RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 GRIP2Q9C0E4 1043 aa8.59□□□□□ -1.03
MDM2-230ENST00000543323 LNPKQ9C0E8 428 aa8.59□□□□□ -1.03
MDM2-230ENST00000543323 GPC1P35052 558 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 SLC19A1P41440 591 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 PLA2G4AP47712 749 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 RACK1P63244 317 aaKnown RBP8.58□□□□□ -1.04
MDM2-230ENST00000543323 XKR5Q6UX68 686 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 HS2ST1Q7LGA3 356 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 USP48Q86UV5 1035 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 C7orf43Q8WVR3 580 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 ZNF395Q9H8N7 513 aaPredicted RBP8.58□□□□□ -1.04
MDM2-230ENST00000543323 PCDHGB7Q9Y5F8 929 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 USP31Q70CQ4 1352 aa8.58□□□□□ -1.04
MDM2-230ENST00000543323 TNFRSF21O75509 655 aa8.57□□□□□ -1.04
MDM2-230ENST00000543323 ARID5AQ03989 594 aa8.57□□□□□ -1.04
MDM2-230ENST00000543323 NBPF1Q3BBV0 1214 aa8.57□□□□□ -1.04
MDM2-230ENST00000543323 C4orf17Q53FE4 359 aa8.57□□□□□ -1.04
MDM2-230ENST00000543323 NOP9Q86U38 636 aaKnown RBP8.57□□□□□ -1.04
MDM2-230ENST00000543323 SNX29Q8TEQ0 813 aa8.57□□□□□ -1.04
MDM2-230ENST00000543323 CCDC74AQ96AQ1 378 aa8.57□□□□□ -1.04
MDM2-230ENST00000543323 ZFAND3Q9H8U3 227 aa8.57□□□□□ -1.04
MDM2-230ENST00000543323 SRA1Q9HD15 236 aaKnown RBP8.57□□□□□ -1.04
MDM2-230ENST00000543323 ZDHHC3Q9NYG2 299 aa8.57□□□□□ -1.04
MDM2-230ENST00000543323 DMGDHQ9UI17 866 aaKnown RBP8.57□□□□□ -1.04
MDM2-230ENST00000543323 FOXD3Q9UJU5 478 aaPredicted RBP8.57□□□□□ -1.04
MDM2-230ENST00000543323 GPC6Q9Y625 555 aaPredicted RBP8.57□□□□□ -1.04
MDM2-230ENST00000543323 IDH3AP50213 366 aa8.56□□□□□ -1.04
MDM2-230ENST00000543323 WDR4P57081 412 aaKnown RBP8.56□□□□□ -1.04
MDM2-230ENST00000543323 SLC27A3Q5K4L6 730 aa8.56□□□□□ -1.04
MDM2-230ENST00000543323 USPL1Q5W0Q7 1092 aa8.56□□□□□ -1.04
MDM2-230ENST00000543323 SUSD3Q96L08 255 aa8.56□□□□□ -1.04
MDM2-230ENST00000543323 OSBPL7Q9BZF2 842 aa8.56□□□□□ -1.04
MDM2-230ENST00000543323 FNDC3AQ9Y2H6 1198 aaKnown RBP8.56□□□□□ -1.04
MDM2-230ENST00000543323 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
MDM2-230ENST00000543323 PI16Q6UXB8 463 aa8.55□□□□□ -1.04
MDM2-230ENST00000543323 EPS8L3Q8TE67 593 aaKnown RBP8.55□□□□□ -1.04
MDM2-230ENST00000543323 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
MDM2-230ENST00000543323 GGT7Q9UJ14 662 aa8.55□□□□□ -1.04
MDM2-230ENST00000543323 TIMP2P16035 220 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 IRS1P35568 1242 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 ST13P50502 369 aaKnown RBP8.54□□□□□ -1.04
MDM2-230ENST00000543323 RNF144AP50876 292 aaPredicted RBP8.54□□□□□ -1.04
MDM2-230ENST00000543323 ARSDP51689 593 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 RBL2Q08999 1139 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 TAF1CQ15572 869 aaPredicted RBP8.54□□□□□ -1.04
MDM2-230ENST00000543323 PDE12Q6L8Q7 609 aaKnown RBP8.54□□□□□ -1.04
MDM2-230ENST00000543323 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
MDM2-230ENST00000543323 ZNF438Q7Z4V0 828 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 VPS37DQ86XT2 251 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 ZNF280CQ8ND82 737 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 SNIP1Q8TAD8 396 aaKnown RBP8.54□□□□□ -1.04
MDM2-230ENST00000543323 AIDAQ96BJ3 306 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
MDM2-230ENST00000543323 TATP17735 454 aaPredicted RBP8.53□□□□□ -1.04
MDM2-230ENST00000543323 MEI1Q5TIA1 1274 aa8.53□□□□□ -1.04
MDM2-230ENST00000543323 MEIOBQ8N635 442 aa8.53□□□□□ -1.04
MDM2-230ENST00000543323 KLRG1Q96E93 195 aa8.53□□□□□ -1.04
MDM2-230ENST00000543323 HSH2DQ96JZ2 352 aa8.53□□□□□ -1.04
MDM2-230ENST00000543323 SRCIN1Q9C0H9 1055 aa8.53□□□□□ -1.04
MDM2-230ENST00000543323 ANKIB1Q9P2G1 1089 aa8.53□□□□□ -1.04
MDM2-230ENST00000543323 A0A0G2JS52 829 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 SPATA31C2B4DYI2 1134 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 UBAP1LF5GYI3 381 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 PHACTR2O75167 634 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 USP17L7P0C7H9 530 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 INPP5BP32019 993 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 TRIP4Q15650 581 aaPredicted RBP8.52□□□□□ -1.05
MDM2-230ENST00000543323 CCDC144BQ3MJ40 725 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 ZNF697Q5TEC3 545 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 HIRIP3Q9BW71 556 aaPredicted RBP8.52□□□□□ -1.05
MDM2-230ENST00000543323 USP20Q9Y2K6 914 aa8.52□□□□□ -1.05
MDM2-230ENST00000543323 RTCBQ9Y3I0 505 aaKnown RBP8.52□□□□□ -1.05
MDM2-230ENST00000543323 NCLP19338 710 aaKnown RBP8.51□□□□□ -1.05
MDM2-230ENST00000543323 GJA8P48165 433 aa8.51□□□□□ -1.05
MDM2-230ENST00000543323 FOXC1Q12948 553 aa8.51□□□□□ -1.05
MDM2-230ENST00000543323 SOGA3Q5TF21 947 aa8.51□□□□□ -1.05
MDM2-230ENST00000543323 ZNF598Q86UK7 904 aaKnown RBP8.51□□□□□ -1.05
MDM2-230ENST00000543323 CMTR1Q8N1G2 835 aaKnown RBP8.51□□□□□ -1.05
MDM2-230ENST00000543323 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
MDM2-230ENST00000543323 PKD2L1Q9P0L9 805 aa8.51□□□□□ -1.05
MDM2-230ENST00000543323 TMA7Q9Y2S6 64 aaKnown RBP8.51□□□□□ -1.05
MDM2-230ENST00000543323 KCNMB2Q9Y691 235 aa8.51□□□□□ -1.05
MDM2-230ENST00000543323 PPM1GO15355 546 aaPredicted RBP8.5□□□□□ -1.05
MDM2-230ENST00000543323 FGRP09769 529 aa8.5□□□□□ -1.05
MDM2-230ENST00000543323 BICDL1Q6ZP65 573 aa8.5□□□□□ -1.05
MDM2-230ENST00000543323 ERMP1Q7Z2K6 904 aa8.5□□□□□ -1.05
MDM2-230ENST00000543323 BTLAQ7Z6A9 289 aa8.5□□□□□ -1.05
MDM2-230ENST00000543323 MCF2L2Q86YR7 1114 aa8.5□□□□□ -1.05
MDM2-230ENST00000543323 PMFBP1Q8TBY8 1022 aa8.5□□□□□ -1.05
MDM2-230ENST00000543323 INSM2Q96T92 566 aaPredicted RBP8.5□□□□□ -1.05
MDM2-230ENST00000543323 NPHS2Q9NP85 383 aa8.5□□□□□ -1.05
MDM2-230ENST00000543323 J3QL48 77 aa8.49□□□□□ -1.05
MDM2-230ENST00000543323 PHKA2P46019 1235 aa8.49□□□□□ -1.05
MDM2-230ENST00000543323 NXPE4Q6UWF7 544 aa8.49□□□□□ -1.05
MDM2-230ENST00000543323 GALNT12Q8IXK2 581 aa8.49□□□□□ -1.05
MDM2-230ENST00000543323 TSEN34Q9BSV6 310 aaKnown RBP8.49□□□□□ -1.05
MDM2-230ENST00000543323 BCO2Q9BYV7 579 aa8.49□□□□□ -1.05
MDM2-230ENST00000543323 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
MDM2-230ENST00000543323 TMEM63CQ9P1W3 806 aa8.49□□□□□ -1.05
MDM2-230ENST00000543323 V9GY48 417 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms