RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 TMX4Q9H1E5 349 aaPredicted RBP12.86□□□□□ -0.35
CCDC170-202ENST00000537358 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
CCDC170-202ENST00000537358 GRIPAP1Q4V328 841 aa12.85□□□□□ -0.35
CCDC170-202ENST00000537358 PARP10Q53GL7 1025 aa12.85□□□□□ -0.35
CCDC170-202ENST00000537358 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
CCDC170-202ENST00000537358 NUTM1Q86Y26 1132 aa12.85□□□□□ -0.35
CCDC170-202ENST00000537358 C7orf43Q8WVR3 580 aa12.85□□□□□ -0.35
CCDC170-202ENST00000537358 RUNDC1Q96C34 613 aa12.85□□□□□ -0.35
CCDC170-202ENST00000537358 SCN4AP35499 1836 aa12.85□□□□□ -0.35
CCDC170-202ENST00000537358 HSP90AB3PQ58FF7 597 aa12.84□□□□□ -0.35
CCDC170-202ENST00000537358 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
CCDC170-202ENST00000537358 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
CCDC170-202ENST00000537358 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
CCDC170-202ENST00000537358 RIC1Q4ADV7 1423 aa12.84□□□□□ -0.35
CCDC170-202ENST00000537358 DDNO94850 711 aaPredicted RBP12.83□□□□□ -0.36
CCDC170-202ENST00000537358 HTRA3P83110 453 aa12.83□□□□□ -0.36
CCDC170-202ENST00000537358 CRY2Q49AN0 593 aa12.83□□□□□ -0.36
CCDC170-202ENST00000537358 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
CCDC170-202ENST00000537358 ZNF34Q8IZ26 560 aa12.83□□□□□ -0.36
CCDC170-202ENST00000537358 NLRP3Q96P20 1036 aa12.83□□□□□ -0.36
CCDC170-202ENST00000537358 ZNF277Q9NRM2 450 aaPredicted RBP12.83□□□□□ -0.36
CCDC170-202ENST00000537358 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
CCDC170-202ENST00000537358 ABCC12Q96J65 1359 aa12.82□□□□□ -0.36
CCDC170-202ENST00000537358 ANKRD36CQ5JPF3 1778 aa12.82□□□□□ -0.36
CCDC170-202ENST00000537358 IARSP41252 1262 aaKnown RBP12.82□□□□□ -0.36
CCDC170-202ENST00000537358 SUSD4Q5VX71 490 aa12.82□□□□□ -0.36
CCDC170-202ENST00000537358 CHADLQ6NUI6 762 aa12.82□□□□□ -0.36
CCDC170-202ENST00000537358 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
CCDC170-202ENST00000537358 PSMD1Q99460 953 aa12.82□□□□□ -0.36
CCDC170-202ENST00000537358 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
CCDC170-202ENST00000537358 RNF123Q5XPI4 1314 aa12.82□□□□□ -0.36
CCDC170-202ENST00000537358 UBN2Q6ZU65 1347 aa12.82□□□□□ -0.36
CCDC170-202ENST00000537358 POTECB2RU33 542 aa12.81□□□□□ -0.36
CCDC170-202ENST00000537358 HOXA10P31260 410 aaPredicted RBP12.81□□□□□ -0.36
CCDC170-202ENST00000537358 NECTIN2Q92692 538 aa12.81□□□□□ -0.36
CCDC170-202ENST00000537358 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
CCDC170-202ENST00000537358 CRAMP1Q96RY5 1269 aa12.81□□□□□ -0.36
CCDC170-202ENST00000537358 PPEF1O14829 653 aaPredicted RBP12.8□□□□□ -0.36
CCDC170-202ENST00000537358 NTSR2O95665 410 aa12.8□□□□□ -0.36
CCDC170-202ENST00000537358 EIF6P56537 245 aaKnown RBP12.8□□□□□ -0.36
CCDC170-202ENST00000537358 AIMP1Q12904 312 aaKnown RBP12.8□□□□□ -0.36
CCDC170-202ENST00000537358 OLFM4Q6UX06 510 aa12.8□□□□□ -0.36
CCDC170-202ENST00000537358 LDHDQ86WU2 507 aa12.8□□□□□ -0.36
CCDC170-202ENST00000537358 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
CCDC170-202ENST00000537358 HACL1Q9UJ83 578 aa12.8□□□□□ -0.36
CCDC170-202ENST00000537358 CHL1O00533 1208 aa12.79□□□□□ -0.36
CCDC170-202ENST00000537358 ANXA1P04083 346 aa12.79□□□□□ -0.36
CCDC170-202ENST00000537358 HOXB7P09629 217 aa12.79□□□□□ -0.36
CCDC170-202ENST00000537358 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
CCDC170-202ENST00000537358 PDIA6Q15084 440 aa12.79□□□□□ -0.36
CCDC170-202ENST00000537358 EAPPQ56P03 285 aaPredicted RBP12.79□□□□□ -0.36
CCDC170-202ENST00000537358 COPS6Q7L5N1 327 aa12.79□□□□□ -0.36
CCDC170-202ENST00000537358 XAGE3Q8WTP9 111 aa12.79□□□□□ -0.36
CCDC170-202ENST00000537358 DDX21Q9NR30 783 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC170-202ENST00000537358 CLEC11AQ9Y240 323 aa12.79□□□□□ -0.36
CCDC170-202ENST00000537358 FZD9O00144 591 aa12.78□□□□□ -0.36
CCDC170-202ENST00000537358 LMOD1P29536 600 aaPredicted RBP12.78□□□□□ -0.36
CCDC170-202ENST00000537358 PROSER3Q2NL68 480 aa12.78□□□□□ -0.36
CCDC170-202ENST00000537358 HDGFL1Q5TGJ6 251 aa12.78□□□□□ -0.36
CCDC170-202ENST00000537358 PNMA8AQ86V59 439 aaPredicted RBP12.78□□□□□ -0.36
CCDC170-202ENST00000537358 GPC2Q8N158 579 aa12.78□□□□□ -0.36
CCDC170-202ENST00000537358 LARGE2Q8N3Y3 721 aa12.78□□□□□ -0.36
CCDC170-202ENST00000537358 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
CCDC170-202ENST00000537358 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
CCDC170-202ENST00000537358 TRMT112Q9UI30 125 aaKnown RBP12.78□□□□□ -0.36
CCDC170-202ENST00000537358 ADAMTS8Q9UP79 889 aa12.78□□□□□ -0.36
CCDC170-202ENST00000537358 ZNF541Q9H0D2 1346 aa12.78□□□□□ -0.36
CCDC170-202ENST00000537358 TCERG1O14776 1098 aaKnown RBP12.77□□□□□ -0.37
CCDC170-202ENST00000537358 EPHX2P34913 555 aa12.77□□□□□ -0.37
CCDC170-202ENST00000537358 TCIRG1Q13488 830 aa12.77□□□□□ -0.37
CCDC170-202ENST00000537358 SLC10A5Q5PT55 438 aa12.77□□□□□ -0.37
CCDC170-202ENST00000537358 LRP10Q7Z4F1 713 aa12.77□□□□□ -0.37
CCDC170-202ENST00000537358 SUPT20HQ8NEM7 779 aa12.77□□□□□ -0.37
CCDC170-202ENST00000537358 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
CCDC170-202ENST00000537358 DBF4Q9UBU7 674 aaPredicted RBP12.77□□□□□ -0.37
CCDC170-202ENST00000537358 TRIM35Q9UPQ4 493 aa12.77□□□□□ -0.37
CCDC170-202ENST00000537358 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
CCDC170-202ENST00000537358 NLRP10Q86W26 655 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 VPS33BQ9H267 617 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 HYPKQ9NX55 129 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 GJA3Q9Y6H8 435 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 SH3TC1Q8TE82 1336 aa12.76□□□□□ -0.37
CCDC170-202ENST00000537358 PPIP5K2O43314 1243 aa12.75□□□□□ -0.37
CCDC170-202ENST00000537358 BBOX1O75936 387 aa12.75□□□□□ -0.37
CCDC170-202ENST00000537358 POTEIP0CG38 1075 aa12.75□□□□□ -0.37
CCDC170-202ENST00000537358 POTEJP0CG39 1038 aa12.75□□□□□ -0.37
CCDC170-202ENST00000537358 LAMB2P55268 1798 aa12.75□□□□□ -0.37
CCDC170-202ENST00000537358 ANKRD13DQ6ZTN6 518 aa12.75□□□□□ -0.37
CCDC170-202ENST00000537358 PLBD2Q8NHP8 589 aa12.75□□□□□ -0.37
CCDC170-202ENST00000537358 ATP6V0A2Q9Y487 856 aa12.75□□□□□ -0.37
CCDC170-202ENST00000537358 ABCC4O15439 1325 aa12.74□□□□□ -0.37
CCDC170-202ENST00000537358 HCLS1P14317 486 aaPredicted RBP12.74□□□□□ -0.37
CCDC170-202ENST00000537358 GNAI1P63096 354 aa12.74□□□□□ -0.37
CCDC170-202ENST00000537358 KRT24Q2M2I5 525 aa12.74□□□□□ -0.37
CCDC170-202ENST00000537358 DUSP27Q5VZP5 1158 aa12.74□□□□□ -0.37
CCDC170-202ENST00000537358 DPP8Q6V1X1 898 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms