RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 UTP14AQ9BVJ6 771 aaKnown RBP16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 PXDNLA1KZ92 1463 aa16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 LAMB2P55268 1798 aa16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 DLEC1Q9Y238 1755 aa16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 BRCA1P38398 1863 aaKnown RBP16.2■□□□□ 0.18
TSPAN9-207ENST00000539631 PTPRCP08575 1304 aa16.19■□□□□ 0.18
TSPAN9-207ENST00000539631 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
TSPAN9-207ENST00000539631 ABCC12Q96J65 1359 aa16.19■□□□□ 0.18
TSPAN9-207ENST00000539631 BRPF1P55201 1214 aaPredicted RBP16.19■□□□□ 0.18
TSPAN9-207ENST00000539631 NEXNQ0ZGT2 675 aa16.19■□□□□ 0.18
TSPAN9-207ENST00000539631 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
TSPAN9-207ENST00000539631 NOB1Q9ULX3 412 aaKnown RBP16.19■□□□□ 0.18
TSPAN9-207ENST00000539631 A0A0G2JLW4 131 aa16.18■□□□□ 0.18
TSPAN9-207ENST00000539631 DPEP1P16444 411 aa16.18■□□□□ 0.18
TSPAN9-207ENST00000539631 TGFB2P61812 414 aa16.18■□□□□ 0.18
TSPAN9-207ENST00000539631 CWF19L2Q2TBE0 894 aaKnown RBP16.18■□□□□ 0.18
TSPAN9-207ENST00000539631 SYNE4Q8N205 404 aa16.18■□□□□ 0.18
TSPAN9-207ENST00000539631 BRIP1Q9BX63 1249 aa16.18■□□□□ 0.18
TSPAN9-207ENST00000539631 TRMT112Q9UI30 125 aaKnown RBP16.18■□□□□ 0.18
TSPAN9-207ENST00000539631 CACNA1SQ13698 1873 aa16.18■□□□□ 0.18
TSPAN9-207ENST00000539631 NEURL1BA8MQ27 555 aa16.17■□□□□ 0.18
TSPAN9-207ENST00000539631 CHRNA5P30532 468 aa16.17■□□□□ 0.18
TSPAN9-207ENST00000539631 SLC4A10Q6U841 1118 aa16.17■□□□□ 0.18
TSPAN9-207ENST00000539631 CCDC191Q8NCU4 936 aa16.17■□□□□ 0.18
TSPAN9-207ENST00000539631 CWC25Q9NXE8 425 aaPredicted RBP16.17■□□□□ 0.18
TSPAN9-207ENST00000539631 KCNA3P22001 575 aa16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 RTL5Q5HYW3 569 aaPredicted RBP16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 BEND3Q5T5X7 828 aa16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 C2CD5Q86YS7 1000 aa16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 LINS1Q8NG48 757 aa16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 FAM89AQ96GI7 184 aa16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 RNF123Q5XPI4 1314 aa16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 SH3TC1Q8TE82 1336 aa16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 KIF16BQ96L93 1317 aa16.16■□□□□ 0.18
TSPAN9-207ENST00000539631 PDE6BP35913 854 aa16.15■□□□□ 0.18
TSPAN9-207ENST00000539631 RIC1Q4ADV7 1423 aa16.15■□□□□ 0.18
TSPAN9-207ENST00000539631 JARID2Q92833 1246 aaPredicted RBP16.15■□□□□ 0.18
TSPAN9-207ENST00000539631 WWC3Q9ULE0 1092 aa16.15■□□□□ 0.18
TSPAN9-207ENST00000539631 H0YIN7 160 aa16.14■□□□□ 0.17
TSPAN9-207ENST00000539631 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
TSPAN9-207ENST00000539631 GCKRQ14397 625 aa16.14■□□□□ 0.17
TSPAN9-207ENST00000539631 SLC10A5Q5PT55 438 aa16.14■□□□□ 0.17
TSPAN9-207ENST00000539631 ZBTB38Q8NAP3 1195 aaPredicted RBP16.14■□□□□ 0.17
TSPAN9-207ENST00000539631 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
TSPAN9-207ENST00000539631 PCCAP05165 728 aaPredicted RBP16.13■□□□□ 0.17
TSPAN9-207ENST00000539631 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
TSPAN9-207ENST00000539631 API5Q9BZZ5 524 aaKnown RBP16.13■□□□□ 0.17
TSPAN9-207ENST00000539631 TNNQ9UQP3 1299 aa16.13■□□□□ 0.17
TSPAN9-207ENST00000539631 MYH3P11055 1940 aa16.13■□□□□ 0.17
TSPAN9-207ENST00000539631 KLRG2A4D1S0 409 aaPredicted RBP16.12■□□□□ 0.17
TSPAN9-207ENST00000539631 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
TSPAN9-207ENST00000539631 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
TSPAN9-207ENST00000539631 SRCIN1Q9C0H9 1055 aa16.12■□□□□ 0.17
TSPAN9-207ENST00000539631 RCAN3Q9UKA8 241 aa16.12■□□□□ 0.17
TSPAN9-207ENST00000539631 PDZRN3Q9UPQ7 1066 aa16.12■□□□□ 0.17
TSPAN9-207ENST00000539631 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
TSPAN9-207ENST00000539631 H7C1W4 665 aa16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 IRS4O14654 1257 aaPredicted RBP16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 IPO8O15397 1037 aaKnown RBP16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 ALDH1L1O75891 902 aa16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 SRGNP10124 158 aa16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 PELP1Q8IZL8 1130 aaKnown RBP16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 ZNF622Q969S3 477 aaKnown RBP eCLIP16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 NLRP3Q96P20 1036 aa16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 PIM2Q9P1W9 311 aa16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 TAF1P21675 1872 aa16.11■□□□□ 0.17
TSPAN9-207ENST00000539631 SLX4Q8IY92 1834 aa16.1■□□□□ 0.17
TSPAN9-207ENST00000539631 TRIM27P14373 513 aa16.1■□□□□ 0.17
TSPAN9-207ENST00000539631 CASP7P55210 303 aa16.1■□□□□ 0.17
TSPAN9-207ENST00000539631 CRY2Q49AN0 593 aa16.1■□□□□ 0.17
TSPAN9-207ENST00000539631 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
TSPAN9-207ENST00000539631 ATF7IPQ6VMQ6 1270 aa16.1■□□□□ 0.17
TSPAN9-207ENST00000539631 MASTLQ96GX5 879 aa16.1■□□□□ 0.17
TSPAN9-207ENST00000539631 CDHR2Q9BYE9 1310 aa16.1■□□□□ 0.17
TSPAN9-207ENST00000539631 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
TSPAN9-207ENST00000539631 STYK1Q6J9G0 422 aa16.09■□□□□ 0.17
TSPAN9-207ENST00000539631 UBE3BQ7Z3V4 1068 aa16.09■□□□□ 0.17
TSPAN9-207ENST00000539631 BCS1LQ9Y276 419 aa16.09■□□□□ 0.17
TSPAN9-207ENST00000539631 ABCC4O15439 1325 aa16.09■□□□□ 0.17
TSPAN9-207ENST00000539631 GRM8O00222 908 aa16.08■□□□□ 0.16
TSPAN9-207ENST00000539631 NPR1P16066 1061 aa16.08■□□□□ 0.16
TSPAN9-207ENST00000539631 GPR162Q16538 588 aa16.08■□□□□ 0.16
TSPAN9-207ENST00000539631 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
TSPAN9-207ENST00000539631 CLUAP1Q96AJ1 413 aa16.08■□□□□ 0.16
TSPAN9-207ENST00000539631 PDE8AO60658 829 aa16.07■□□□□ 0.16
TSPAN9-207ENST00000539631 CCT4P50991 539 aaKnown RBP16.07■□□□□ 0.16
TSPAN9-207ENST00000539631 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
TSPAN9-207ENST00000539631 DALRD3Q5D0E6 543 aaKnown RBP16.07■□□□□ 0.16
TSPAN9-207ENST00000539631 TTLL6Q8N841 843 aa16.07■□□□□ 0.16
TSPAN9-207ENST00000539631 C9orf78Q9NZ63 289 aaPredicted RBP16.07■□□□□ 0.16
TSPAN9-207ENST00000539631 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
TSPAN9-207ENST00000539631 HOXA10P31260 410 aaPredicted RBP16.06■□□□□ 0.16
TSPAN9-207ENST00000539631 INTS3Q68E01 1043 aaKnown RBP16.06■□□□□ 0.16
TSPAN9-207ENST00000539631 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
TSPAN9-207ENST00000539631 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
TSPAN9-207ENST00000539631 COL4A1P02462 1669 aa16.05■□□□□ 0.16
TSPAN9-207ENST00000539631 UTYO14607 1347 aa16.05■□□□□ 0.16
TSPAN9-207ENST00000539631 NBPF7P0C2Y1 421 aaPredicted RBP16.05■□□□□ 0.16
TSPAN9-207ENST00000539631 CCDC85AQ96PX6 553 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms