RNA–Protein interactions for RNA: ENST00000540838.1

KDM5A-207, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-207ENST00000540838 MEIOBQ8N635 442 aa8.34□□□□□ -1.07
KDM5A-207ENST00000540838 VRTNQ9H8Y1 702 aa8.34□□□□□ -1.07
KDM5A-207ENST00000540838 NXF1Q9UBU9 619 aaKnown RBP8.34□□□□□ -1.07
KDM5A-207ENST00000540838 IVNS1ABPQ9Y6Y0 642 aa8.34□□□□□ -1.07
KDM5A-207ENST00000540838 UNC13BO14795 1591 aa8.34□□□□□ -1.07
KDM5A-207ENST00000540838 DIP2AQ14689 1571 aa8.34□□□□□ -1.07
KDM5A-207ENST00000540838 PHLPP1O60346 1717 aa8.34□□□□□ -1.07
KDM5A-207ENST00000540838 FBXO45P0C2W1 286 aa8.33□□□□□ -1.08
KDM5A-207ENST00000540838 VEGFBP49765 207 aa8.33□□□□□ -1.08
KDM5A-207ENST00000540838 ELOAQ14241 798 aaKnown RBP8.33□□□□□ -1.08
KDM5A-207ENST00000540838 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
KDM5A-207ENST00000540838 ZBBXA8MT70 800 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 MAN1A2O60476 641 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 ITGAEP38570 1179 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 CDCA8Q53HL2 280 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 ZNF326Q5BKZ1 582 aaKnown RBP8.32□□□□□ -1.08
KDM5A-207ENST00000540838 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
KDM5A-207ENST00000540838 BRINP3Q76B58 766 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 SND1Q7KZF4 910 aaKnown RBP eCLIP8.32□□□□□ -1.08
KDM5A-207ENST00000540838 NFATC2IPQ8NCF5 419 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 SLC16A10Q8TF71 515 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 LRRC59Q96AG4 307 aaKnown RBP8.32□□□□□ -1.08
KDM5A-207ENST00000540838 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
KDM5A-207ENST00000540838 TMPRSS4Q9NRS4 437 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 ZMIZ1Q9ULJ6 1067 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 PCDHB9Q9Y5E1 797 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 E9PCH4 1651 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 TRPM2O94759 1503 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 IQGAP3Q86VI3 1631 aa8.32□□□□□ -1.08
KDM5A-207ENST00000540838 MYO5BQ9ULV0 1848 aa8.31□□□□□ -1.08
KDM5A-207ENST00000540838 DCCP43146 1447 aa8.31□□□□□ -1.08
KDM5A-207ENST00000540838 PIK3CDO00329 1044 aa8.31□□□□□ -1.08
KDM5A-207ENST00000540838 RXRBP28702 533 aa8.31□□□□□ -1.08
KDM5A-207ENST00000540838 ZNF428Q96B54 188 aa8.31□□□□□ -1.08
KDM5A-207ENST00000540838 GNEQ9Y223 722 aaKnown RBP8.31□□□□□ -1.08
KDM5A-207ENST00000540838 COL16A1Q07092 1604 aaPredicted RBP8.3□□□□□ -1.08
KDM5A-207ENST00000540838 AHDC1Q5TGY3 1603 aaPredicted RBP8.3□□□□□ -1.08
KDM5A-207ENST00000540838 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.3□□□□□ -1.08
KDM5A-207ENST00000540838 PTPRUQ92729 1446 aa8.29□□□□□ -1.08
KDM5A-207ENST00000540838 CCDC27Q2M243 656 aa8.29□□□□□ -1.08
KDM5A-207ENST00000540838 AGBL1Q96MI9 1066 aa8.29□□□□□ -1.08
KDM5A-207ENST00000540838 SETD5Q9C0A6 1442 aa8.29□□□□□ -1.08
KDM5A-207ENST00000540838 FIGNL2A6NMB9 653 aa8.28□□□□□ -1.08
KDM5A-207ENST00000540838 ERVH48-1M5A8F1 160 aa8.28□□□□□ -1.08
KDM5A-207ENST00000540838 RELBQ01201 579 aa8.28□□□□□ -1.08
KDM5A-207ENST00000540838 Q6ZVU0 165 aa8.28□□□□□ -1.08
KDM5A-207ENST00000540838 PLEKHM2Q8IWE5 1019 aa8.28□□□□□ -1.08
KDM5A-207ENST00000540838 STK32AQ8WU08 396 aa8.28□□□□□ -1.08
KDM5A-207ENST00000540838 SETBP1Q9Y6X0 1596 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 METP08581 1390 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 USP17L3A6NCW0 530 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 USP17L4A6NCW7 530 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
KDM5A-207ENST00000540838 TMEM164Q5U3C3 297 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 B4GALNT3Q6L9W6 998 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 USP17L2Q6R6M4 530 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 USP17L1Q7RTZ2 530 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 ZNF784Q8NCA9 323 aaPredicted RBP8.27□□□□□ -1.09
KDM5A-207ENST00000540838 TRIM52Q96A61 297 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 LRP6O75581 1613 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 SHPRHQ149N8 1683 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 SOS2Q07890 1332 aaPredicted RBP8.27□□□□□ -1.09
KDM5A-207ENST00000540838 RPGRIP1LQ68CZ1 1315 aa8.27□□□□□ -1.09
KDM5A-207ENST00000540838 USP17L5A8MUK1 530 aa8.26□□□□□ -1.09
KDM5A-207ENST00000540838 RBM25P49756 843 aaKnown RBP8.26□□□□□ -1.09
KDM5A-207ENST00000540838 LCE2CQ5TA81 110 aa8.26□□□□□ -1.09
KDM5A-207ENST00000540838 ZNF395Q9H8N7 513 aaPredicted RBP8.26□□□□□ -1.09
KDM5A-207ENST00000540838 DNMT3LQ9UJW3 386 aa8.26□□□□□ -1.09
KDM5A-207ENST00000540838 MST1RQ04912 1400 aa8.26□□□□□ -1.09
KDM5A-207ENST00000540838 AFF2P51816 1311 aa8.26□□□□□ -1.09
KDM5A-207ENST00000540838 CDK12Q9NYV4 1490 aaPredicted RBP8.26□□□□□ -1.09
KDM5A-207ENST00000540838 ASXL1Q8IXJ9 1541 aa8.25□□□□□ -1.09
KDM5A-207ENST00000540838 TTLL8A6PVC2 850 aa8.25□□□□□ -1.09
KDM5A-207ENST00000540838 ESPNB1AK53 854 aa8.25□□□□□ -1.09
KDM5A-207ENST00000540838 RBM6P78332 1123 aaKnown RBP8.25□□□□□ -1.09
KDM5A-207ENST00000540838 PPARGC1BQ86YN6 1023 aaKnown RBP8.25□□□□□ -1.09
KDM5A-207ENST00000540838 IRF7Q92985 503 aa8.25□□□□□ -1.09
KDM5A-207ENST00000540838 QTRT2Q9H974 415 aaKnown RBP8.25□□□□□ -1.09
KDM5A-207ENST00000540838 NOVA2Q9UNW9 492 aaKnown RBP8.25□□□□□ -1.09
KDM5A-207ENST00000540838 ADGRL3Q9HAR2 1447 aa8.25□□□□□ -1.09
KDM5A-207ENST00000540838 SPHKAPQ2M3C7 1700 aa8.24□□□□□ -1.09
KDM5A-207ENST00000540838 XRN1Q8IZH2 1706 aaKnown RBP8.24□□□□□ -1.09
KDM5A-207ENST00000540838 FAM196BA6NMK8 535 aa8.24□□□□□ -1.09
KDM5A-207ENST00000540838 H3BM21 787 aa8.24□□□□□ -1.09
KDM5A-207ENST00000540838 ADD1P35611 737 aaKnown RBP8.24□□□□□ -1.09
KDM5A-207ENST00000540838 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
KDM5A-207ENST00000540838 NPAS3Q8IXF0 933 aa8.24□□□□□ -1.09
KDM5A-207ENST00000540838 NGLY1Q96IV0 654 aa8.24□□□□□ -1.09
KDM5A-207ENST00000540838 C8orf37Q96NL8 207 aa8.24□□□□□ -1.09
KDM5A-207ENST00000540838 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
KDM5A-207ENST00000540838 NRXN3Q9Y4C0 1643 aa8.23□□□□□ -1.09
KDM5A-207ENST00000540838 SPINT1O43278 529 aa8.23□□□□□ -1.09
KDM5A-207ENST00000540838 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.23□□□□□ -1.099e-6■■■■□ 24.9
KDM5A-207ENST00000540838 CRTC2Q53ET0 693 aaPredicted RBP8.23□□□□□ -1.09
KDM5A-207ENST00000540838 SEPT12Q8IYM1 358 aa8.23□□□□□ -1.09
KDM5A-207ENST00000540838 INSM2Q96T92 566 aaPredicted RBP8.23□□□□□ -1.09
KDM5A-207ENST00000540838 POLMQ9NP87 494 aaPredicted RBP8.23□□□□□ -1.09
KDM5A-207ENST00000540838 PNPLA6Q8IY17 1366 aa8.22□□□□□ -1.09
KDM5A-207ENST00000540838 NAIPQ13075 1403 aa8.22□□□□□ -1.09
KDM5A-207ENST00000540838 RRBP1Q9P2E9 1410 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms