 569 aaPredicted RBP21.13■□□□□ 0.97
SPPL3-207ENST00000543608 IFFO2Q5TF58 517 aa21.13■□□□□ 0.97
SPPL3-207ENST00000543608 FAM89AQ96GI7 184 aa21.13■□□□□ 0.97
SPPL3-207ENST00000543608 PHAXQ9H814 394 aaKnown RBP21.13■□□□□ 0.97
SPPL3-207ENST00000543608 DUOX1Q9NRD9 1551 aa21.13■□□□□ 0.97
SPPL3-207ENST00000543608 CALD1Q05682 793 aaKnown RBP21.12■□□□□ 0.97
SPPL3-207ENST00000543608 DDX46Q7L014 1031 aaKnown RBP21.12■□□□□ 0.97
SPPL3-207ENST00000543608 C8orf58Q8NAV2 365 aa21.12■□□□□ 0.97
SPPL3-207ENST00000543608 TMX4Q9H1E5 349 aaPredicted RBP21.12■□□□□ 0.97
SPPL3-207ENST00000543608 CLEC11AQ9Y240 323 aa21.12■□□□□ 0.97
SPPL3-207ENST00000543608 PASKQ96RG2 1323 aa21.11■□□□□ 0.97
SPPL3-207ENST00000543608 GRAPQ13588 217 aa21.11■□□□□ 0.97
SPPL3-207ENST00000543608 NIM1KQ8IY84 436 aa21.11■□□□□ 0.97
SPPL3-207ENST00000543608 GRAPLQ8TC17 118 aaPredicted RBP21.11■□□□□ 0.97
SPPL3-207ENST00000543608 SCNN1DP51172 638 aa21.1■□□□□ 0.97
SPPL3-207ENST00000543608 DPP8Q6V1X1 898 aaPredicted RBP21.1■□□□□ 0.97
SPPL3-207ENST00000543608 CREBZFQ9NS37 354 aa21.1■□□□□ 0.97
SPPL3-207ENST00000543608 MKRN1Q9UHC7 482 aaKnown RBP21.1■□□□□ 0.97
SPPL3-207ENST00000543608 BBOX1O75936 387 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms