RNA–Protein interactions for RNA: ENST00000536688.5

RFX4-204, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 2,186 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-204ENST00000536688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.91□□□□□ -0.5
RFX4-204ENST00000536688 SASH3O75995 380 aa11.91□□□□□ -0.5
RFX4-204ENST00000536688 TADA2BQ86TJ2 420 aa11.91□□□□□ -0.5
RFX4-204ENST00000536688 TBC1D22AQ8WUA7 517 aa11.91□□□□□ -0.5
RFX4-204ENST00000536688 FUT8Q9BYC5 575 aa11.91□□□□□ -0.5
RFX4-204ENST00000536688 CLSTN2Q9H4D0 955 aa11.91□□□□□ -0.5
RFX4-204ENST00000536688 ARHGAP5Q13017 1502 aa11.9□□□□□ -0.5
RFX4-204ENST00000536688 ADGRL3Q9HAR2 1447 aa11.9□□□□□ -0.5
RFX4-204ENST00000536688 ATP10DQ9P241 1426 aa11.9□□□□□ -0.5
RFX4-204ENST00000536688 MAP2K7O14733 419 aa11.9□□□□□ -0.5
RFX4-204ENST00000536688 NRDCO43847 1150 aa11.9□□□□□ -0.5
RFX4-204ENST00000536688 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.5
RFX4-204ENST00000536688 ERC1Q8IUD2 1116 aa11.9□□□□□ -0.5
RFX4-204ENST00000536688 CCDC150Q8NCX0 1101 aa11.9□□□□□ -0.5
RFX4-204ENST00000536688 ZCCHC17Q9NP64 241 aaKnown RBP11.9□□□□□ -0.5
RFX4-204ENST00000536688 BSDC1Q9NW68 430 aaPredicted RBP11.9□□□□□ -0.5
RFX4-204ENST00000536688 GOLIM4O00461 696 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 NPHP1O15259 732 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 C11orf91Q3C1V1 193 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 LRCH2Q5VUJ6 765 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 PPP1R13BQ96KQ4 1090 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 MSH6P52701 1360 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 NPHP3Q7Z494 1330 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 ABCA9Q8IUA7 1624 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 GOLGA6L19H0YKK7 550 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 KRT85P78386 507 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 BRD3Q15059 726 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 C16orf71Q8IYS4 520 aaPredicted RBP11.89□□□□□ -0.51
RFX4-204ENST00000536688 HNRNPLLQ8WVV9 542 aaKnown RBP11.89□□□□□ -0.51
RFX4-204ENST00000536688 DNAAF4Q8WXU2 420 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
RFX4-204ENST00000536688 SMC3Q9UQE7 1217 aa11.89□□□□□ -0.51
RFX4-204ENST00000536688 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
RFX4-204ENST00000536688 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 IQCB1Q15051 598 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 E2F4Q16254 413 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 E4F1Q66K89 784 aaPredicted RBP11.88□□□□□ -0.51
RFX4-204ENST00000536688 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 VAMP4O75379 141 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 DNM1Q05193 864 aaKnown RBP11.88□□□□□ -0.51
RFX4-204ENST00000536688 JMYQ8N9B5 988 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 RABGGTAQ92696 567 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 SCAND2PQ9GZW5 306 aaPredicted RBP11.88□□□□□ -0.51
RFX4-204ENST00000536688 TRMT1Q9NXH9 659 aaKnown RBP11.88□□□□□ -0.51
RFX4-204ENST00000536688 PALD1Q9ULE6 856 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 LIMCH1Q9UPQ0 1083 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 MTMR6Q9Y217 621 aa11.88□□□□□ -0.51
RFX4-204ENST00000536688 TTC21AQ8NDW8 1320 aa11.87□□□□□ -0.51
RFX4-204ENST00000536688 SRGAP3O43295 1099 aa11.87□□□□□ -0.51
RFX4-204ENST00000536688 PPFIA4O75335 1185 aa11.87□□□□□ -0.51
RFX4-204ENST00000536688 ERCC3P19447 782 aa11.87□□□□□ -0.51
RFX4-204ENST00000536688 TUBB4BP68371 445 aa11.87□□□□□ -0.51
RFX4-204ENST00000536688 LRRN4CLQ8ND94 238 aa11.87□□□□□ -0.51
RFX4-204ENST00000536688 EFCAB6Q5THR3 1501 aa11.87□□□□□ -0.51
RFX4-204ENST00000536688 EIF3JO75822 258 aaKnown RBP11.86□□□□□ -0.51
RFX4-204ENST00000536688 SMC2O95347 1197 aa11.86□□□□□ -0.51
RFX4-204ENST00000536688 HSPA4P34932 840 aa11.86□□□□□ -0.51
RFX4-204ENST00000536688 PDE1AP54750 535 aa11.86□□□□□ -0.51
RFX4-204ENST00000536688 DNAJC21Q5F1R6 531 aaKnown RBP11.86□□□□□ -0.51
RFX4-204ENST00000536688 TTC14Q96N46 770 aa11.86□□□□□ -0.51
RFX4-204ENST00000536688 CTAGE5O15320 804 aa11.86□□□□□ -0.51
RFX4-204ENST00000536688 SEC31AO94979 1220 aaKnown RBP11.86□□□□□ -0.51
RFX4-204ENST00000536688 CDC42BPGQ6DT37 1551 aa11.86□□□□□ -0.51
RFX4-204ENST00000536688 OTUD7AQ8TE49 926 aaPredicted RBP11.86□□□□□ -0.51
RFX4-204ENST00000536688 ARHGEF40Q8TER5 1519 aa11.86□□□□□ -0.51
RFX4-204ENST00000536688 LIG1P18858 919 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 EVCP57679 992 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 PSME1Q06323 249 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 APOBRQ0VD83 1088 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 RSRC2Q7L4I2 434 aaKnown RBP11.85□□□□□ -0.51
RFX4-204ENST00000536688 ZSCAN31Q96LW9 406 aaPredicted RBP11.85□□□□□ -0.51
RFX4-204ENST00000536688 MPHOSPH8Q99549 860 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 SETBP1Q9Y6X0 1596 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 POTEB2H3BUK9 544 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 CHMLP26374 656 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 FCHSD1Q86WN1 690 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 SGSM3Q96HU1 749 aa11.85□□□□□ -0.51
RFX4-204ENST00000536688 SH2B1Q9NRF2 756 aaPredicted RBP11.85□□□□□ -0.51
RFX4-204ENST00000536688 NRXN1Q9ULB1 1477 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 KLHL33A6NCF5 533 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 H3BQF6 201 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 ARID5BQ14865 1188 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 CEP85Q6P2H3 762 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 DNAJC25Q9H1X3 360 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 PDRG1Q9NUG6 133 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 KIAA0232Q92628 1395 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 HMMRO75330 724 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 STX1AQ16623 288 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 LONRF2Q1L5Z9 754 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.84□□□□□ -0.51
RFX4-204ENST00000536688 NBPF11Q86T75 865 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 PRAM1Q96QH2 718 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 ANO2Q9NQ90 1003 aa11.84□□□□□ -0.51
RFX4-204ENST00000536688 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
RFX4-204ENST00000536688 PDCP20941 246 aa11.83□□□□□ -0.52
RFX4-204ENST00000536688 SSR1P43307 286 aaKnown RBP11.83□□□□□ -0.52
RFX4-204ENST00000536688 USP5P45974 858 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms