RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 IFIT1P09914 478 aaKnown RBP11.74□□□□□ -0.53
PHC1-208ENST00000540574 SLFNL1Q499Z3 407 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 CREB3L3Q68CJ9 461 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 TNMDQ9H2S6 317 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 TTC12Q9H892 705 aaPredicted RBP11.74□□□□□ -0.53
PHC1-208ENST00000540574 DDX21Q9NR30 783 aaKnown RBP eCLIP11.74□□□□□ -0.53
PHC1-208ENST00000540574 FSD2A1L4K1 749 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 HIP1O00291 1037 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 NFXL1Q6ZNB6 911 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 SDF4Q9BRK5 362 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 CCDC39Q9UFE4 941 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 TMEM131LA2VDJ0 1609 aa11.74□□□□□ -0.53
PHC1-208ENST00000540574 MTMR7Q9Y216 660 aa11.73□□□□□ -0.53
PHC1-208ENST00000540574 CHGBP05060 677 aa11.73□□□□□ -0.53
PHC1-208ENST00000540574 CLCN1P35523 988 aa11.73□□□□□ -0.53
PHC1-208ENST00000540574 ME1P48163 572 aa11.73□□□□□ -0.53
PHC1-208ENST00000540574 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.73□□□□□ -0.53
PHC1-208ENST00000540574 LARGE1O95461 756 aa11.73□□□□□ -0.53
PHC1-208ENST00000540574 C17orf53Q8N3J3 647 aaPredicted RBP11.73□□□□□ -0.53
PHC1-208ENST00000540574 A0A0D9SFI3 127 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 CCDC144CPQ8IYA2 1237 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 PDCP20941 246 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 ANAPC15P60006 121 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 TRDNQ13061 729 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 MED14O60244 1454 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 ALDH1L1O75891 902 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 HSPA4P34932 840 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 ZDHHC9Q9Y397 364 aa11.72□□□□□ -0.53
PHC1-208ENST00000540574 ADCY5O95622 1261 aa11.71□□□□□ -0.53
PHC1-208ENST00000540574 F13A1P00488 732 aa11.71□□□□□ -0.53
PHC1-208ENST00000540574 CCDC158Q5M9N0 1113 aa11.71□□□□□ -0.53
PHC1-208ENST00000540574 NUP62CLQ9H1M0 184 aa11.71□□□□□ -0.53
PHC1-208ENST00000540574 ERBB4Q15303 1308 aa11.71□□□□□ -0.53
PHC1-208ENST00000540574 RAD50Q92878 1312 aa11.71□□□□□ -0.53
PHC1-208ENST00000540574 NUTM2BA6NNL0 878 aaPredicted RBP11.71□□□□□ -0.53
PHC1-208ENST00000540574 NUTM2EB1AL46 878 aaPredicted RBP11.71□□□□□ -0.53
PHC1-208ENST00000540574 TULP1O00294 542 aaPredicted RBP11.71□□□□□ -0.53
PHC1-208ENST00000540574 CCDC73Q6ZRK6 1079 aa11.71□□□□□ -0.53
PHC1-208ENST00000540574 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
PHC1-208ENST00000540574 NUTM2AQ8IVF1 878 aaPredicted RBP11.71□□□□□ -0.53
PHC1-208ENST00000540574 HELBQ8NG08 1087 aaPredicted RBP11.71□□□□□ -0.53
PHC1-208ENST00000540574 CCDC171Q6TFL3 1326 aa11.71□□□□□ -0.54
PHC1-208ENST00000540574 CRB1P82279 1406 aa11.71□□□□□ -0.54
PHC1-208ENST00000540574 ATP10DQ9P241 1426 aa11.71□□□□□ -0.54
PHC1-208ENST00000540574 CCDC183Q5T5S1 534 aa11.71□□□□□ -0.54
PHC1-208ENST00000540574 ISM2Q6H9L7 571 aa11.71□□□□□ -0.54
PHC1-208ENST00000540574 Q6ZUG5 572 aa11.71□□□□□ -0.54
PHC1-208ENST00000540574 ZSCAN31Q96LW9 406 aaPredicted RBP11.71□□□□□ -0.54
PHC1-208ENST00000540574 NEK1Q96PY6 1258 aa11.71□□□□□ -0.54
PHC1-208ENST00000540574 GOLGA6L6A8MZA4 724 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 FAM89AQ96GI7 184 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 KIF3AQ9Y496 699 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 UQCRHLA0A096LP55 91 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 BRD1O95696 1058 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 POLR3DP05423 398 aaPredicted RBP11.7□□□□□ -0.54
PHC1-208ENST00000540574 UQCRHP07919 91 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 CCDC192P0DO97 292 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 METTL24Q5JXM2 366 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 KIF6Q6ZMV9 814 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 IQSEC3Q9UPP2 1182 aaPredicted RBP11.7□□□□□ -0.54
PHC1-208ENST00000540574 ADAMTS13Q76LX8 1427 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 PTPRUQ92729 1446 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 JAK2O60674 1132 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 GCKRQ14397 625 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 ME3Q16798 604 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 TTLL7Q6ZT98 887 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 FILIP1Q7Z7B0 1213 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 ARHGEF25Q86VW2 580 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 OSBPL3Q9H4L5 887 aa11.7□□□□□ -0.54
PHC1-208ENST00000540574 ADAMTS2O95450 1211 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 NCOA5Q9HCD5 579 aaKnown RBP11.69□□□□□ -0.54
PHC1-208ENST00000540574 EPHA10Q5JZY3 1008 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 BICDL1Q6ZP65 573 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 PI4K2BQ8TCG2 481 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 TMOD3Q9NYL9 352 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 APOBRQ0VD83 1088 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 ANKRD1Q15327 319 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 ERCC4Q92889 916 aaPredicted RBP11.69□□□□□ -0.54
PHC1-208ENST00000540574 SLC52A2Q9HAB3 445 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 DACT1Q9NYF0 836 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
PHC1-208ENST00000540574 SLC27A2O14975 620 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 RXRAP19793 462 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 SYNE3Q6ZMZ3 975 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 PIBF1Q8WXW3 757 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 CWC25Q9NXE8 425 aaPredicted RBP11.68□□□□□ -0.54
PHC1-208ENST00000540574 NEURL1BA8MQ27 555 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 SASH1O94885 1247 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 UBE2HP62256 183 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 MAP3K11Q16584 847 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 CDC37L1Q7L3B6 337 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 ZNF589Q86UQ0 364 aaPredicted RBP11.68□□□□□ -0.54
PHC1-208ENST00000540574 ZCRB1Q8TBF4 217 aaKnown RBP11.68□□□□□ -0.54
PHC1-208ENST00000540574 SH2B1Q9NRF2 756 aaPredicted RBP11.68□□□□□ -0.54
PHC1-208ENST00000540574 TTC41PQ6P2S7 1318 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 KINO60870 393 aaKnown RBP11.68□□□□□ -0.54
PHC1-208ENST00000540574 LSG1Q9H089 658 aaKnown RBP11.68□□□□□ -0.54
PHC1-208ENST00000540574 TBC1D2BQ9UPU7 963 aa11.68□□□□□ -0.54
PHC1-208ENST00000540574 BIN1O00499 593 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms