RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 POTEJP0CG39 1038 aa18.93■□□□□ 0.62
MSRB3-209ENST00000540804 ALDH1B1P30837 517 aa18.93■□□□□ 0.62
MSRB3-209ENST00000540804 SYNE4Q8N205 404 aa18.93■□□□□ 0.62
MSRB3-209ENST00000540804 ZNF541Q9H0D2 1346 aa18.93■□□□□ 0.62
MSRB3-209ENST00000540804 CCDC184Q52MB2 194 aa18.92■□□□□ 0.62
MSRB3-209ENST00000540804 RPGRQ92834 1020 aaKnown RBP18.92■□□□□ 0.62
MSRB3-209ENST00000540804 CHPF2Q9P2E5 772 aa18.92■□□□□ 0.62
MSRB3-209ENST00000540804 SNED1Q8TER0 1413 aa18.91■□□□□ 0.62
MSRB3-209ENST00000540804 WDR90Q96KV7 1748 aa18.91■□□□□ 0.62
MSRB3-209ENST00000540804 APAF1O14727 1248 aa18.91■□□□□ 0.62
MSRB3-209ENST00000540804 PPP1R42Q7Z4L9 355 aa18.91■□□□□ 0.62
MSRB3-209ENST00000540804 DDX21Q9NR30 783 aaKnown RBP eCLIP18.91■□□□□ 0.62
MSRB3-209ENST00000540804 IBTKQ9P2D0 1353 aaPredicted RBP18.91■□□□□ 0.62
MSRB3-209ENST00000540804 HOXA10P31260 410 aaPredicted RBP18.9■□□□□ 0.62
MSRB3-209ENST00000540804 PARP10Q53GL7 1025 aa18.9■□□□□ 0.62
MSRB3-209ENST00000540804 RTKN2Q8IZC4 609 aa18.9■□□□□ 0.62
MSRB3-209ENST00000540804 UTP14AQ9BVJ6 771 aaKnown RBP18.9■□□□□ 0.62
MSRB3-209ENST00000540804 MBIPQ9NS73 344 aa18.9■□□□□ 0.62
MSRB3-209ENST00000540804 HCLS1P14317 486 aaPredicted RBP18.89■□□□□ 0.61
MSRB3-209ENST00000540804 IARSP41252 1262 aaKnown RBP18.89■□□□□ 0.61
MSRB3-209ENST00000540804 HDGFL1Q5TGJ6 251 aa18.89■□□□□ 0.61
MSRB3-209ENST00000540804 NLRP10Q86W26 655 aa18.89■□□□□ 0.61
MSRB3-209ENST00000540804 RBM17Q96I25 401 aaKnown RBP18.89■□□□□ 0.61
MSRB3-209ENST00000540804 RIC1Q4ADV7 1423 aa18.89■□□□□ 0.61
MSRB3-209ENST00000540804 CFAP44Q96MT7 982 aa18.88■□□□□ 0.61
MSRB3-209ENST00000540804 COL4A5P29400 1685 aa18.88■□□□□ 0.61
MSRB3-209ENST00000540804 DICER1Q9UPY3 1922 aaKnown RBP18.88■□□□□ 0.61
MSRB3-209ENST00000540804 PPEF1O14829 653 aaPredicted RBP18.87■□□□□ 0.61
MSRB3-209ENST00000540804 TCIRG1Q13488 830 aa18.87■□□□□ 0.61
MSRB3-209ENST00000540804 SLC10A5Q5PT55 438 aa18.87■□□□□ 0.61
MSRB3-209ENST00000540804 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
MSRB3-209ENST00000540804 KLRG1Q96E93 195 aa18.87■□□□□ 0.61
MSRB3-209ENST00000540804 NLRP3Q96P20 1036 aa18.87■□□□□ 0.61
MSRB3-209ENST00000540804 CRAMP1Q96RY5 1269 aa18.87■□□□□ 0.61
MSRB3-209ENST00000540804 ELL2O00472 640 aaPredicted RBP18.86■□□□□ 0.61
MSRB3-209ENST00000540804 ZNF853P0CG23 659 aa18.86■□□□□ 0.61
MSRB3-209ENST00000540804 FZD9O00144 591 aa18.85■□□□□ 0.61
MSRB3-209ENST00000540804 PSMD1Q99460 953 aa18.85■□□□□ 0.61
MSRB3-209ENST00000540804 TRMT112Q9UI30 125 aaKnown RBP18.85■□□□□ 0.61
MSRB3-209ENST00000540804 ABCC4O15439 1325 aa18.84■□□□□ 0.61
MSRB3-209ENST00000540804 ATP5J2-PTCD1G3V325 749 aa18.84■□□□□ 0.61
MSRB3-209ENST00000540804 HSP90AB3PQ58FF7 597 aa18.84■□□□□ 0.61
MSRB3-209ENST00000540804 CHADLQ6NUI6 762 aa18.84■□□□□ 0.61
MSRB3-209ENST00000540804 L3MBTL3Q96JM7 780 aaPredicted RBP18.84■□□□□ 0.61
MSRB3-209ENST00000540804 TAF1DQ9H5J8 278 aaPredicted RBP18.84■□□□□ 0.61
MSRB3-209ENST00000540804 RNF123Q5XPI4 1314 aa18.83■□□□□ 0.61
MSRB3-209ENST00000540804 PLBD2Q8NHP8 589 aa18.83■□□□□ 0.6
MSRB3-209ENST00000540804 DBF4Q9UBU7 674 aaPredicted RBP18.83■□□□□ 0.6
MSRB3-209ENST00000540804 HOXB7P09629 217 aa18.82■□□□□ 0.6
MSRB3-209ENST00000540804 EAPPQ56P03 285 aaPredicted RBP18.82■□□□□ 0.6
MSRB3-209ENST00000540804 RTL5Q5HYW3 569 aaPredicted RBP18.82■□□□□ 0.6
MSRB3-209ENST00000540804 CC2D2BQ6DHV5 1058 aa18.82■□□□□ 0.6
MSRB3-209ENST00000540804 ANKRD13DQ6ZTN6 518 aa18.82■□□□□ 0.6
MSRB3-209ENST00000540804 PHAXQ9H814 394 aaKnown RBP18.82■□□□□ 0.6
MSRB3-209ENST00000540804 SH3TC1Q8TE82 1336 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 LARGE2Q8N3Y3 721 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 C8orf58Q8NAV2 365 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 JDP2Q8WYK2 163 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 FAM89AQ96GI7 184 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 ISCA1Q9BUE6 129 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 IFT57Q9NWB7 429 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 ATP6V0A2Q9Y487 856 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 GJA3Q9Y6H8 435 aa18.81■□□□□ 0.6
MSRB3-209ENST00000540804 IQCA1LA6NCM1 817 aa18.8■□□□□ 0.6
MSRB3-209ENST00000540804 AOC3Q16853 763 aa18.8■□□□□ 0.6
MSRB3-209ENST00000540804 JMYQ8N9B5 988 aa18.8■□□□□ 0.6
MSRB3-209ENST00000540804 HACL1Q9UJ83 578 aa18.8■□□□□ 0.6
MSRB3-209ENST00000540804 EPHX2P34913 555 aa18.79■□□□□ 0.6
MSRB3-209ENST00000540804 GNAI1P63096 354 aa18.79■□□□□ 0.6
MSRB3-209ENST00000540804 HYPKQ9NX55 129 aa18.79■□□□□ 0.6
MSRB3-209ENST00000540804 ANKRD36CQ5JPF3 1778 aa18.78■□□□□ 0.6
MSRB3-209ENST00000540804 PPIP5K2O43314 1243 aa18.78■□□□□ 0.6
MSRB3-209ENST00000540804 LDHDQ86WU2 507 aa18.78■□□□□ 0.6
MSRB3-209ENST00000540804 GPC2Q8N158 579 aa18.78■□□□□ 0.6
MSRB3-209ENST00000540804 TSPYL6Q8N831 410 aa18.78■□□□□ 0.6
MSRB3-209ENST00000540804 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
MSRB3-209ENST00000540804 CLEC11AQ9Y240 323 aa18.78■□□□□ 0.6
MSRB3-209ENST00000540804 EIF6P56537 245 aaKnown RBP18.77■□□□□ 0.6
MSRB3-209ENST00000540804 DDX46Q7L014 1031 aaKnown RBP18.77■□□□□ 0.6
MSRB3-209ENST00000540804 COL4A1P02462 1669 aa18.76■□□□□ 0.59
MSRB3-209ENST00000540804 LAMB2P55268 1798 aa18.76■□□□□ 0.59
MSRB3-209ENST00000540804 BBOX1O75936 387 aa18.76■□□□□ 0.59
MSRB3-209ENST00000540804 GRAPQ13588 217 aa18.76■□□□□ 0.59
MSRB3-209ENST00000540804 IFFO2Q5TF58 517 aa18.76■□□□□ 0.59
MSRB3-209ENST00000540804 MAP1SQ66K74 1059 aaPredicted RBP18.76■□□□□ 0.59
MSRB3-209ENST00000540804 RIC3Q7Z5B4 369 aa18.76■□□□□ 0.59
MSRB3-209ENST00000540804 SP8Q8IXZ3 490 aa18.76■□□□□ 0.59
MSRB3-209ENST00000540804 NIM1KQ8IY84 436 aa18.76■□□□□ 0.59
MSRB3-209ENST00000540804 GRAPLQ8TC17 118 aaPredicted RBP18.76■□□□□ 0.59
MSRB3-209ENST00000540804 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
MSRB3-209ENST00000540804 MKRN1Q9UHC7 482 aaKnown RBP18.76■□□□□ 0.59
MSRB3-209ENST00000540804 PASKQ96RG2 1323 aa18.75■□□□□ 0.59
MSRB3-209ENST00000540804 ITGBL1O95965 494 aaPredicted RBP18.75■□□□□ 0.59
MSRB3-209ENST00000540804 EPS15P42566 896 aa18.75■□□□□ 0.59
MSRB3-209ENST00000540804 SCNN1DP51172 638 aa18.75■□□□□ 0.59
MSRB3-209ENST00000540804 GRIPAP1Q4V328 841 aa18.75■□□□□ 0.59
MSRB3-209ENST00000540804 DPP8Q6V1X1 898 aaPredicted RBP18.75■□□□□ 0.59
MSRB3-209ENST00000540804 MPNDQ8N594 471 aa18.75■□□□□ 0.59
MSRB3-209ENST00000540804 CELF1Q92879 486 aaKnown RBP18.75■□□□□ 0.59
MSRB3-209ENST00000540804 MYD88Q99836 296 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms