RNA–Protein interactions for RNA: ENST00000539399.1

TM7SF3-207, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 553 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-207ENST00000539399 TRIM35Q9UPQ4 493 aa32.73■■■□□ 2.83
TM7SF3-207ENST00000539399 SNED1Q8TER0 1413 aa32.73■■■□□ 2.83
TM7SF3-207ENST00000539399 RPGRQ92834 1020 aaKnown RBP32.71■■■□□ 2.83
TM7SF3-207ENST00000539399 KRT24Q2M2I5 525 aa32.7■■■□□ 2.83
TM7SF3-207ENST00000539399 LAMB2P55268 1798 aa32.7■■■□□ 2.82
TM7SF3-207ENST00000539399 CHL1O00533 1208 aa32.69■■■□□ 2.82
TM7SF3-207ENST00000539399 HOXA10P31260 410 aaPredicted RBP32.69■■■□□ 2.82
TM7SF3-207ENST00000539399 C3orf67Q6ZVT6 689 aa32.69■■■□□ 2.82
TM7SF3-207ENST00000539399 ZNF541Q9H0D2 1346 aa32.69■■■□□ 2.82
TM7SF3-207ENST00000539399 PARP10Q53GL7 1025 aa32.68■■■□□ 2.82
TM7SF3-207ENST00000539399 PPP1R42Q7Z4L9 355 aa32.68■■■□□ 2.82
TM7SF3-207ENST00000539399 SYNE4Q8N205 404 aa32.68■■■□□ 2.82
TM7SF3-207ENST00000539399 LAS1LQ9Y4W2 734 aaKnown RBP32.68■■■□□ 2.82
TM7SF3-207ENST00000539399 POTEIP0CG38 1075 aa32.67■■■□□ 2.82
TM7SF3-207ENST00000539399 POTEJP0CG39 1038 aa32.67■■■□□ 2.82
TM7SF3-207ENST00000539399 IARSP41252 1262 aaKnown RBP32.66■■■□□ 2.82
TM7SF3-207ENST00000539399 IFFO2Q5TF58 517 aa32.66■■■□□ 2.82
TM7SF3-207ENST00000539399 L3MBTL3Q96JM7 780 aaPredicted RBP32.66■■■□□ 2.82
TM7SF3-207ENST00000539399 AIMP1Q12904 312 aaKnown RBP32.65■■■□□ 2.82
TM7SF3-207ENST00000539399 COPS6Q7L5N1 327 aa32.65■■■□□ 2.82
TM7SF3-207ENST00000539399 SLC51AQ86UW1 340 aa32.65■■■□□ 2.82
TM7SF3-207ENST00000539399 XAGE3Q8WTP9 111 aa32.65■■■□□ 2.82
TM7SF3-207ENST00000539399 JMYQ8N9B5 988 aa32.64■■■□□ 2.82
TM7SF3-207ENST00000539399 PSMD1Q99460 953 aa32.64■■■□□ 2.82
TM7SF3-207ENST00000539399 COL4A5P29400 1685 aa32.63■■■□□ 2.81
TM7SF3-207ENST00000539399 APAF1O14727 1248 aa32.63■■■□□ 2.81
TM7SF3-207ENST00000539399 CHADLQ6NUI6 762 aa32.63■■■□□ 2.81
TM7SF3-207ENST00000539399 RBM17Q96I25 401 aaKnown RBP32.63■■■□□ 2.81
TM7SF3-207ENST00000539399 CRAMP1Q96RY5 1269 aa32.63■■■□□ 2.81
TM7SF3-207ENST00000539399 UTP14AQ9BVJ6 771 aaKnown RBP32.63■■■□□ 2.81
TM7SF3-207ENST00000539399 PCNTO95613 3336 aa32.62■■■□□ 2.81
TM7SF3-207ENST00000539399 IQCA1LA6NCM1 817 aa32.62■■■□□ 2.81
TM7SF3-207ENST00000539399 CALD1Q05682 793 aaKnown RBP32.62■■■□□ 2.81
TM7SF3-207ENST00000539399 CC2D2BQ6DHV5 1058 aa32.62■■■□□ 2.81
TM7SF3-207ENST00000539399 DDX21Q9NR30 783 aaKnown RBP eCLIP32.62■■■□□ 2.81
TM7SF3-207ENST00000539399 PPEF1O14829 653 aaPredicted RBP32.61■■■□□ 2.81
TM7SF3-207ENST00000539399 MRS2Q9HD23 443 aa32.61■■■□□ 2.81
TM7SF3-207ENST00000539399 FZD9O00144 591 aa32.6■■■□□ 2.81
TM7SF3-207ENST00000539399 TCERG1O14776 1098 aaKnown RBP32.6■■■□□ 2.81
TM7SF3-207ENST00000539399 TAF1DQ9H5J8 278 aaPredicted RBP32.6■■■□□ 2.81
TM7SF3-207ENST00000539399 CHPF2Q9P2E5 772 aa32.6■■■□□ 2.81
TM7SF3-207ENST00000539399 CCDC184Q52MB2 194 aa32.59■■■□□ 2.81
TM7SF3-207ENST00000539399 SLC10A5Q5PT55 438 aa32.59■■■□□ 2.81
TM7SF3-207ENST00000539399 NLRP3Q96P20 1036 aa32.59■■■□□ 2.81
TM7SF3-207ENST00000539399 HSP90AB3PQ58FF7 597 aa32.58■■■□□ 2.81
TM7SF3-207ENST00000539399 NLRP10Q86W26 655 aa32.58■■■□□ 2.81
TM7SF3-207ENST00000539399 CFAP44Q96MT7 982 aa32.58■■■□□ 2.81
TM7SF3-207ENST00000539399 RNF123Q5XPI4 1314 aa32.57■■■□□ 2.8
TM7SF3-207ENST00000539399 TAF1P21675 1872 aa32.57■■■□□ 2.8
TM7SF3-207ENST00000539399 HDGFL1Q5TGJ6 251 aa32.57■■■□□ 2.8
TM7SF3-207ENST00000539399 ADAMTSL1Q8N6G6 1762 aa32.57■■■□□ 2.8
TM7SF3-207ENST00000539399 TCIRG1Q13488 830 aa32.56■■■□□ 2.8
TM7SF3-207ENST00000539399 LDHDQ86WU2 507 aa32.55■■■□□ 2.8
TM7SF3-207ENST00000539399 JDP2Q8WYK2 163 aa32.55■■■□□ 2.8
TM7SF3-207ENST00000539399 HACL1Q9UJ83 578 aa32.55■■■□□ 2.8
TM7SF3-207ENST00000539399 DDX60Q8IY21 1712 aaKnown RBP32.54■■■□□ 2.8
TM7SF3-207ENST00000539399 ABCC4O15439 1325 aa32.54■■■□□ 2.8
TM7SF3-207ENST00000539399 HOXB7P09629 217 aa32.54■■■□□ 2.8
TM7SF3-207ENST00000539399 GRIPAP1Q4V328 841 aa32.54■■■□□ 2.8
TM7SF3-207ENST00000539399 HCLS1P14317 486 aaPredicted RBP32.53■■■□□ 2.8
TM7SF3-207ENST00000539399 GPC2Q8N158 579 aa32.53■■■□□ 2.8
TM7SF3-207ENST00000539399 GNAI1P63096 354 aa32.52■■■□□ 2.8
TM7SF3-207ENST00000539399 EAPPQ56P03 285 aaPredicted RBP32.52■■■□□ 2.8
TM7SF3-207ENST00000539399 ZNF428Q96B54 188 aa32.52■■■□□ 2.8
TM7SF3-207ENST00000539399 MBIPQ9NS73 344 aa32.52■■■□□ 2.8
TM7SF3-207ENST00000539399 IFT57Q9NWB7 429 aa32.52■■■□□ 2.8
TM7SF3-207ENST00000539399 TRMT112Q9UI30 125 aaKnown RBP32.52■■■□□ 2.8
TM7SF3-207ENST00000539399 EPHX2P34913 555 aa32.51■■■□□ 2.79
TM7SF3-207ENST00000539399 DUSP27Q5VZP5 1158 aa32.51■■■□□ 2.79
TM7SF3-207ENST00000539399 LARGE2Q8N3Y3 721 aa32.51■■■□□ 2.79
TM7SF3-207ENST00000539399 DBF4Q9UBU7 674 aaPredicted RBP32.51■■■□□ 2.79
TM7SF3-207ENST00000539399 ATP6V0A2Q9Y487 856 aa32.51■■■□□ 2.79
TM7SF3-207ENST00000539399 LTBP1Q14766 1721 aa32.51■■■□□ 2.79
TM7SF3-207ENST00000539399 SH3TC1Q8TE82 1336 aa32.5■■■□□ 2.79
TM7SF3-207ENST00000539399 PLBD2Q8NHP8 589 aa32.49■■■□□ 2.79
TM7SF3-207ENST00000539399 CREBZFQ9NS37 354 aa32.49■■■□□ 2.79
TM7SF3-207ENST00000539399 PASKQ96RG2 1323 aa32.49■■■□□ 2.79
TM7SF3-207ENST00000539399 ZNF853P0CG23 659 aa32.48■■■□□ 2.79
TM7SF3-207ENST00000539399 EIF6P56537 245 aaKnown RBP32.48■■■□□ 2.79
TM7SF3-207ENST00000539399 GJA3Q9Y6H8 435 aa32.48■■■□□ 2.79
TM7SF3-207ENST00000539399 ANKRD13DQ6ZTN6 518 aa32.47■■■□□ 2.79
TM7SF3-207ENST00000539399 TMX4Q9H1E5 349 aaPredicted RBP32.46■■■□□ 2.79
TM7SF3-207ENST00000539399 CLEC11AQ9Y240 323 aa32.46■■■□□ 2.79
TM7SF3-207ENST00000539399 PPIP5K2O43314 1243 aa32.45■■■□□ 2.79
TM7SF3-207ENST00000539399 AOC3Q16853 763 aa32.45■■■□□ 2.79
TM7SF3-207ENST00000539399 HYPKQ9NX55 129 aa32.45■■■□□ 2.79
TM7SF3-207ENST00000539399 LRRC37AA6NMS7 1700 aa32.44■■■□□ 2.78
TM7SF3-207ENST00000539399 BBOX1O75936 387 aa32.44■■■□□ 2.78
TM7SF3-207ENST00000539399 ITGBL1O95965 494 aaPredicted RBP32.44■■■□□ 2.78
TM7SF3-207ENST00000539399 CCDC27Q2M243 656 aa32.44■■■□□ 2.78
TM7SF3-207ENST00000539399 PNMA8AQ86V59 439 aaPredicted RBP32.44■■■□□ 2.78
TM7SF3-207ENST00000539399 NIM1KQ8IY84 436 aa32.44■■■□□ 2.78
TM7SF3-207ENST00000539399 ISCA1Q9BUE6 129 aa32.44■■■□□ 2.78
TM7SF3-207ENST00000539399 ATP5J2-PTCD1G3V325 749 aa32.43■■■□□ 2.78
TM7SF3-207ENST00000539399 DDX46Q7L014 1031 aaKnown RBP32.43■■■□□ 2.78
TM7SF3-207ENST00000539399 SP8Q8IXZ3 490 aa32.42■■■□□ 2.78
TM7SF3-207ENST00000539399 MKRN1Q9UHC7 482 aaKnown RBP32.42■■■□□ 2.78
TM7SF3-207ENST00000539399 SCNN1DP51172 638 aa32.41■■■□□ 2.78
TM7SF3-207ENST00000539399 GRAPQ13588 217 aa32.41■■■□□ 2.78
TM7SF3-207ENST00000539399 NCBP3Q53F19 620 aaKnown RBP32.41■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms