RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 COL4A5P29400 1685 aa10.74□□□□□ -0.69
CD4-209ENST00000539492 HOXA10P31260 410 aaPredicted RBP10.74□□□□□ -0.69
CD4-209ENST00000539492 NFE2L2Q16236 605 aa10.74□□□□□ -0.69
CD4-209ENST00000539492 GRIPAP1Q4V328 841 aa10.74□□□□□ -0.69
CD4-209ENST00000539492 TTLL7Q6ZT98 887 aa10.74□□□□□ -0.69
CD4-209ENST00000539492 RPGRQ92834 1020 aaKnown RBP10.74□□□□□ -0.69
CD4-209ENST00000539492 PLEKHF1Q96S99 279 aa10.74□□□□□ -0.69
CD4-209ENST00000539492 CLEC11AQ9Y240 323 aa10.74□□□□□ -0.69
CD4-209ENST00000539492 RRP7AQ9Y3A4 280 aaKnown RBP10.74□□□□□ -0.69
CD4-209ENST00000539492 ERBB4Q15303 1308 aa10.74□□□□□ -0.69
CD4-209ENST00000539492 UBN2Q6ZU65 1347 aa10.74□□□□□ -0.69
CD4-209ENST00000539492 FOXN1O15353 648 aa10.73□□□□□ -0.69
CD4-209ENST00000539492 GPTP24298 496 aa10.73□□□□□ -0.69
CD4-209ENST00000539492 VEGFBP49765 207 aa10.73□□□□□ -0.69
CD4-209ENST00000539492 EIF6P56537 245 aaKnown RBP10.73□□□□□ -0.69
CD4-209ENST00000539492 AIDAQ96BJ3 306 aa10.73□□□□□ -0.69
CD4-209ENST00000539492 PNNQ9H307 717 aaKnown RBP10.73□□□□□ -0.69
CD4-209ENST00000539492 MAPK8IP3Q9UPT6 1336 aa10.73□□□□□ -0.69
CD4-209ENST00000539492 NTSR2O95665 410 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 MYL6BP14649 208 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 LMOD1P29536 600 aaPredicted RBP10.72□□□□□ -0.69
CD4-209ENST00000539492 CTCFP49711 727 aaPredicted RBP10.72□□□□□ -0.69
CD4-209ENST00000539492 MAP1SQ66K74 1059 aaPredicted RBP10.72□□□□□ -0.69
CD4-209ENST00000539492 GIGYF2Q6Y7W6 1299 aaKnown RBP10.72□□□□□ -0.69
CD4-209ENST00000539492 ZNF34Q8IZ26 560 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 CNTROBQ8N137 903 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 RBM17Q96I25 401 aaKnown RBP10.72□□□□□ -0.69
CD4-209ENST00000539492 CRAMP1Q96RY5 1269 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 THUMPD2Q9BTF0 503 aaKnown RBP10.72□□□□□ -0.69
CD4-209ENST00000539492 ZBTB3Q9H5J0 574 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 PRDM10Q9NQV6 1147 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 THSD7BQ9C0I4 1608 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 TAF1P21675 1872 aa10.72□□□□□ -0.69
CD4-209ENST00000539492 POLR2AP24928 1970 aaKnown RBP10.72□□□□□ -0.69
CD4-209ENST00000539492 RASSF10A6NK89 507 aa10.71□□□□□ -0.69
CD4-209ENST00000539492 PPEF1O14829 653 aaPredicted RBP10.71□□□□□ -0.69
CD4-209ENST00000539492 PARP10Q53GL7 1025 aa10.71□□□□□ -0.69
CD4-209ENST00000539492 SUSD4Q5VX71 490 aa10.71□□□□□ -0.69
CD4-209ENST00000539492 PPP1R42Q7Z4L9 355 aa10.71□□□□□ -0.69
CD4-209ENST00000539492 LARGE2Q8N3Y3 721 aa10.71□□□□□ -0.69
CD4-209ENST00000539492 GJA3Q9Y6H8 435 aa10.71□□□□□ -0.69
CD4-209ENST00000539492 NIM1KQ8IY84 436 aa10.7□□□□□ -0.7
CD4-209ENST00000539492 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
CD4-209ENST00000539492 TSPYL4Q9UJ04 414 aa10.7□□□□□ -0.7
CD4-209ENST00000539492 SCNN1DP51172 638 aa10.69□□□□□ -0.7
CD4-209ENST00000539492 DEFB115Q30KQ5 88 aa10.69□□□□□ -0.7
CD4-209ENST00000539492 C3orf67Q6ZVT6 689 aa10.69□□□□□ -0.7
CD4-209ENST00000539492 LRP10Q7Z4F1 713 aa10.69□□□□□ -0.7
CD4-209ENST00000539492 NLRP3Q96P20 1036 aa10.69□□□□□ -0.7
CD4-209ENST00000539492 TMX4Q9H1E5 349 aaPredicted RBP10.69□□□□□ -0.7
CD4-209ENST00000539492 DDX21Q9NR30 783 aaKnown RBP eCLIP10.69□□□□□ -0.7
CD4-209ENST00000539492 BABAM1Q9NWV8 329 aa10.69□□□□□ -0.7
CD4-209ENST00000539492 ABT1Q9ULW3 272 aaKnown RBP10.69□□□□□ -0.7
CD4-209ENST00000539492 CASP8AP2Q9UKL3 1982 aa10.68□□□□□ -0.7
CD4-209ENST00000539492 ABCC4O15439 1325 aa10.68□□□□□ -0.7
CD4-209ENST00000539492 WDR33Q9C0J8 1336 aaKnown RBP10.68□□□□□ -0.7
CD4-209ENST00000539492 PPIP5K2O43314 1243 aa10.68□□□□□ -0.7
CD4-209ENST00000539492 EPS15P42566 896 aa10.68□□□□□ -0.7
CD4-209ENST00000539492 USP50Q70EL3 339 aaPredicted RBP10.68□□□□□ -0.7
CD4-209ENST00000539492 UTP14AQ9BVJ6 771 aaKnown RBP10.68□□□□□ -0.7
CD4-209ENST00000539492 VPS33BQ9H267 617 aa10.68□□□□□ -0.7
CD4-209ENST00000539492 ATP6V0A2Q9Y487 856 aa10.68□□□□□ -0.7
CD4-209ENST00000539492 LRRC37AA6NMS7 1700 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 DDX60Q8IY21 1712 aaKnown RBP10.67□□□□□ -0.7
CD4-209ENST00000539492 TCERG1O14776 1098 aaKnown RBP10.67□□□□□ -0.7
CD4-209ENST00000539492 EIF2S2P20042 333 aaKnown RBP10.67□□□□□ -0.7
CD4-209ENST00000539492 MAP2K1Q02750 393 aaPredicted RBP10.67□□□□□ -0.7
CD4-209ENST00000539492 LMOD3Q0VAK6 560 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 PDIA6Q15084 440 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 PROSER3Q2NL68 480 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 HSP90AB3PQ58FF7 597 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 SLC10A5Q5PT55 438 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 SLC51AQ86UW1 340 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 SUPT20HQ8NEM7 779 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 PDE4DIPQ5VU43 2346 aa10.67□□□□□ -0.7
CD4-209ENST00000539492 HSPA8P11142 646 aaKnown RBP10.66□□□□□ -0.7
CD4-209ENST00000539492 LBX1P52954 281 aa10.66□□□□□ -0.7
CD4-209ENST00000539492 RIPK4P57078 832 aa10.66□□□□□ -0.7
CD4-209ENST00000539492 AOC3Q16853 763 aa10.66□□□□□ -0.7
CD4-209ENST00000539492 RTFDC1Q9BY42 306 aaPredicted RBP10.66□□□□□ -0.7
CD4-209ENST00000539492 ADARB2Q9NS39 739 aaKnown RBP10.66□□□□□ -0.7
CD4-209ENST00000539492 CDHR2Q9BYE9 1310 aa10.65□□□□□ -0.7
CD4-209ENST00000539492 BBOX1O75936 387 aa10.65□□□□□ -0.7
CD4-209ENST00000539492 ANXA1P04083 346 aa10.65□□□□□ -0.7
CD4-209ENST00000539492 ECE1P42892 770 aa10.65□□□□□ -0.7
CD4-209ENST00000539492 CAPNS2Q96L46 248 aa10.65□□□□□ -0.7
CD4-209ENST00000539492 GPRC5DQ9NZD1 345 aa10.65□□□□□ -0.7
CD4-209ENST00000539492 ZNRF3Q9ULT6 936 aa10.65□□□□□ -0.7
CD4-209ENST00000539492 TMPOP42166 694 aaKnown RBP10.64□□□□□ -0.71
CD4-209ENST00000539492 FMR1Q06787 632 aaKnown RBP eCLIP10.64□□□□□ -0.71
CD4-209ENST00000539492 CXCL9Q07325 125 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 KIAA2012Q0VF49 1180 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 RALBP1Q15311 655 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 DPP8Q6V1X1 898 aaPredicted RBP10.64□□□□□ -0.71
CD4-209ENST00000539492 PAXIP1Q6ZW49 1069 aaPredicted RBP10.64□□□□□ -0.71
CD4-209ENST00000539492 DDX46Q7L014 1031 aaKnown RBP10.64□□□□□ -0.71
CD4-209ENST00000539492 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 NLRP10Q86W26 655 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 SP8Q8IXZ3 490 aa10.64□□□□□ -0.71
CD4-209ENST00000539492 MPNDQ8N594 471 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms