RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 PROSER3Q2NL68 480 aa21.83■■□□□ 1.09
PSMD3-204ENST00000540504 CRAMP1Q96RY5 1269 aa21.83■■□□□ 1.09
PSMD3-204ENST00000540504 PSMD1Q99460 953 aa21.83■■□□□ 1.09
PSMD3-204ENST00000540504 DDX21Q9NR30 783 aaKnown RBP eCLIP21.83■■□□□ 1.09
PSMD3-204ENST00000540504 ZNF277Q9NRM2 450 aaPredicted RBP21.83■■□□□ 1.09
PSMD3-204ENST00000540504 SNED1Q8TER0 1413 aa21.82■■□□□ 1.08
PSMD3-204ENST00000540504 HOXB7P09629 217 aa21.82■■□□□ 1.08
PSMD3-204ENST00000540504 OLFM4Q6UX06 510 aa21.82■■□□□ 1.08
PSMD3-204ENST00000540504 RBM17Q96I25 401 aaKnown RBP21.82■■□□□ 1.08
PSMD3-204ENST00000540504 L3MBTL3Q96JM7 780 aaPredicted RBP21.82■■□□□ 1.08
PSMD3-204ENST00000540504 NLRP3Q96P20 1036 aa21.82■■□□□ 1.08
PSMD3-204ENST00000540504 SCN4AP35499 1836 aa21.82■■□□□ 1.08
PSMD3-204ENST00000540504 ANKRD36CQ5JPF3 1778 aa21.82■■□□□ 1.08
PSMD3-204ENST00000540504 ANXA1P04083 346 aa21.81■■□□□ 1.08
PSMD3-204ENST00000540504 IARSP41252 1262 aaKnown RBP21.81■■□□□ 1.08
PSMD3-204ENST00000540504 HTRA3P83110 453 aa21.81■■□□□ 1.08
PSMD3-204ENST00000540504 SLC10A5Q5PT55 438 aa21.81■■□□□ 1.08
PSMD3-204ENST00000540504 COPS6Q7L5N1 327 aa21.81■■□□□ 1.08
PSMD3-204ENST00000540504 SYNE4Q8N205 404 aa21.81■■□□□ 1.08
PSMD3-204ENST00000540504 UTP14AQ9BVJ6 771 aaKnown RBP21.81■■□□□ 1.08
PSMD3-204ENST00000540504 LAS1LQ9Y4W2 734 aaKnown RBP21.81■■□□□ 1.08
PSMD3-204ENST00000540504 JMYQ8N9B5 988 aa21.8■■□□□ 1.08
PSMD3-204ENST00000540504 CHADLQ6NUI6 762 aa21.79■■□□□ 1.08
PSMD3-204ENST00000540504 XAGE3Q8WTP9 111 aa21.79■■□□□ 1.08
PSMD3-204ENST00000540504 NECTIN2Q92692 538 aa21.79■■□□□ 1.08
PSMD3-204ENST00000540504 CFAP44Q96MT7 982 aa21.79■■□□□ 1.08
PSMD3-204ENST00000540504 FZD9O00144 591 aa21.78■■□□□ 1.08
PSMD3-204ENST00000540504 AIMP1Q12904 312 aaKnown RBP21.78■■□□□ 1.08
PSMD3-204ENST00000540504 KRT24Q2M2I5 525 aa21.78■■□□□ 1.08
PSMD3-204ENST00000540504 JDP2Q8WYK2 163 aa21.78■■□□□ 1.08
PSMD3-204ENST00000540504 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.08
PSMD3-204ENST00000540504 TCIRG1Q13488 830 aa21.77■■□□□ 1.08
PSMD3-204ENST00000540504 IFFO2Q5TF58 517 aa21.77■■□□□ 1.08
PSMD3-204ENST00000540504 HDGFL1Q5TGJ6 251 aa21.77■■□□□ 1.08
PSMD3-204ENST00000540504 NLRP10Q86W26 655 aa21.77■■□□□ 1.08
PSMD3-204ENST00000540504 TMX4Q9H1E5 349 aaPredicted RBP21.77■■□□□ 1.08
PSMD3-204ENST00000540504 ZNF541Q9H0D2 1346 aa21.77■■□□□ 1.07
PSMD3-204ENST00000540504 TAF1DQ9H5J8 278 aaPredicted RBP21.76■■□□□ 1.07
PSMD3-204ENST00000540504 DBF4Q9UBU7 674 aaPredicted RBP21.76■■□□□ 1.07
PSMD3-204ENST00000540504 CALD1Q05682 793 aaKnown RBP21.75■■□□□ 1.07
PSMD3-204ENST00000540504 C3orf67Q6ZVT6 689 aa21.75■■□□□ 1.07
PSMD3-204ENST00000540504 LDHDQ86WU2 507 aa21.75■■□□□ 1.07
PSMD3-204ENST00000540504 CHPF2Q9P2E5 772 aa21.75■■□□□ 1.07
PSMD3-204ENST00000540504 GPC2Q8N158 579 aa21.74■■□□□ 1.07
PSMD3-204ENST00000540504 PLBD2Q8NHP8 589 aa21.74■■□□□ 1.07
PSMD3-204ENST00000540504 VPS33BQ9H267 617 aa21.74■■□□□ 1.07
PSMD3-204ENST00000540504 HACL1Q9UJ83 578 aa21.74■■□□□ 1.07
PSMD3-204ENST00000540504 EIF6P56537 245 aaKnown RBP21.73■■□□□ 1.07
PSMD3-204ENST00000540504 HYPKQ9NX55 129 aa21.73■■□□□ 1.07
PSMD3-204ENST00000540504 TRMT112Q9UI30 125 aaKnown RBP21.73■■□□□ 1.07
PSMD3-204ENST00000540504 ATP6V0A2Q9Y487 856 aa21.73■■□□□ 1.07
PSMD3-204ENST00000540504 SH3TC1Q8TE82 1336 aa21.73■■□□□ 1.07
PSMD3-204ENST00000540504 LAMB2P55268 1798 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 BBOX1O75936 387 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 ZNF853P0CG23 659 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 POTEIP0CG38 1075 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 POTEJP0CG39 1038 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 DUSP27Q5VZP5 1158 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 ANKRD13DQ6ZTN6 518 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 MBIPQ9NS73 344 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 IFT57Q9NWB7 429 aa21.72■■□□□ 1.07
PSMD3-204ENST00000540504 APAF1O14727 1248 aa21.71■■□□□ 1.07
PSMD3-204ENST00000540504 GNAI1P63096 354 aa21.71■■□□□ 1.07
PSMD3-204ENST00000540504 PNMA8AQ86V59 439 aaPredicted RBP21.71■■□□□ 1.07
PSMD3-204ENST00000540504 LARGE2Q8N3Y3 721 aa21.71■■□□□ 1.07
PSMD3-204ENST00000540504 CREBZFQ9NS37 354 aa21.71■■□□□ 1.07
PSMD3-204ENST00000540504 ABCC4O15439 1325 aa21.71■■□□□ 1.07
PSMD3-204ENST00000540504 TCERG1O14776 1098 aaKnown RBP21.7■■□□□ 1.06
PSMD3-204ENST00000540504 EPHX2P34913 555 aa21.7■■□□□ 1.06
PSMD3-204ENST00000540504 SUPT20HQ8NEM7 779 aa21.7■■□□□ 1.06
PSMD3-204ENST00000540504 HCLS1P14317 486 aaPredicted RBP21.69■■□□□ 1.06
PSMD3-204ENST00000540504 DDX46Q7L014 1031 aaKnown RBP21.69■■□□□ 1.06
PSMD3-204ENST00000540504 SP8Q8IXZ3 490 aa21.69■■□□□ 1.06
PSMD3-204ENST00000540504 COL4A5P29400 1685 aa21.69■■□□□ 1.06
PSMD3-204ENST00000540504 EAPPQ56P03 285 aaPredicted RBP21.68■■□□□ 1.06
PSMD3-204ENST00000540504 NIM1KQ8IY84 436 aa21.68■■□□□ 1.06
PSMD3-204ENST00000540504 ISCA1Q9BUE6 129 aa21.68■■□□□ 1.06
PSMD3-204ENST00000540504 RTFDC1Q9BY42 306 aaPredicted RBP21.68■■□□□ 1.06
PSMD3-204ENST00000540504 CHMP4AQ9BY43 222 aa21.68■■□□□ 1.06
PSMD3-204ENST00000540504 ADAMTSL1Q8N6G6 1762 aa21.68■■□□□ 1.06
PSMD3-204ENST00000540504 PASKQ96RG2 1323 aa21.67■■□□□ 1.06
PSMD3-204ENST00000540504 GRAPQ13588 217 aa21.67■■□□□ 1.06
PSMD3-204ENST00000540504 TMC4Q7Z404 712 aa21.67■■□□□ 1.06
PSMD3-204ENST00000540504 GRAPLQ8TC17 118 aaPredicted RBP21.67■■□□□ 1.06
PSMD3-204ENST00000540504 PPIP5K2O43314 1243 aa21.66■■□□□ 1.06
PSMD3-204ENST00000540504 TRIM28Q13263 835 aaKnown RBP21.66■■□□□ 1.06
PSMD3-204ENST00000540504 CLEC11AQ9Y240 323 aa21.66■■□□□ 1.06
PSMD3-204ENST00000540504 GJA3Q9Y6H8 435 aa21.66■■□□□ 1.06
PSMD3-204ENST00000540504 ITGBL1O95965 494 aaPredicted RBP21.65■■□□□ 1.06
PSMD3-204ENST00000540504 LMOD1P29536 600 aaPredicted RBP21.65■■□□□ 1.06
PSMD3-204ENST00000540504 DPP8Q6V1X1 898 aaPredicted RBP21.65■■□□□ 1.06
PSMD3-204ENST00000540504 MPNDQ8N594 471 aa21.65■■□□□ 1.06
PSMD3-204ENST00000540504 DDX60Q8IY21 1712 aaKnown RBP21.65■■□□□ 1.06
PSMD3-204ENST00000540504 AOC3Q16853 763 aa21.64■■□□□ 1.05
PSMD3-204ENST00000540504 SLC51AQ86UW1 340 aa21.64■■□□□ 1.05
PSMD3-204ENST00000540504 ATP5J2-PTCD1G3V325 749 aa21.63■■□□□ 1.05
PSMD3-204ENST00000540504 ZEB1P37275 1124 aaPredicted RBP21.63■■□□□ 1.05
PSMD3-204ENST00000540504 GOLGA2Q08379 1002 aa21.63■■□□□ 1.05
PSMD3-204ENST00000540504 SF3B3Q15393 1217 aaKnown RBP21.63■■□□□ 1.05
PSMD3-204ENST00000540504 RIC3Q7Z5B4 369 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms