RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 SPDYE1Q8NFV5 336 aaPredicted RBP8.3□□□□□ -1.08
USP30-210ENST00000539121 PNISRQ8TF01 805 aaKnown RBP8.3□□□□□ -1.08
USP30-210ENST00000539121 PSMD1Q99460 953 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 PRDM10Q9NQV6 1147 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 ZNF277Q9NRM2 450 aaPredicted RBP8.3□□□□□ -1.08
USP30-210ENST00000539121 MKRN1Q9UHC7 482 aaKnown RBP8.3□□□□□ -1.08
USP30-210ENST00000539121 HACL1Q9UJ83 578 aa8.3□□□□□ -1.08
USP30-210ENST00000539121 NEFMP07197 916 aa8.29□□□□□ -1.08
USP30-210ENST00000539121 GTF2E1P29083 439 aaPredicted RBP8.29□□□□□ -1.08
USP30-210ENST00000539121 HOXA10P31260 410 aaPredicted RBP8.29□□□□□ -1.08
USP30-210ENST00000539121 EPHX2P34913 555 aa8.29□□□□□ -1.08
USP30-210ENST00000539121 IARSP41252 1262 aaKnown RBP8.29□□□□□ -1.08
USP30-210ENST00000539121 CNGB1Q14028 1251 aaPredicted RBP8.29□□□□□ -1.08
USP30-210ENST00000539121 GPC2Q8N158 579 aa8.29□□□□□ -1.08
USP30-210ENST00000539121 SYNE4Q8N205 404 aa8.29□□□□□ -1.08
USP30-210ENST00000539121 IBTKQ9P2D0 1353 aaPredicted RBP8.28□□□□□ -1.08
USP30-210ENST00000539121 DCTN1Q14203 1278 aa8.28□□□□□ -1.08
USP30-210ENST00000539121 HLFQ16534 295 aa8.28□□□□□ -1.08
USP30-210ENST00000539121 JDP2Q8WYK2 163 aa8.28□□□□□ -1.08
USP30-210ENST00000539121 RIC1Q4ADV7 1423 aa8.28□□□□□ -1.08
USP30-210ENST00000539121 SNED1Q8TER0 1413 aa8.28□□□□□ -1.08
USP30-210ENST00000539121 MAP3K15Q6ZN16 1313 aa8.28□□□□□ -1.08
USP30-210ENST00000539121 ZNF541Q9H0D2 1346 aa8.28□□□□□ -1.08
USP30-210ENST00000539121 NUP98P52948 1817 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 RASSF10A6NK89 507 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 FOXN1O15353 648 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 CTCFP49711 727 aaPredicted RBP8.27□□□□□ -1.09
USP30-210ENST00000539121 EIF6P56537 245 aaKnown RBP8.27□□□□□ -1.09
USP30-210ENST00000539121 EAPPQ56P03 285 aaPredicted RBP8.27□□□□□ -1.09
USP30-210ENST00000539121 CNTROBQ8N137 903 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 AIDAQ96BJ3 306 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 VPS33BQ9H267 617 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 PNNQ9H307 717 aaKnown RBP8.27□□□□□ -1.09
USP30-210ENST00000539121 WBP1LQ9NX94 342 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 GTF3C3Q9Y5Q9 886 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 ADAMTSL1Q8N6G6 1762 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 ERBB4Q15303 1308 aa8.27□□□□□ -1.09
USP30-210ENST00000539121 LAMB4A4D0S4 1761 aa8.26□□□□□ -1.09
USP30-210ENST00000539121 FAM177BA6PVY3 158 aa8.26□□□□□ -1.09
USP30-210ENST00000539121 VEGFBP49765 207 aa8.26□□□□□ -1.09
USP30-210ENST00000539121 EIF4A1P60842 406 aaKnown RBP8.26□□□□□ -1.09
USP30-210ENST00000539121 DEFB115Q30KQ5 88 aa8.26□□□□□ -1.09
USP30-210ENST00000539121 OLFM4Q6UX06 510 aa8.26□□□□□ -1.09
USP30-210ENST00000539121 KIF6Q6ZMV9 814 aa8.26□□□□□ -1.09
USP30-210ENST00000539121 RPGRQ92834 1020 aaKnown RBP8.26□□□□□ -1.09
USP30-210ENST00000539121 CRAMP1Q96RY5 1269 aa8.26□□□□□ -1.09
USP30-210ENST00000539121 RNF123Q5XPI4 1314 aa8.26□□□□□ -1.09
USP30-210ENST00000539121 DLG5Q8TDM6 1919 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 PITPNM1O00562 1244 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 LMOD1P29536 600 aaPredicted RBP8.25□□□□□ -1.09
USP30-210ENST00000539121 MAP2K1Q02750 393 aaPredicted RBP8.25□□□□□ -1.09
USP30-210ENST00000539121 NFE2L2Q16236 605 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 PARP10Q53GL7 1025 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 GIGYF2Q6Y7W6 1299 aaKnown RBP8.25□□□□□ -1.09
USP30-210ENST00000539121 PPP1R42Q7Z4L9 355 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 NUTM1Q86Y26 1132 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 ZNF34Q8IZ26 560 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 RBM17Q96I25 401 aaKnown RBP8.25□□□□□ -1.09
USP30-210ENST00000539121 PLEKHF1Q96S99 279 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 TMX4Q9H1E5 349 aaPredicted RBP8.25□□□□□ -1.09
USP30-210ENST00000539121 MIS18AQ9NYP9 233 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 KDM3BQ7LBC6 1761 aa8.25□□□□□ -1.09
USP30-210ENST00000539121 ABCC12Q96J65 1359 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 NTSR2O95665 410 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 SLC10A5Q5PT55 438 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 SUSD4Q5VX71 490 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 MAP1SQ66K74 1059 aaPredicted RBP8.24□□□□□ -1.09
USP30-210ENST00000539121 TTLL7Q6ZT98 887 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 USP50Q70EL3 339 aaPredicted RBP8.24□□□□□ -1.09
USP30-210ENST00000539121 LARGE2Q8N3Y3 721 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 NGEFQ8N5V2 710 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 NLRP3Q96P20 1036 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 DDX21Q9NR30 783 aaKnown RBP eCLIP8.24□□□□□ -1.09
USP30-210ENST00000539121 BABAM1Q9NWV8 329 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 RRP7AQ9Y3A4 280 aaKnown RBP8.24□□□□□ -1.09
USP30-210ENST00000539121 UBN2Q6ZU65 1347 aa8.24□□□□□ -1.09
USP30-210ENST00000539121 MYL6BP14649 208 aa8.23□□□□□ -1.09
USP30-210ENST00000539121 ECE1P42892 770 aa8.23□□□□□ -1.09
USP30-210ENST00000539121 SCNN1DP51172 638 aa8.23□□□□□ -1.09
USP30-210ENST00000539121 NIM1KQ8IY84 436 aa8.23□□□□□ -1.09
USP30-210ENST00000539121 SUPT20HQ8NEM7 779 aa8.23□□□□□ -1.09
USP30-210ENST00000539121 RTFDC1Q9BY42 306 aaPredicted RBP8.23□□□□□ -1.09
USP30-210ENST00000539121 GJA3Q9Y6H8 435 aa8.23□□□□□ -1.09
USP30-210ENST00000539121 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
USP30-210ENST00000539121 TRPM7Q96QT4 1865 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 PPEF1O14829 653 aaPredicted RBP8.22□□□□□ -1.09
USP30-210ENST00000539121 BBOX1O75936 387 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 PRR29P0C7W0 189 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 GPTP24298 496 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 LBX1P52954 281 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 HSP90AB3PQ58FF7 597 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 LRP10Q7Z4F1 713 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 UTP14AQ9BVJ6 771 aaKnown RBP8.22□□□□□ -1.09
USP30-210ENST00000539121 ZBTB3Q9H5J0 574 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 ADARB2Q9NS39 739 aaKnown RBP8.22□□□□□ -1.09
USP30-210ENST00000539121 ABT1Q9ULW3 272 aaKnown RBP8.22□□□□□ -1.09
USP30-210ENST00000539121 ATP6V0A2Q9Y487 856 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 CDHR2Q9BYE9 1310 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 MAPK8IP3Q9UPT6 1336 aa8.22□□□□□ -1.09
USP30-210ENST00000539121 COL4A5P29400 1685 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms