RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 PNPLA6Q8IY17 1366 aa7.67□□□□□ -1.18
CDKN3-206ENST00000541304 SIAH2O43255 324 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 PPP2R1AP30153 589 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 CTHP32929 405 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 CSPP1Q1MSJ5 1256 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 MYSM1Q5VVJ2 828 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 LYPD8Q6UX82 237 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 NUDCQ9Y266 331 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 WASF2Q9Y6W5 498 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 MARF1Q9Y4F3 1742 aaKnown RBP7.66□□□□□ -1.18
CDKN3-206ENST00000541304 CRYBG1Q9Y4K1 1723 aa7.66□□□□□ -1.18
CDKN3-206ENST00000541304 GCP02774 474 aa7.65□□□□□ -1.18
CDKN3-206ENST00000541304 PIP4K2BP78356 416 aa7.65□□□□□ -1.18
CDKN3-206ENST00000541304 TUSC1Q2TAM9 212 aa7.65□□□□□ -1.18
CDKN3-206ENST00000541304 CABLES1Q8TDN4 633 aa7.65□□□□□ -1.18
CDKN3-206ENST00000541304 BAP1Q92560 729 aa7.65□□□□□ -1.18
CDKN3-206ENST00000541304 ABCA3Q99758 1704 aa7.65□□□□□ -1.18
CDKN3-206ENST00000541304 PNNQ9H307 717 aaKnown RBP7.65□□□□□ -1.18
CDKN3-206ENST00000541304 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
CDKN3-206ENST00000541304 TLL2Q9Y6L7 1015 aa7.65□□□□□ -1.18
CDKN3-206ENST00000541304 FAM208AQ9UK61 1670 aaKnown RBP7.64□□□□□ -1.19
CDKN3-206ENST00000541304 F12P00748 615 aaPredicted RBP7.64□□□□□ -1.19
CDKN3-206ENST00000541304 XPCQ01831 940 aaPredicted RBP7.64□□□□□ -1.19
CDKN3-206ENST00000541304 MRS2Q9HD23 443 aa7.64□□□□□ -1.19
CDKN3-206ENST00000541304 MAP10Q9P2G4 905 aa7.64□□□□□ -1.19
CDKN3-206ENST00000541304 LIMD1Q9UGP4 676 aa7.64□□□□□ -1.19
CDKN3-206ENST00000541304 MAP3K19Q56UN5 1328 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 VARSP26640 1264 aaKnown RBP7.63□□□□□ -1.19
CDKN3-206ENST00000541304 AMPHP49418 695 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 CLK2P49760 499 aaKnown RBP7.63□□□□□ -1.19
CDKN3-206ENST00000541304 MTHFSP49914 203 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 ARHGEF25Q86VW2 580 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 NGEFQ8N5V2 710 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 FBXO41Q8TF61 875 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 KIFC2Q96AC6 838 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 TRIM47Q96LD4 638 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 POLKQ9UBT6 870 aa7.63□□□□□ -1.19
CDKN3-206ENST00000541304 COL3A1P02461 1466 aaPredicted RBP7.62□□□□□ -1.19
CDKN3-206ENST00000541304 COL14A1Q05707 1796 aaKnown RBP7.62□□□□□ -1.19
CDKN3-206ENST00000541304 NUTM2BA6NNL0 878 aaPredicted RBP7.62□□□□□ -1.19
CDKN3-206ENST00000541304 NUTM2EB1AL46 878 aaPredicted RBP7.62□□□□□ -1.19
CDKN3-206ENST00000541304 DIAPH1O60610 1272 aaKnown RBP7.62□□□□□ -1.19
CDKN3-206ENST00000541304 WDR43Q15061 677 aaKnown RBP eCLIP7.62□□□□□ -1.19
CDKN3-206ENST00000541304 NUTM2AQ8IVF1 878 aaPredicted RBP7.62□□□□□ -1.19
CDKN3-206ENST00000541304 HELBQ8NG08 1087 aaPredicted RBP7.62□□□□□ -1.19
CDKN3-206ENST00000541304 IP6K1Q92551 441 aa7.62□□□□□ -1.19
CDKN3-206ENST00000541304 TSC1Q92574 1164 aa7.62□□□□□ -1.19
CDKN3-206ENST00000541304 NEFMP07197 916 aa7.61□□□□□ -1.19
CDKN3-206ENST00000541304 HOXC9P31274 260 aa7.61□□□□□ -1.19
CDKN3-206ENST00000541304 TNNT2P45379 298 aaPredicted RBP7.61□□□□□ -1.19
CDKN3-206ENST00000541304 QPCTQ16769 361 aa7.61□□□□□ -1.19
CDKN3-206ENST00000541304 TREML4Q6UXN2 200 aa7.61□□□□□ -1.19
CDKN3-206ENST00000541304 DDX17Q92841 729 aaKnown RBP7.61□□□□□ -1.19
CDKN3-206ENST00000541304 PRDM11Q9NQV5 511 aa7.61□□□□□ -1.19
CDKN3-206ENST00000541304 LTN1O94822 1766 aa7.61□□□□□ -1.19
CDKN3-206ENST00000541304 LMO7Q8WWI1 1683 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 KIAA0232Q92628 1395 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 LILRB3O75022 631 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 NUTM2GQ5VZR2 741 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 MPNDQ8N594 471 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 FAM174AQ8TBP5 190 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 RSPH6AQ9H0K4 717 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 EMILIN1Q9Y6C2 1016 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 NWD2Q9ULI1 1742 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 CAMTA1Q9Y6Y1 1673 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 NCAPD2Q15021 1401 aa7.6□□□□□ -1.19
CDKN3-206ENST00000541304 MAP2P11137 1827 aaKnown RBP7.59□□□□□ -1.19
CDKN3-206ENST00000541304 PEAK1Q9H792 1746 aa7.59□□□□□ -1.19
CDKN3-206ENST00000541304 CAPN5O15484 640 aaPredicted RBP7.59□□□□□ -1.19
CDKN3-206ENST00000541304 NNTQ13423 1086 aa7.59□□□□□ -1.19
CDKN3-206ENST00000541304 RRS1Q15050 365 aaKnown RBP7.59□□□□□ -1.19
CDKN3-206ENST00000541304 PNISRQ8TF01 805 aaKnown RBP7.59□□□□□ -1.19
CDKN3-206ENST00000541304 KDRP35968 1356 aa7.59□□□□□ -1.2
CDKN3-206ENST00000541304 IGSF1Q8N6C5 1336 aa7.58□□□□□ -1.2
CDKN3-206ENST00000541304 COL5A2P05997 1499 aaPredicted RBP7.58□□□□□ -1.2
CDKN3-206ENST00000541304 PPM1GO15355 546 aaPredicted RBP7.58□□□□□ -1.2
CDKN3-206ENST00000541304 BMP1P13497 986 aa7.58□□□□□ -1.2
CDKN3-206ENST00000541304 SNRPBP14678 240 aaKnown RBP7.58□□□□□ -1.2
CDKN3-206ENST00000541304 IL13P35225 146 aa7.58□□□□□ -1.2
CDKN3-206ENST00000541304 CNGB1Q14028 1251 aaPredicted RBP7.58□□□□□ -1.2
CDKN3-206ENST00000541304 STK17AQ9UEE5 414 aa7.58□□□□□ -1.2
CDKN3-206ENST00000541304 RGPD1P0DJD0 1748 aa7.58□□□□□ -1.2
CDKN3-206ENST00000541304 WDR17Q8IZU2 1322 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 COL18A1P39060 1754 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 WFS1O76024 890 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 ADH1CP00326 375 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 HSPA1LP34931 641 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 LCE2AQ5TA79 106 aaPredicted RBP7.57□□□□□ -1.2
CDKN3-206ENST00000541304 NBPF14Q5TI25 921 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 ARMC2Q8NEN0 867 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 FOXJ1Q92949 421 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 CRB1P82279 1406 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.57□□□□□ -1.2
CDKN3-206ENST00000541304 SLIT2O94813 1529 aa7.57□□□□□ -1.2
CDKN3-206ENST00000541304 MAPK8IP3Q9UPT6 1336 aa7.56□□□□□ -1.2
CDKN3-206ENST00000541304 U2AF1L5P0DN76 240 aaPredicted RBP7.56□□□□□ -1.2
CDKN3-206ENST00000541304 ZC3H6P61129 1189 aaKnown RBP7.56□□□□□ -1.2
CDKN3-206ENST00000541304 U2AF1Q01081 240 aaKnown RBP eCLIP7.56□□□□□ -1.2
CDKN3-206ENST00000541304 EIF4A2Q14240 407 aaKnown RBP7.56□□□□□ -1.2
CDKN3-206ENST00000541304 AGERQ15109 404 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms