RNA–Protein interactions for RNA: ENST00000537103.2

IFT88-207, Transcript of intraflagellar transport 88, humanhuman

TSL 5

Gene IFT88, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-207ENST00000537103 TM4SF1P30408 202 aa8.39□□□□□ -1.07
IFT88-207ENST00000537103 RFC4P35249 363 aa8.39□□□□□ -1.07
IFT88-207ENST00000537103 FLIIQ13045 1269 aa8.39□□□□□ -1.07
IFT88-207ENST00000537103 GIGYF2Q6Y7W6 1299 aaKnown RBP8.39□□□□□ -1.07
IFT88-207ENST00000537103 LAS1LQ9Y4W2 734 aaKnown RBP8.39□□□□□ -1.07
IFT88-207ENST00000537103 ALDH1L1O75891 902 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 AAMPQ13685 434 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 KSR2Q6VAB6 950 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 COL23A1Q86Y22 540 aaPredicted RBP8.38□□□□□ -1.07
IFT88-207ENST00000537103 RETREG2Q8NC44 543 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 CHMP4BQ9H444 224 aaKnown RBP8.38□□□□□ -1.07
IFT88-207ENST00000537103 NUP98P52948 1817 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 SPDYE2BA6NHP3 402 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 SPDYE6P0CI01 402 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 IRF5Q13568 498 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 SPDYE2Q495Y8 402 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
IFT88-207ENST00000537103 ZNF34Q8IZ26 560 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 TSR2Q969E8 191 aaKnown RBP8.38□□□□□ -1.07
IFT88-207ENST00000537103 ISCA1Q9BUE6 129 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 MIS18AQ9NYP9 233 aa8.38□□□□□ -1.07
IFT88-207ENST00000537103 KIAA1551Q9HCM1 1747 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 GYS1P13807 737 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 POLD1P28340 1107 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 RARSP54136 660 aaKnown RBP8.37□□□□□ -1.07
IFT88-207ENST00000537103 CDHR2Q9BYE9 1310 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 RTL9Q8NET4 1388 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 TRIM66O15016 1216 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 A1BGP04217 495 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 SLC10A5Q5PT55 438 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.37□□□□□ -1.07
IFT88-207ENST00000537103 METTL22Q9BUU2 404 aaPredicted RBP8.37□□□□□ -1.07
IFT88-207ENST00000537103 CHPF2Q9P2E5 772 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 CD2APQ9Y5K6 639 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 UTYO14607 1347 aa8.37□□□□□ -1.07
IFT88-207ENST00000537103 DSG3P32926 999 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 TCIRG1Q13488 830 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 GSE1Q14687 1217 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 E2F4Q16254 413 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 CCDC191Q8NCU4 936 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 YTHDC1Q96MU7 727 aaKnown RBP8.36□□□□□ -1.07
IFT88-207ENST00000537103 SPON1Q9HCB6 807 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 KLRG2A4D1S0 409 aaPredicted RBP8.36□□□□□ -1.07
IFT88-207ENST00000537103 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 ANKRD13DQ6ZTN6 518 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 PPP1R42Q7Z4L9 355 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 TSPYL6Q8N831 410 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 PLA2G12BQ9BX93 195 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 BCL2L12Q9HB09 334 aa8.36□□□□□ -1.07
IFT88-207ENST00000537103 CCT4P50991 539 aaKnown RBP8.35□□□□□ -1.07
IFT88-207ENST00000537103 ABCC4O15439 1325 aa8.35□□□□□ -1.07
IFT88-207ENST00000537103 ADCY9O60503 1353 aa8.35□□□□□ -1.07
IFT88-207ENST00000537103 CANXP27824 592 aaKnown RBP8.35□□□□□ -1.07
IFT88-207ENST00000537103 TGFB2P61812 414 aa8.35□□□□□ -1.07
IFT88-207ENST00000537103 NEXNQ0ZGT2 675 aa8.35□□□□□ -1.07
IFT88-207ENST00000537103 LINS1Q8NG48 757 aa8.35□□□□□ -1.07
IFT88-207ENST00000537103 XAGE3Q8WTP9 111 aa8.35□□□□□ -1.07
IFT88-207ENST00000537103 AFDNP55196 1824 aaKnown RBP8.34□□□□□ -1.07
IFT88-207ENST00000537103 COPS6Q7L5N1 327 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 TMC4Q7Z404 712 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 FBXW7Q969H0 707 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 CDCA7LQ96GN5 454 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 PRAMEF22A3QJZ6 481 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 A6NJR5 290 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 POLRMTO00411 1230 aaKnown RBP8.34□□□□□ -1.07
IFT88-207ENST00000537103 CENPBP07199 599 aaPredicted RBP8.34□□□□□ -1.07
IFT88-207ENST00000537103 PDE3AQ14432 1141 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 RBM26Q5T8P6 1007 aaKnown RBP8.34□□□□□ -1.07
IFT88-207ENST00000537103 DCAF8Q5TAQ9 597 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 INTS3Q68E01 1043 aaKnown RBP8.34□□□□□ -1.07
IFT88-207ENST00000537103 DNAAF4Q8WXU2 420 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 SSH1Q8WYL5 1049 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 PARP3Q9Y6F1 533 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 LRRC37AA6NMS7 1700 aa8.34□□□□□ -1.07
IFT88-207ENST00000537103 DDX60Q8IY21 1712 aaKnown RBP8.34□□□□□ -1.07
IFT88-207ENST00000537103 PCCAP05165 728 aaPredicted RBP8.33□□□□□ -1.08
IFT88-207ENST00000537103 EIF2S2P20042 333 aaKnown RBP8.33□□□□□ -1.08
IFT88-207ENST00000537103 PTGER2P43116 358 aa8.33□□□□□ -1.08
IFT88-207ENST00000537103 R3HDM1Q15032 1099 aaKnown RBP8.33□□□□□ -1.08
IFT88-207ENST00000537103 USPL1Q5W0Q7 1092 aa8.33□□□□□ -1.08
IFT88-207ENST00000537103 DHX37Q8IY37 1157 aaKnown RBP8.33□□□□□ -1.08
IFT88-207ENST00000537103 ST5P78524 1137 aa8.33□□□□□ -1.08
IFT88-207ENST00000537103 ZKSCAN2Q63HK3 967 aa8.33□□□□□ -1.08
IFT88-207ENST00000537103 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
IFT88-207ENST00000537103 BRIP1Q9BX63 1249 aa8.33□□□□□ -1.08
IFT88-207ENST00000537103 SMC4Q9NTJ3 1288 aa8.33□□□□□ -1.08
IFT88-207ENST00000537103 KRT24Q2M2I5 525 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 TPTE2Q6XPS3 522 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 RIC3Q7Z5B4 369 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 RCAN3Q9UKA8 241 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 NTSR2O95665 410 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 PDE6BP35913 854 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 PROSER3Q2NL68 480 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 BEND3Q5T5X7 828 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 STYK1Q6J9G0 422 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 ATF7IPQ6VMQ6 1270 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 NLRP10Q86W26 655 aa8.32□□□□□ -1.08
IFT88-207ENST00000537103 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
IFT88-207ENST00000537103 UTP14AQ9BVJ6 771 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms