RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZBTB3Q9H5J0 574 aa17.11■□□□□ 0.33
TNFRSF1A-207ENST00000535958 GJA3Q9Y6H8 435 aa17.11■□□□□ 0.33
TNFRSF1A-207ENST00000535958 NUP98P52948 1817 aa17.11■□□□□ 0.33
TNFRSF1A-207ENST00000535958 IBTKQ9P2D0 1353 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1A-207ENST00000535958 FZD9O00144 591 aa17.1■□□□□ 0.33
TNFRSF1A-207ENST00000535958 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
TNFRSF1A-207ENST00000535958 CRY2Q49AN0 593 aa17.1■□□□□ 0.33
TNFRSF1A-207ENST00000535958 LARGE2Q8N3Y3 721 aa17.1■□□□□ 0.33
TNFRSF1A-207ENST00000535958 RIC1Q4ADV7 1423 aa17.1■□□□□ 0.33
TNFRSF1A-207ENST00000535958 PPEF1O14829 653 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF1A-207ENST00000535958 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-207ENST00000535958 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
TNFRSF1A-207ENST00000535958 PPP1R42Q7Z4L9 355 aa17.09■□□□□ 0.33
TNFRSF1A-207ENST00000535958 ABT1Q9ULW3 272 aaKnown RBP17.09■□□□□ 0.33
TNFRSF1A-207ENST00000535958 ERBB4Q15303 1308 aa17.08■□□□□ 0.32
TNFRSF1A-207ENST00000535958 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
TNFRSF1A-207ENST00000535958 FOXN1O15353 648 aa17.08■□□□□ 0.32
TNFRSF1A-207ENST00000535958 CTCFP49711 727 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-207ENST00000535958 MAP1SQ66K74 1059 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF1A-207ENST00000535958 CNTROBQ8N137 903 aa17.08■□□□□ 0.32
TNFRSF1A-207ENST00000535958 ITGBL1O95965 494 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-207ENST00000535958 VEGFBP49765 207 aa17.07■□□□□ 0.32
TNFRSF1A-207ENST00000535958 PARP10Q53GL7 1025 aa17.07■□□□□ 0.32
TNFRSF1A-207ENST00000535958 PAXIP1Q6ZW49 1069 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF1A-207ENST00000535958 NIM1KQ8IY84 436 aa17.07■□□□□ 0.32
TNFRSF1A-207ENST00000535958 THUMPD2Q9BTF0 503 aaKnown RBP17.07■□□□□ 0.32
TNFRSF1A-207ENST00000535958 TSPYL4Q9UJ04 414 aa17.07■□□□□ 0.32
TNFRSF1A-207ENST00000535958 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
TNFRSF1A-207ENST00000535958 UBN2Q6ZU65 1347 aa17.06■□□□□ 0.32
TNFRSF1A-207ENST00000535958 HOXA10P31260 410 aaPredicted RBP17.06■□□□□ 0.32
TNFRSF1A-207ENST00000535958 DEFB115Q30KQ5 88 aa17.06■□□□□ 0.32
TNFRSF1A-207ENST00000535958 NLRP3Q96P20 1036 aa17.06■□□□□ 0.32
TNFRSF1A-207ENST00000535958 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
TNFRSF1A-207ENST00000535958 PPIP5K2O43314 1243 aa17.05■□□□□ 0.32
TNFRSF1A-207ENST00000535958 SUSD4Q5VX71 490 aa17.05■□□□□ 0.32
TNFRSF1A-207ENST00000535958 GIGYF2Q6Y7W6 1299 aaKnown RBP17.05■□□□□ 0.32
TNFRSF1A-207ENST00000535958 CRAMP1Q96RY5 1269 aa17.05■□□□□ 0.32
TNFRSF1A-207ENST00000535958 RASSF10A6NK89 507 aa17.04■□□□□ 0.32
TNFRSF1A-207ENST00000535958 NTSR2O95665 410 aa17.04■□□□□ 0.32
TNFRSF1A-207ENST00000535958 EIF2S2P20042 333 aaKnown RBP17.04■□□□□ 0.32
TNFRSF1A-207ENST00000535958 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
TNFRSF1A-207ENST00000535958 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
TNFRSF1A-207ENST00000535958 MAP2K1Q02750 393 aaPredicted RBP17.03■□□□□ 0.32
TNFRSF1A-207ENST00000535958 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
TNFRSF1A-207ENST00000535958 ZNF34Q8IZ26 560 aa17.03■□□□□ 0.32
TNFRSF1A-207ENST00000535958 UTP14AQ9BVJ6 771 aaKnown RBP17.03■□□□□ 0.32
TNFRSF1A-207ENST00000535958 DDX21Q9NR30 783 aaKnown RBP eCLIP17.03■□□□□ 0.32
TNFRSF1A-207ENST00000535958 HSP90AB3PQ58FF7 597 aa17.02■□□□□ 0.32
TNFRSF1A-207ENST00000535958 USP50Q70EL3 339 aaPredicted RBP17.02■□□□□ 0.32
TNFRSF1A-207ENST00000535958 SUPT20HQ8NEM7 779 aa17.02■□□□□ 0.32
TNFRSF1A-207ENST00000535958 BEGAINQ9BUH8 593 aa17.02■□□□□ 0.32
TNFRSF1A-207ENST00000535958 WDR33Q9C0J8 1336 aaKnown RBP17.01■□□□□ 0.31
TNFRSF1A-207ENST00000535958 ECE1P42892 770 aa17.01■□□□□ 0.31
TNFRSF1A-207ENST00000535958 GRM1Q13255 1194 aa17.01■□□□□ 0.31
TNFRSF1A-207ENST00000535958 AOC3Q16853 763 aa17.01■□□□□ 0.31
TNFRSF1A-207ENST00000535958 WBP1LQ9NX94 342 aa17.01■□□□□ 0.31
TNFRSF1A-207ENST00000535958 EPS15P42566 896 aa17■□□□□ 0.31
TNFRSF1A-207ENST00000535958 SCNN1DP51172 638 aa17■□□□□ 0.31
TNFRSF1A-207ENST00000535958 LBX1P52954 281 aa17■□□□□ 0.31
TNFRSF1A-207ENST00000535958 RIPK4P57078 832 aa17■□□□□ 0.31
TNFRSF1A-207ENST00000535958 VPS33BQ9H267 617 aa17■□□□□ 0.31
TNFRSF1A-207ENST00000535958 ATP6V0A2Q9Y487 856 aa17■□□□□ 0.31
TNFRSF1A-207ENST00000535958 COL4A5P29400 1685 aa17■□□□□ 0.31
TNFRSF1A-207ENST00000535958 ABCC4O15439 1325 aa16.99■□□□□ 0.31
TNFRSF1A-207ENST00000535958 LTBP1Q14766 1721 aa16.99■□□□□ 0.31
TNFRSF1A-207ENST00000535958 DPP8Q6V1X1 898 aaPredicted RBP16.99■□□□□ 0.31
TNFRSF1A-207ENST00000535958 ANKRD36CQ5JPF3 1778 aa16.99■□□□□ 0.31
TNFRSF1A-207ENST00000535958 AIMP1Q12904 312 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-207ENST00000535958 C3orf67Q6ZVT6 689 aa16.98■□□□□ 0.31
TNFRSF1A-207ENST00000535958 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-207ENST00000535958 ADARB2Q9NS39 739 aaKnown RBP16.98■□□□□ 0.31
TNFRSF1A-207ENST00000535958 BABAM1Q9NWV8 329 aa16.98■□□□□ 0.31
TNFRSF1A-207ENST00000535958 ANXA1P04083 346 aa16.97■□□□□ 0.31
TNFRSF1A-207ENST00000535958 NECTIN2Q92692 538 aa16.97■□□□□ 0.31
TNFRSF1A-207ENST00000535958 BCL2L13Q9BXK5 485 aa16.97■□□□□ 0.31
TNFRSF1A-207ENST00000535958 ZNRF3Q9ULT6 936 aa16.97■□□□□ 0.31
TNFRSF1A-207ENST00000535958 BBOX1O75936 387 aa16.96■□□□□ 0.31
TNFRSF1A-207ENST00000535958 MPNDQ8N594 471 aa16.96■□□□□ 0.31
TNFRSF1A-207ENST00000535958 CAPNS2Q96L46 248 aa16.96■□□□□ 0.31
TNFRSF1A-207ENST00000535958 GPRC5DQ9NZD1 345 aa16.96■□□□□ 0.31
TNFRSF1A-207ENST00000535958 TRMT112Q9UI30 125 aaKnown RBP16.96■□□□□ 0.31
TNFRSF1A-207ENST00000535958 TRPM7Q96QT4 1865 aa16.96■□□□□ 0.31
TNFRSF1A-207ENST00000535958 HSPA8P11142 646 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 RALBP1Q15311 655 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 PROSER3Q2NL68 480 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 SLC10A5Q5PT55 438 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 SLC51AQ86UW1 340 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 XAGE3Q8WTP9 111 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 CDHR2Q9BYE9 1310 aa16.95■□□□□ 0.3
TNFRSF1A-207ENST00000535958 TRAF5O00463 557 aa16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 HCLS1P14317 486 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 GMPSP49915 693 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 TNIP1Q15025 636 aa16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 PDIA6Q15084 440 aa16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 CYP4F22Q6NT55 531 aa16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 NLRP10Q86W26 655 aa16.94■□□□□ 0.3
TNFRSF1A-207ENST00000535958 SP8Q8IXZ3 490 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms