RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 DDX21Q9NR30 783 aaKnown RBP eCLIP15.08■□□□□ 0
SFSWAP-208ENST00000539506 ECHDC1Q9NTX5 307 aa15.08■□□□□ 0
SFSWAP-208ENST00000539506 HYPKQ9NX55 129 aa15.08■□□□□ 0
SFSWAP-208ENST00000539506 ADAMTS7Q9UKP4 1686 aa15.08■□□□□ 0
SFSWAP-208ENST00000539506 A0A0U1RQG5 324 aaPredicted RBP15.08■□□□□ 0
SFSWAP-208ENST00000539506 PIP4K2AP48426 406 aaPredicted RBP15.08■□□□□ 0
SFSWAP-208ENST00000539506 ZNF790Q6PG37 636 aa15.08■□□□□ 0
SFSWAP-208ENST00000539506 PROSER2Q86WR7 435 aaPredicted RBP15.08■□□□□ 0
SFSWAP-208ENST00000539506 NFATC2IPQ8NCF5 419 aa15.08■□□□□ 0
SFSWAP-208ENST00000539506 ADAMTSL3P82987 1691 aa15.07■□□□□ 0
SFSWAP-208ENST00000539506 MYL6BP14649 208 aa15.07■□□□□ 0
SFSWAP-208ENST00000539506 EPHA10Q5JZY3 1008 aa15.07■□□□□ 0
SFSWAP-208ENST00000539506 AACSQ86V21 672 aa15.07■□□□□ 0
SFSWAP-208ENST00000539506 CHMP4AQ9BY43 222 aa15.07■□□□□ 0
SFSWAP-208ENST00000539506 HS1BP3Q53T59 392 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 CCDC8Q9H0W5 538 aaPredicted RBP15.06■□□□□ 0
SFSWAP-208ENST00000539506 MBD3O95983 291 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 CSPP1Q1MSJ5 1256 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 C5P01031 1676 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 NOLC1Q14978 699 aaKnown RBP eCLIP15.06■□□□□ 0
SFSWAP-208ENST00000539506 FAM173BQ6P4H8 233 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 LRP10Q7Z4F1 713 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 CABLES1Q8TDN4 633 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 FAM227BQ96M60 508 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 SIL1Q9H173 461 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 SLC52A2Q9HAB3 445 aa15.06■□□□□ 0
SFSWAP-208ENST00000539506 IFIT2P09913 472 aaKnown RBP15.05■□□□□ -0
SFSWAP-208ENST00000539506 CASTP20810 708 aaKnown RBP15.05■□□□□ -0
SFSWAP-208ENST00000539506 NPHP3Q7Z494 1330 aa15.05■□□□□ -0
SFSWAP-208ENST00000539506 DYNC1I1O14576 645 aa15.05■□□□□ -0
SFSWAP-208ENST00000539506 PRPF40BQ6NWY9 871 aaKnown RBP15.05■□□□□ -0
SFSWAP-208ENST00000539506 ZNF496Q96IT1 587 aaPredicted RBP15.05■□□□□ -0
SFSWAP-208ENST00000539506 DIAPH3Q9NSV4 1193 aa15.05■□□□□ -0
SFSWAP-208ENST00000539506 NLRP2Q9NX02 1062 aa15.05■□□□□ -0
SFSWAP-208ENST00000539506 MEGF6O75095 1541 aa15.05■□□□□ -0
SFSWAP-208ENST00000539506 PHKG2P15735 406 aa15.04■□□□□ -0
SFSWAP-208ENST00000539506 CAMK4Q16566 473 aa15.04■□□□□ -0
SFSWAP-208ENST00000539506 XAGE3Q8WTP9 111 aa15.04■□□□□ -0
SFSWAP-208ENST00000539506 USP16Q9Y5T5 823 aa15.04■□□□□ -0
SFSWAP-208ENST00000539506 NEURL1BA8MQ27 555 aa15.04■□□□□ -0
SFSWAP-208ENST00000539506 ST3GAL1Q11201 340 aa15.04■□□□□ -0
SFSWAP-208ENST00000539506 COPS6Q7L5N1 327 aa15.04■□□□□ -0
SFSWAP-208ENST00000539506 ZNF710Q8N1W2 664 aa15.04■□□□□ -0
SFSWAP-208ENST00000539506 AP5Z1O43299 807 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 RIC3Q7Z5B4 369 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 FERMT3Q86UX7 667 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 NECTIN1Q15223 517 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 C19orf44Q9H6X5 657 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 LIMCH1Q9UPQ0 1083 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 TAF6LQ9Y6J9 622 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 ALS2Q96Q42 1657 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 PPP4R3BQ5MIZ7 849 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 KCNB2Q92953 911 aa15.03■□□□□ -0
SFSWAP-208ENST00000539506 SYT1P21579 422 aa15.02■□□□□ -0
SFSWAP-208ENST00000539506 GCKRQ14397 625 aa15.02■□□□□ -0
SFSWAP-208ENST00000539506 EVI5LQ96CN4 794 aa15.02■□□□□ -0
SFSWAP-208ENST00000539506 MST1RQ04912 1400 aa15.02■□□□□ -0
SFSWAP-208ENST00000539506 TCHHQ07283 1943 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 CYP27B1O15528 508 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 NMIQ13287 307 aaPredicted RBP15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 CHRNA2Q15822 529 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 ATP2B3Q16720 1220 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 ERC1Q8IUD2 1116 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 RAPGEF4Q8WZA2 1011 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 TCEANC2Q96MN5 208 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 JAKMIP1Q96N16 626 aaKnown RBP15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 MYD88Q99836 296 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 BOLA2Q9H3K6 86 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 PYCARDQ9ULZ3 195 aa15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 WDR33Q9C0J8 1336 aaKnown RBP15.02□□□□□ -0.01
SFSWAP-208ENST00000539506 CCDC83Q8IWF9 413 aa15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 EDC3Q96F86 508 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 A0A0D9SFI3 127 aa15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 VPS37CA5D8V6 355 aaPredicted RBP15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 DDX58O95786 925 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 DNM1Q05193 864 aaKnown RBP15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 G3BP1Q13283 466 aaKnown RBP eCLIP15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 NECAB1Q8N987 351 aa15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 SYAP1Q96A49 352 aaPredicted RBP15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 ZSWIM6Q9HCJ5 1215 aa15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 CHGBP05060 677 aa15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 CCDC171Q6TFL3 1326 aa15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 SCN11AQ9UI33 1791 aa15.01□□□□□ -0.01
SFSWAP-208ENST00000539506 ZSCAN22P10073 491 aaPredicted RBP15□□□□□ -0.01
SFSWAP-208ENST00000539506 LARP1Q6PKG0 1096 aaKnown RBP15□□□□□ -0.01
SFSWAP-208ENST00000539506 METTL22Q9BUU2 404 aaPredicted RBP15□□□□□ -0.01
SFSWAP-208ENST00000539506 PDRG1Q9NUG6 133 aa15□□□□□ -0.01
SFSWAP-208ENST00000539506 RBM8AQ9Y5S9 174 aaKnown RBP15□□□□□ -0.01
SFSWAP-208ENST00000539506 RUFY2Q8WXA3 655 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 MAP4K1Q92918 833 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 NDUFB9Q9Y6M9 179 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 COL18A1P39060 1754 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 STX6O43752 255 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 TERF1P54274 439 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 ME3Q16798 604 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 CREB3L3Q68CJ9 461 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 ZNF589Q86UQ0 364 aaPredicted RBP14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 MYRIPQ8NFW9 859 aa14.99□□□□□ -0.01
SFSWAP-208ENST00000539506 GPATCH3Q96I76 525 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms