RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 DDX12PQ92771 950 aa12.3□□□□□ -0.44
CCDC144NL-203ENST00000539484 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
CCDC144NL-203ENST00000539484 COL5A3P25940 1745 aaPredicted RBP12.3□□□□□ -0.44
CCDC144NL-203ENST00000539484 MYH14Q7Z406 1995 aaKnown RBP12.3□□□□□ -0.44
CCDC144NL-203ENST00000539484 DPYSL4O14531 572 aa12.29□□□□□ -0.44
CCDC144NL-203ENST00000539484 MTHFSP49914 203 aa12.29□□□□□ -0.44
CCDC144NL-203ENST00000539484 ZNF516Q92618 1163 aa12.29□□□□□ -0.44
CCDC144NL-203ENST00000539484 SCN11AQ9UI33 1791 aa12.28□□□□□ -0.44
CCDC144NL-203ENST00000539484 RC3H1Q5TC82 1133 aaKnown RBP12.28□□□□□ -0.44
CCDC144NL-203ENST00000539484 CCDC87Q9NVE4 849 aa12.28□□□□□ -0.44
CCDC144NL-203ENST00000539484 PARP3Q9Y6F1 533 aa12.28□□□□□ -0.44
CCDC144NL-203ENST00000539484 CICQ96RK0 1608 aaPredicted RBP12.28□□□□□ -0.44
CCDC144NL-203ENST00000539484 SMAPO00193 183 aa12.27□□□□□ -0.45
CCDC144NL-203ENST00000539484 RPS6KA4O75676 772 aa12.27□□□□□ -0.45
CCDC144NL-203ENST00000539484 TGFB2P61812 414 aa12.27□□□□□ -0.45
CCDC144NL-203ENST00000539484 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
CCDC144NL-203ENST00000539484 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
CCDC144NL-203ENST00000539484 C4AP0C0L4 1744 aa12.27□□□□□ -0.45
CCDC144NL-203ENST00000539484 CNTNAP4Q9C0A0 1308 aa12.27□□□□□ -0.45
CCDC144NL-203ENST00000539484 KDRP35968 1356 aa12.27□□□□□ -0.45
CCDC144NL-203ENST00000539484 MAP3K7O43318 606 aa12.26□□□□□ -0.45
CCDC144NL-203ENST00000539484 PTCD1O75127 700 aaKnown RBP12.26□□□□□ -0.45
CCDC144NL-203ENST00000539484 SULT6B1Q6IMI4 303 aa12.26□□□□□ -0.45
CCDC144NL-203ENST00000539484 BCS1LQ9Y276 419 aa12.26□□□□□ -0.45
CCDC144NL-203ENST00000539484 ADCY9O60503 1353 aa12.26□□□□□ -0.45
CCDC144NL-203ENST00000539484 TSR1Q2NL82 804 aaKnown RBP12.25□□□□□ -0.45
CCDC144NL-203ENST00000539484 KDM6AO15550 1401 aaPredicted RBP12.25□□□□□ -0.45
CCDC144NL-203ENST00000539484 ARFGEF1Q9Y6D6 1849 aa12.25□□□□□ -0.45
CCDC144NL-203ENST00000539484 BRCA1P38398 1863 aaKnown RBP12.25□□□□□ -0.45
CCDC144NL-203ENST00000539484 GOLGB1Q14789 3259 aaKnown RBP12.24□□□□□ -0.45
CCDC144NL-203ENST00000539484 FCHSD2O94868 740 aa12.24□□□□□ -0.45
CCDC144NL-203ENST00000539484 GGCXP38435 758 aa12.24□□□□□ -0.45
CCDC144NL-203ENST00000539484 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
CCDC144NL-203ENST00000539484 AEBP1Q8IUX7 1158 aa12.24□□□□□ -0.45
CCDC144NL-203ENST00000539484 NFATC2IPQ8NCF5 419 aa12.24□□□□□ -0.45
CCDC144NL-203ENST00000539484 SLC4A9Q96Q91 983 aa12.24□□□□□ -0.45
CCDC144NL-203ENST00000539484 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
CCDC144NL-203ENST00000539484 PXDNLA1KZ92 1463 aa12.23□□□□□ -0.45
CCDC144NL-203ENST00000539484 A0A0G2JLW4 131 aa12.23□□□□□ -0.45
CCDC144NL-203ENST00000539484 GYS1P13807 737 aa12.23□□□□□ -0.45
CCDC144NL-203ENST00000539484 CRKLP46109 303 aaKnown RBP12.23□□□□□ -0.45
CCDC144NL-203ENST00000539484 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
CCDC144NL-203ENST00000539484 NKX2-3Q8TAU0 364 aa12.23□□□□□ -0.45
CCDC144NL-203ENST00000539484 C10orf71Q711Q0 1435 aa12.22□□□□□ -0.45
CCDC144NL-203ENST00000539484 HSPA6P17066 643 aa12.22□□□□□ -0.45
CCDC144NL-203ENST00000539484 NBR1Q14596 966 aa12.22□□□□□ -0.45
CCDC144NL-203ENST00000539484 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
CCDC144NL-203ENST00000539484 TJP1Q07157 1748 aa12.21□□□□□ -0.45
CCDC144NL-203ENST00000539484 ZPR1O75312 459 aa12.21□□□□□ -0.45
CCDC144NL-203ENST00000539484 DPEP1P16444 411 aa12.21□□□□□ -0.45
CCDC144NL-203ENST00000539484 AKAP4Q5JQC9 854 aa12.21□□□□□ -0.45
CCDC144NL-203ENST00000539484 IL13P35225 146 aa12.2□□□□□ -0.46
CCDC144NL-203ENST00000539484 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
CCDC144NL-203ENST00000539484 SBF1O95248 1867 aa12.19□□□□□ -0.46
CCDC144NL-203ENST00000539484 CCDC88AQ3V6T2 1871 aa12.19□□□□□ -0.46
CCDC144NL-203ENST00000539484 USP42Q9H9J4 1324 aaKnown RBP12.19□□□□□ -0.46
CCDC144NL-203ENST00000539484 AFDNP55196 1824 aaKnown RBP12.19□□□□□ -0.46
CCDC144NL-203ENST00000539484 RNF40O75150 1001 aa12.19□□□□□ -0.46
CCDC144NL-203ENST00000539484 PRSS12P56730 875 aa12.19□□□□□ -0.46
CCDC144NL-203ENST00000539484 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
CCDC144NL-203ENST00000539484 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
CCDC144NL-203ENST00000539484 HMOX1P09601 288 aa12.18□□□□□ -0.46
CCDC144NL-203ENST00000539484 APLP1P51693 650 aa12.18□□□□□ -0.46
CCDC144NL-203ENST00000539484 DALRD3Q5D0E6 543 aaKnown RBP12.18□□□□□ -0.46
CCDC144NL-203ENST00000539484 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
CCDC144NL-203ENST00000539484 TATDN2Q93075 761 aa12.18□□□□□ -0.46
CCDC144NL-203ENST00000539484 RNMTO43148 476 aaKnown RBP12.17□□□□□ -0.46
CCDC144NL-203ENST00000539484 DIAPH1O60610 1272 aaKnown RBP12.17□□□□□ -0.46
CCDC144NL-203ENST00000539484 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
CCDC144NL-203ENST00000539484 TMUB1Q9BVT8 246 aa12.17□□□□□ -0.46
CCDC144NL-203ENST00000539484 FAM198AQ9UFP1 575 aa12.17□□□□□ -0.46
CCDC144NL-203ENST00000539484 PNMA3Q9UL41 463 aa12.17□□□□□ -0.46
CCDC144NL-203ENST00000539484 NBPF26B4DH59 902 aa12.16□□□□□ -0.46
CCDC144NL-203ENST00000539484 TOMM70O94826 608 aa12.16□□□□□ -0.46
CCDC144NL-203ENST00000539484 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
CCDC144NL-203ENST00000539484 CC2D1BQ5T0F9 858 aaKnown RBP12.16□□□□□ -0.46
CCDC144NL-203ENST00000539484 C9orf131Q5VYM1 1079 aa12.16□□□□□ -0.46
CCDC144NL-203ENST00000539484 LGR6Q9HBX8 967 aa12.16□□□□□ -0.46
CCDC144NL-203ENST00000539484 KIF7Q2M1P5 1343 aa12.15□□□□□ -0.46
CCDC144NL-203ENST00000539484 SLC39A6Q13433 755 aa12.15□□□□□ -0.46
CCDC144NL-203ENST00000539484 USPL1Q5W0Q7 1092 aa12.15□□□□□ -0.46
CCDC144NL-203ENST00000539484 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
CCDC144NL-203ENST00000539484 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
CCDC144NL-203ENST00000539484 KDM2BQ8NHM5 1336 aa12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 POLRMTO00411 1230 aaKnown RBP12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 KCNA3P22001 575 aa12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 DDR1Q08345 913 aa12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 CNGB1Q14028 1251 aaPredicted RBP12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 NPM2Q86SE8 214 aaKnown RBP12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 RNF181Q9P0P0 153 aa12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 COL15A1P39059 1388 aa12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 MRC1P22897 1456 aa12.14□□□□□ -0.47
CCDC144NL-203ENST00000539484 SOS1Q07889 1333 aaPredicted RBP12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
CCDC144NL-203ENST00000539484 CHRNA5P30532 468 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms