RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 COPS6Q7L5N1 327 aa15.79■□□□□ 0.12
PTPN6-220ENST00000543115 LAS1LQ9Y4W2 734 aaKnown RBP15.79■□□□□ 0.12
PTPN6-220ENST00000543115 ZNF541Q9H0D2 1346 aa15.78■□□□□ 0.12
PTPN6-220ENST00000543115 POTEIP0CG38 1075 aa15.78■□□□□ 0.12
PTPN6-220ENST00000543115 POTEJP0CG39 1038 aa15.78■□□□□ 0.12
PTPN6-220ENST00000543115 HOXA10P31260 410 aaPredicted RBP15.78■□□□□ 0.12
PTPN6-220ENST00000543115 AIMP1Q12904 312 aaKnown RBP15.78■□□□□ 0.12
PTPN6-220ENST00000543115 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
PTPN6-220ENST00000543115 XAGE3Q8WTP9 111 aa15.78■□□□□ 0.12
PTPN6-220ENST00000543115 PARP10Q53GL7 1025 aa15.77■□□□□ 0.12
PTPN6-220ENST00000543115 PPP1R42Q7Z4L9 355 aa15.77■□□□□ 0.12
PTPN6-220ENST00000543115 SYNE4Q8N205 404 aa15.77■□□□□ 0.12
PTPN6-220ENST00000543115 RPGRQ92834 1020 aaKnown RBP15.77■□□□□ 0.12
PTPN6-220ENST00000543115 KLRG1Q96E93 195 aa15.77■□□□□ 0.12
PTPN6-220ENST00000543115 IARSP41252 1262 aaKnown RBP15.76■□□□□ 0.11
PTPN6-220ENST00000543115 DDX21Q9NR30 783 aaKnown RBP eCLIP15.76■□□□□ 0.11
PTPN6-220ENST00000543115 CHPF2Q9P2E5 772 aa15.76■□□□□ 0.11
PTPN6-220ENST00000543115 L3MBTL3Q96JM7 780 aaPredicted RBP15.75■□□□□ 0.11
PTPN6-220ENST00000543115 CRAMP1Q96RY5 1269 aa15.75■□□□□ 0.11
PTPN6-220ENST00000543115 PSMD1Q99460 953 aa15.75■□□□□ 0.11
PTPN6-220ENST00000543115 UTP14AQ9BVJ6 771 aaKnown RBP15.75■□□□□ 0.11
PTPN6-220ENST00000543115 COL4A5P29400 1685 aa15.75■□□□□ 0.11
PTPN6-220ENST00000543115 FZD9O00144 591 aa15.74■□□□□ 0.11
PTPN6-220ENST00000543115 TCERG1O14776 1098 aaKnown RBP15.74■□□□□ 0.11
PTPN6-220ENST00000543115 SLC10A5Q5PT55 438 aa15.74■□□□□ 0.11
PTPN6-220ENST00000543115 NLRP10Q86W26 655 aa15.74■□□□□ 0.11
PTPN6-220ENST00000543115 RBM17Q96I25 401 aaKnown RBP15.74■□□□□ 0.11
PTPN6-220ENST00000543115 CFAP44Q96MT7 982 aa15.74■□□□□ 0.11
PTPN6-220ENST00000543115 NLRP3Q96P20 1036 aa15.74■□□□□ 0.11
PTPN6-220ENST00000543115 APAF1O14727 1248 aa15.73■□□□□ 0.11
PTPN6-220ENST00000543115 PPEF1O14829 653 aaPredicted RBP15.73■□□□□ 0.11
PTPN6-220ENST00000543115 TCIRG1Q13488 830 aa15.73■□□□□ 0.11
PTPN6-220ENST00000543115 HDGFL1Q5TGJ6 251 aa15.73■□□□□ 0.11
PTPN6-220ENST00000543115 CC2D2BQ6DHV5 1058 aa15.73■□□□□ 0.11
PTPN6-220ENST00000543115 JMYQ8N9B5 988 aa15.73■□□□□ 0.11
PTPN6-220ENST00000543115 ZNF428Q96B54 188 aa15.73■□□□□ 0.11
PTPN6-220ENST00000543115 TAF1DQ9H5J8 278 aaPredicted RBP15.73■□□□□ 0.11
PTPN6-220ENST00000543115 MBIPQ9NS73 344 aa15.73■□□□□ 0.11
PTPN6-220ENST00000543115 IQCA1LA6NCM1 817 aa15.72■□□□□ 0.11
PTPN6-220ENST00000543115 HCLS1P14317 486 aaPredicted RBP15.72■□□□□ 0.11
PTPN6-220ENST00000543115 HSP90AB3PQ58FF7 597 aa15.72■□□□□ 0.11
PTPN6-220ENST00000543115 CHADLQ6NUI6 762 aa15.72■□□□□ 0.11
PTPN6-220ENST00000543115 ANKRD36CQ5JPF3 1778 aa15.72■□□□□ 0.11
PTPN6-220ENST00000543115 ABCC4O15439 1325 aa15.71■□□□□ 0.11
PTPN6-220ENST00000543115 HOXB7P09629 217 aa15.71■□□□□ 0.11
PTPN6-220ENST00000543115 ZNF853P0CG23 659 aa15.71■□□□□ 0.11
PTPN6-220ENST00000543115 CCDC184Q52MB2 194 aa15.71■□□□□ 0.11
PTPN6-220ENST00000543115 DUSP27Q5VZP5 1158 aa15.71■□□□□ 0.11
PTPN6-220ENST00000543115 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
PTPN6-220ENST00000543115 PLBD2Q8NHP8 589 aa15.7■□□□□ 0.1
PTPN6-220ENST00000543115 DBF4Q9UBU7 674 aaPredicted RBP15.7■□□□□ 0.1
PTPN6-220ENST00000543115 TRMT112Q9UI30 125 aaKnown RBP15.7■□□□□ 0.1
PTPN6-220ENST00000543115 ANKRD13DQ6ZTN6 518 aa15.69■□□□□ 0.1
PTPN6-220ENST00000543115 LDHDQ86WU2 507 aa15.69■□□□□ 0.1
PTPN6-220ENST00000543115 JDP2Q8WYK2 163 aa15.69■□□□□ 0.1
PTPN6-220ENST00000543115 HACL1Q9UJ83 578 aa15.69■□□□□ 0.1
PTPN6-220ENST00000543115 ATP6V0A2Q9Y487 856 aa15.69■□□□□ 0.1
PTPN6-220ENST00000543115 SH3TC1Q8TE82 1336 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 SCN4AP35499 1836 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 LAMB2P55268 1798 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 EPHX2P34913 555 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 GRIPAP1Q4V328 841 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 EAPPQ56P03 285 aaPredicted RBP15.68■□□□□ 0.1
PTPN6-220ENST00000543115 GPC2Q8N158 579 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 LARGE2Q8N3Y3 721 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 ISCA1Q9BUE6 129 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
PTPN6-220ENST00000543115 ELL2O00472 640 aaPredicted RBP15.67■□□□□ 0.1
PTPN6-220ENST00000543115 AOC3Q16853 763 aa15.67■□□□□ 0.1
PTPN6-220ENST00000543115 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
PTPN6-220ENST00000543115 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
PTPN6-220ENST00000543115 ADAMTSL1Q8N6G6 1762 aa15.67■□□□□ 0.1
PTPN6-220ENST00000543115 PASKQ96RG2 1323 aa15.67■□□□□ 0.1
PTPN6-220ENST00000543115 LTBP1Q14766 1721 aa15.66■□□□□ 0.1
PTPN6-220ENST00000543115 ITGBL1O95965 494 aaPredicted RBP15.66■□□□□ 0.1
PTPN6-220ENST00000543115 EIF6P56537 245 aaKnown RBP15.66■□□□□ 0.1
PTPN6-220ENST00000543115 FAM89AQ96GI7 184 aa15.66■□□□□ 0.1
PTPN6-220ENST00000543115 PHAXQ9H814 394 aaKnown RBP15.66■□□□□ 0.1
PTPN6-220ENST00000543115 PPIP5K2O43314 1243 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 BBOX1O75936 387 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 SCNN1DP51172 638 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 GNAI1P63096 354 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 GRAPQ13588 217 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 DDX46Q7L014 1031 aaKnown RBP15.65■□□□□ 0.1
PTPN6-220ENST00000543115 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 C8orf58Q8NAV2 365 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 GRAPLQ8TC17 118 aaPredicted RBP15.65■□□□□ 0.1
PTPN6-220ENST00000543115 RTFDC1Q9BY42 306 aaPredicted RBP15.65■□□□□ 0.1
PTPN6-220ENST00000543115 CREBZFQ9NS37 354 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 CLEC11AQ9Y240 323 aa15.65■□□□□ 0.1
PTPN6-220ENST00000543115 DDX60Q8IY21 1712 aaKnown RBP15.65■□□□□ 0.1
PTPN6-220ENST00000543115 COL4A1P02462 1669 aa15.64■□□□□ 0.09
PTPN6-220ENST00000543115 RTL5Q5HYW3 569 aaPredicted RBP15.64■□□□□ 0.09
PTPN6-220ENST00000543115 NIM1KQ8IY84 436 aa15.64■□□□□ 0.09
PTPN6-220ENST00000543115 EPS15P42566 896 aa15.63■□□□□ 0.09
PTPN6-220ENST00000543115 CALD1Q05682 793 aaKnown RBP15.63■□□□□ 0.09
PTPN6-220ENST00000543115 MAP1SQ66K74 1059 aaPredicted RBP15.63■□□□□ 0.09
PTPN6-220ENST00000543115 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
PTPN6-220ENST00000543115 PNMA8AQ86V59 439 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms