RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 IL1RAPL2Q9NP60 686 aa11.46□□□□□ -0.57
TCF4-208ENST00000543082 LRRFIP2Q9Y608 721 aaKnown RBP11.46□□□□□ -0.57
TCF4-208ENST00000543082 CPA1P15085 419 aa11.46□□□□□ -0.58
TCF4-208ENST00000543082 RRS1Q15050 365 aaKnown RBP11.46□□□□□ -0.58
TCF4-208ENST00000543082 SULT6B1Q6IMI4 303 aa11.46□□□□□ -0.58
TCF4-208ENST00000543082 LEO1Q8WVC0 666 aaPredicted RBP11.46□□□□□ -0.58
TCF4-208ENST00000543082 SPATA31D1Q6ZQQ2 1576 aa11.46□□□□□ -0.58
TCF4-208ENST00000543082 CPS1P31327 1500 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 CCDC69A6NI79 296 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 MAP4K4O95819 1239 aaPredicted RBP11.45□□□□□ -0.58
TCF4-208ENST00000543082 CCZ1BP86790 482 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 CCZ1P86791 482 aaPredicted RBP11.45□□□□□ -0.58
TCF4-208ENST00000543082 ME3Q16798 604 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 TEX35Q5T0J7 233 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 BICD2Q8TD16 824 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 SSH3Q8TE77 659 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 L2HGDHQ9H9P8 463 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 ST7Q9NRC1 585 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 MAP3K5Q99683 1374 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 GSDMDP57764 484 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 FLIIQ13045 1269 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 IQCB1Q15051 598 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 CWC27Q6UX04 472 aaKnown RBP11.45□□□□□ -0.58
TCF4-208ENST00000543082 FERMT3Q86UX7 667 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.45□□□□□ -0.58
TCF4-208ENST00000543082 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 SPG7Q9UQ90 795 aa11.45□□□□□ -0.58
TCF4-208ENST00000543082 LRRC37A3O60309 1634 aa11.44□□□□□ -0.58
TCF4-208ENST00000543082 TUBB4AP04350 444 aa11.44□□□□□ -0.58
TCF4-208ENST00000543082 UBTFL1P0CB47 393 aaPredicted RBP11.44□□□□□ -0.58
TCF4-208ENST00000543082 HNRNPH2P55795 449 aaKnown RBP11.44□□□□□ -0.58
TCF4-208ENST00000543082 TPM4P67936 248 aa11.44□□□□□ -0.58
TCF4-208ENST00000543082 EIF4A2Q14240 407 aaKnown RBP11.44□□□□□ -0.58
TCF4-208ENST00000543082 STX1AQ16623 288 aa11.44□□□□□ -0.58
TCF4-208ENST00000543082 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
TCF4-208ENST00000543082 USP42Q9H9J4 1324 aaKnown RBP11.44□□□□□ -0.58
TCF4-208ENST00000543082 NR1I2O75469 434 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 ZKSCAN1P17029 563 aaPredicted RBP11.43□□□□□ -0.58
TCF4-208ENST00000543082 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
TCF4-208ENST00000543082 FILIP1Q7Z7B0 1213 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 TXLNBQ8N3L3 684 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 ARGLU1Q9NWB6 273 aaPredicted RBP11.43□□□□□ -0.58
TCF4-208ENST00000543082 ZRANB1Q9UGI0 708 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 FMN2Q9NZ56 1722 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 NEO1Q92859 1461 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 CTAGE5O15320 804 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
TCF4-208ENST00000543082 PNMA6AP0CW24 399 aaPredicted RBP11.43□□□□□ -0.58
TCF4-208ENST00000543082 SNW1Q13573 536 aaKnown RBP11.43□□□□□ -0.58
TCF4-208ENST00000543082 ARID5BQ14865 1188 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 ANKRD1Q15327 319 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 ADCK5Q3MIX3 580 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 NECAB1Q8N987 351 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 GTF3C6Q969F1 213 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 FEZ2Q9UHY8 353 aaPredicted RBP11.43□□□□□ -0.58
TCF4-208ENST00000543082 TTC41PQ6P2S7 1318 aa11.43□□□□□ -0.58
TCF4-208ENST00000543082 MUM1L1Q5H9M0 696 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 CCDC30Q5VVM6 783 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 FAM173BQ6P4H8 233 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 TRIM34Q9BYJ4 488 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 TRMT1Q9NXH9 659 aaKnown RBP11.42□□□□□ -0.58
TCF4-208ENST00000543082 NALCNQ8IZF0 1738 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 SURF6O75683 361 aaKnown RBP11.42□□□□□ -0.58
TCF4-208ENST00000543082 GLRX3O76003 335 aaKnown RBP11.42□□□□□ -0.58
TCF4-208ENST00000543082 PSMA5P28066 241 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 CLCN6P51797 869 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 RAD51AP2Q09MP3 1159 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 POLA2Q14181 598 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 DHX8Q14562 1220 aaKnown RBP11.42□□□□□ -0.58
TCF4-208ENST00000543082 TPCN1Q9ULQ1 816 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 RICTORQ6R327 1708 aa11.42□□□□□ -0.58
TCF4-208ENST00000543082 BECN2A8MW95 431 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 KCNJ6P48051 423 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 PTH1RQ03431 593 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 ERCC6LQ2NKX8 1250 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 IMPACTQ9P2X3 320 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
TCF4-208ENST00000543082 WASLO00401 505 aaPredicted RBP11.41□□□□□ -0.58
TCF4-208ENST00000543082 PLA2G4AP47712 749 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 HSP90AB4PQ58FF6 505 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 TMCO3Q6UWJ1 677 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 C11orf57Q6ZUT1 292 aaPredicted RBP11.41□□□□□ -0.58
TCF4-208ENST00000543082 CCDC150Q8NCX0 1101 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 PGBD1Q96JS3 809 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 PEAK1Q9H792 1746 aa11.41□□□□□ -0.58
TCF4-208ENST00000543082 TFIP11Q9UBB9 837 aaKnown RBP11.41□□□□□ -0.58
TCF4-208ENST00000543082 RIMS1Q86UR5 1692 aaKnown RBP11.41□□□□□ -0.58
TCF4-208ENST00000543082 ATP8B1O43520 1251 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 NECTIN1Q15223 517 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 CCDC93Q567U6 631 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 USP44Q9H0E7 712 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 OSBPL5Q9H0X9 879 aaPredicted RBP11.4□□□□□ -0.58
TCF4-208ENST00000543082 MIS18AQ9NYP9 233 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.4□□□□□ -0.58
TCF4-208ENST00000543082 USP16Q9Y5T5 823 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 NRDCO43847 1150 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 DTNBO60941 627 aa11.4□□□□□ -0.58
TCF4-208ENST00000543082 ZRANB2O95218 330 aaKnown RBP eCLIP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms