RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 SLC35F4A4IF30 521 aa11.51□□□□□ -0.57
TUBD1-206ENST00000539018 PLEKHD1A6NEE1 506 aa11.51□□□□□ -0.57
TUBD1-206ENST00000539018 HIRAP54198 1017 aaPredicted RBP11.51□□□□□ -0.57
TUBD1-206ENST00000539018 SH3PXD2AQ5TCZ1 1133 aa11.51□□□□□ -0.57
TUBD1-206ENST00000539018 POTEAQ6S8J7 498 aa11.51□□□□□ -0.57
TUBD1-206ENST00000539018 MYO5CQ9NQX4 1742 aa11.51□□□□□ -0.57
TUBD1-206ENST00000539018 RAB3GAP2Q9H2M9 1393 aa11.51□□□□□ -0.57
TUBD1-206ENST00000539018 PDIA4P13667 645 aaKnown RBP11.5□□□□□ -0.57
TUBD1-206ENST00000539018 ITGAEP38570 1179 aa11.5□□□□□ -0.57
TUBD1-206ENST00000539018 TRAIPQ9BWF2 469 aa11.5□□□□□ -0.57
TUBD1-206ENST00000539018 ZDHHC3Q9NYG2 299 aa11.5□□□□□ -0.57
TUBD1-206ENST00000539018 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
TUBD1-206ENST00000539018 TATP17735 454 aaPredicted RBP11.49□□□□□ -0.57
TUBD1-206ENST00000539018 CCDC155Q8N6L0 562 aa11.49□□□□□ -0.57
TUBD1-206ENST00000539018 C1orf216Q8TAB5 229 aa11.49□□□□□ -0.57
TUBD1-206ENST00000539018 GAS2L1Q99501 681 aaPredicted RBP11.49□□□□□ -0.57
TUBD1-206ENST00000539018 HCN4Q9Y3Q4 1203 aa11.49□□□□□ -0.57
TUBD1-206ENST00000539018 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
TUBD1-206ENST00000539018 CAMSAP2Q08AD1 1489 aa11.49□□□□□ -0.57
TUBD1-206ENST00000539018 MSX1P28360 303 aa11.48□□□□□ -0.57
TUBD1-206ENST00000539018 TXLNAP40222 546 aa11.48□□□□□ -0.57
TUBD1-206ENST00000539018 MKNK1Q9BUB5 465 aa11.48□□□□□ -0.57
TUBD1-206ENST00000539018 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.48□□□□□ -0.57
TUBD1-206ENST00000539018 ABCC10Q5T3U5 1492 aa11.47□□□□□ -0.57
TUBD1-206ENST00000539018 PTCD1O75127 700 aaKnown RBP11.47□□□□□ -0.57
TUBD1-206ENST00000539018 F11P03951 625 aa11.47□□□□□ -0.57
TUBD1-206ENST00000539018 NGLY1Q96IV0 654 aa11.47□□□□□ -0.57
TUBD1-206ENST00000539018 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
TUBD1-206ENST00000539018 GPAMQ9HCL2 828 aa11.47□□□□□ -0.57
TUBD1-206ENST00000539018 KDM5BQ9UGL1 1544 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 GPATCH8Q9UKJ3 1502 aaKnown RBP11.46□□□□□ -0.57
TUBD1-206ENST00000539018 SHANK2Q9UPX8 1470 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 DAPK1P53355 1430 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 ROCK1Q13464 1354 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 ATP4AP20648 1035 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 C1orf53Q5VUE5 145 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 PHLDB3Q6NSJ2 640 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 ALDH16A1Q8IZ83 802 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 COL26A1Q96A83 441 aa11.46□□□□□ -0.57
TUBD1-206ENST00000539018 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
TUBD1-206ENST00000539018 RIPOR1Q6ZS17 1223 aa11.45□□□□□ -0.58
TUBD1-206ENST00000539018 CDC42BPBQ9Y5S2 1711 aa11.44□□□□□ -0.58
TUBD1-206ENST00000539018 BRD1O95696 1058 aa11.44□□□□□ -0.58
TUBD1-206ENST00000539018 BICDL1Q6ZP65 573 aa11.44□□□□□ -0.58
TUBD1-206ENST00000539018 PGBD3Q8N328 593 aa11.44□□□□□ -0.58
TUBD1-206ENST00000539018 PLEKHH2Q8IVE3 1493 aa11.44□□□□□ -0.58
TUBD1-206ENST00000539018 NAIPQ13075 1403 aa11.43□□□□□ -0.58
TUBD1-206ENST00000539018 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
TUBD1-206ENST00000539018 ARSJQ5FYB0 599 aaPredicted RBP11.43□□□□□ -0.58
TUBD1-206ENST00000539018 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
TUBD1-206ENST00000539018 RUBCNLQ9H714 662 aa11.43□□□□□ -0.58
TUBD1-206ENST00000539018 NXF1Q9UBU9 619 aaKnown RBP11.43□□□□□ -0.58
TUBD1-206ENST00000539018 CFDP1Q9UEE9 299 aaPredicted RBP11.43□□□□□ -0.58
TUBD1-206ENST00000539018 MTMR7Q9Y216 660 aa11.43□□□□□ -0.58
TUBD1-206ENST00000539018 ADGRL2O95490 1459 aa11.43□□□□□ -0.58
TUBD1-206ENST00000539018 ARAP3Q8WWN8 1544 aa11.42□□□□□ -0.58
TUBD1-206ENST00000539018 ITGA6P23229 1130 aa11.42□□□□□ -0.58
TUBD1-206ENST00000539018 RTN1Q16799 776 aa11.42□□□□□ -0.58
TUBD1-206ENST00000539018 CAPN12Q6ZSI9 719 aa11.42□□□□□ -0.58
TUBD1-206ENST00000539018 CRISPLD1Q9H336 500 aa11.42□□□□□ -0.58
TUBD1-206ENST00000539018 GPC6Q9Y625 555 aaPredicted RBP11.42□□□□□ -0.58
TUBD1-206ENST00000539018 TTC37Q6PGP7 1564 aa11.41□□□□□ -0.58
TUBD1-206ENST00000539018 H7C1W4 665 aa11.41□□□□□ -0.58
TUBD1-206ENST00000539018 SCNN1AP37088 669 aa11.41□□□□□ -0.58
TUBD1-206ENST00000539018 QTRT2Q9H974 415 aaKnown RBP11.41□□□□□ -0.58
TUBD1-206ENST00000539018 NAA30Q147X3 362 aaPredicted RBP11.4□□□□□ -0.58
TUBD1-206ENST00000539018 EFHC2Q5JST6 749 aa11.4□□□□□ -0.58
TUBD1-206ENST00000539018 MYO19Q96H55 970 aa11.4□□□□□ -0.58
TUBD1-206ENST00000539018 ZIC5Q96T25 663 aa11.4□□□□□ -0.58
TUBD1-206ENST00000539018 PTPRKQ15262 1439 aa11.4□□□□□ -0.58
TUBD1-206ENST00000539018 MAPKBP1O60336 1514 aa11.4□□□□□ -0.59
TUBD1-206ENST00000539018 ARHGAP5Q13017 1502 aa11.4□□□□□ -0.59
TUBD1-206ENST00000539018 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.4□□□□□ -0.59
TUBD1-206ENST00000539018 A0A1W2PNR3 127 aa11.39□□□□□ -0.59
TUBD1-206ENST00000539018 ABCC5O15440 1437 aa11.39□□□□□ -0.59
TUBD1-206ENST00000539018 ARID4AP29374 1257 aaPredicted RBP11.39□□□□□ -0.59
TUBD1-206ENST00000539018 LBRQ14739 615 aaKnown RBP11.39□□□□□ -0.59
TUBD1-206ENST00000539018 C16orf46Q6P387 395 aa11.39□□□□□ -0.59
TUBD1-206ENST00000539018 NPAS3Q8IXF0 933 aa11.39□□□□□ -0.59
TUBD1-206ENST00000539018 TRIM22Q8IYM9 498 aa11.39□□□□□ -0.59
TUBD1-206ENST00000539018 NUCKS1Q9H1E3 243 aaKnown RBP11.39□□□□□ -0.59
TUBD1-206ENST00000539018 NEUROD4Q9HD90 331 aa11.39□□□□□ -0.59
TUBD1-206ENST00000539018 CUEDC1Q9NWM3 386 aaPredicted RBP11.39□□□□□ -0.59
TUBD1-206ENST00000539018 SEPT3Q9UH03 358 aa11.39□□□□□ -0.59
TUBD1-206ENST00000539018 SAMD9LQ8IVG5 1584 aa11.38□□□□□ -0.59
TUBD1-206ENST00000539018 MAST1Q9Y2H9 1570 aa11.38□□□□□ -0.59
TUBD1-206ENST00000539018 HIF1AQ16665 826 aa11.38□□□□□ -0.59
TUBD1-206ENST00000539018 C7orf43Q8WVR3 580 aa11.38□□□□□ -0.59
TUBD1-206ENST00000539018 GMCL1Q96IK5 515 aa11.38□□□□□ -0.59
TUBD1-206ENST00000539018 GJA3Q9Y6H8 435 aa11.38□□□□□ -0.59
TUBD1-206ENST00000539018 CCDC141Q6ZP82 1450 aa11.38□□□□□ -0.59
TUBD1-206ENST00000539018 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
TUBD1-206ENST00000539018 CFAP74Q9C0B2 1584 aa11.37□□□□□ -0.59
TUBD1-206ENST00000539018 VEGFBP49765 207 aa11.37□□□□□ -0.59
TUBD1-206ENST00000539018 DBN1Q16643 649 aa11.37□□□□□ -0.59
TUBD1-206ENST00000539018 COX20Q5RI15 118 aa11.37□□□□□ -0.59
TUBD1-206ENST00000539018 ANKRD30AQ9BXX3 1397 aa11.37□□□□□ -0.59
TUBD1-206ENST00000539018 ABCA9Q8IUA7 1624 aa11.36□□□□□ -0.59
TUBD1-206ENST00000539018 CDC14CA4D256 554 aa11.36□□□□□ -0.59
TUBD1-206ENST00000539018 KCNA1Q09470 495 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms